From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp1 ([2001:41d0:2:bcc0::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms0.migadu.com with LMTPS id kMz1OT2h02AX7AAAgWs5BA (envelope-from ) for ; Wed, 23 Jun 2021 23:01:49 +0200 Received: from aspmx1.migadu.com ([2001:41d0:2:bcc0::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp1 with LMTPS id WJqMNT2h02DiFgAAbx9fmQ (envelope-from ) for ; Wed, 23 Jun 2021 21:01:49 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 3BDB91C250 for ; Wed, 23 Jun 2021 23:01:49 +0200 (CEST) Received: from localhost ([::1]:52472 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1lwA0K-00031Y-A1 for larch@yhetil.org; Wed, 23 Jun 2021 17:01:48 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:52950) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1lwA08-00031K-AP for guix-devel@gnu.org; Wed, 23 Jun 2021 17:01:36 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]:51120) by eggs.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1lwA07-00027l-8G; Wed, 23 Jun 2021 17:01:35 -0400 Received: from [2a01:e0a:1d:7270:af76:b9b:ca24:c465] (port=35226 helo=ribbon) by fencepost.gnu.org with esmtpsa (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1lwA06-00038t-Ul; Wed, 23 Jun 2021 17:01:35 -0400 From: =?utf-8?Q?Ludovic_Court=C3=A8s?= To: Ricardo Wurmus Subject: Re: python-distlib vs python-distlib/next References: <87mtrjy0cq.fsf@mdc-berlin.de> X-URL: http://www.fdn.fr/~lcourtes/ X-Revolutionary-Date: 5 Messidor an 229 de la =?utf-8?Q?R=C3=A9volution?= X-PGP-Key-ID: 0x090B11993D9AEBB5 X-PGP-Key: http://www.fdn.fr/~lcourtes/ludovic.asc X-PGP-Fingerprint: 3CE4 6455 8A84 FDC6 9DB4 0CFB 090B 1199 3D9A EBB5 X-OS: x86_64-pc-linux-gnu Date: Wed, 23 Jun 2021 23:01:32 +0200 In-Reply-To: <87mtrjy0cq.fsf@mdc-berlin.de> (Ricardo Wurmus's message of "Mon, 21 Jun 2021 12:32:21 +0200") Message-ID: <87bl7wwb0z.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.2 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-BeenThere: guix-devel@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: guix-devel@gnu.org Errors-To: guix-devel-bounces+larch=yhetil.org@gnu.org Sender: "Guix-devel" X-Migadu-Flow: FLOW_IN ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1624482109; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding: in-reply-to:in-reply-to:references:references:list-id:list-help: list-unsubscribe:list-subscribe:list-post; bh=YTaytJArZYasOEnqzv2dacXR2aCJxSSXI6ZqZYtqHVA=; b=c08YXL+qYmtt7ZaWdTM/IbEpMnl7lQ/xS7fbqZ0IpEO7TxtAUodY0sm/9RAUzsTWQB+Zdh dR9W1VMhK6qZtikl4sP5TYLnwBndAMLXei5mkPpqzTp+OVqU43RIZXLszSV1p6G9YPF3Mq T5nvvkPnPOqDBRRvI6juXpD+YaTtrkMlhKslxt4AJW3T79r3LMBctRRjlpEK3JlHO4SwnP 1jepOc+H+GWt5oZVDv0/+H5wsGlQAuMQJGRnGAelNmDy4KsaJR/gh14WTmFiaxYsdVvdu6 egB/dqRC/X6KxOHmxxk6eQ7SvvpK71G5o7G+zeeNCYlUhuqQTLncMcD6l/KqVA== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1624482109; a=rsa-sha256; cv=none; b=maFh/UPUc8R0bnLNP06kELZkNY5Ap9oWHhtpfzEcdSVAPsb5ofNw/E8irVls7sbDo6Jncx wW13Zvpzk/aWyvFs88RL0hDLZj5mfy/APHrygY+fuWs+TcEK4hYg8rBG1/0KSn174l5pHa n/fNunblRZ07kyCJI8nU3RmbMzSCU7JxHZHk062PuE/HqwZWtosrmJ6s4fyf98dLCx3HBp GikmlY9f53bWGHQa3wEc1VB/UqTM4e1q9Rewo6ryazK6QZ4WnhIcrAXJ42yA1jOIULFhB1 jsA5pnnC1ElN3y3iI6up/B7sKccWgkosmfhALz6g6C1Jf+T8Fev+FbSy9v/+Og== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=none; spf=pass (aspmx1.migadu.com: domain of guix-devel-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-devel-bounces@gnu.org X-Migadu-Spam-Score: -2.93 Authentication-Results: aspmx1.migadu.com; dkim=none; dmarc=pass (policy=none) header.from=gnu.org; spf=pass (aspmx1.migadu.com: domain of guix-devel-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-devel-bounces@gnu.org X-Migadu-Queue-Id: 3BDB91C250 X-Spam-Score: -2.93 X-Migadu-Scanner: scn0.migadu.com X-TUID: 8qmYFb9Db9yn Hi, Ricardo Wurmus skribis: > This broke the *installation* (not the build) of other packages such > as python-pygenometracks. The reason is that the closure of > python-pygenometracks would include both python-distlib and=20 > python-distlib/next. Guix would then prevent the installation of > python-pygenometracks into user profiles: > >> guix package: error: profile contains conflicting entries for >> python-distlib >> guix package: error: first entry: python-distlib@0.3.1 >> /gnu/store/mypg42bass5n61liwyq7llrwla4w8bny-python-distlib-0.3.1 >> guix package: error: ... propagated from python-virtualenv@20.2.1 >> guix package: error: ... propagated from python-tox@3.20.0 >> guix package: error: ... propagated from >> python-argh@0.26.2-1.dcd3253 >> guix package: error: ... propagated from >> python-gffutils@0.9-1.4034c54 >> guix package: error: ... propagated from >> python-pygenometracks@3.3 >> guix package: error: second entry: python-distlib@0.3.0 >> /gnu/store/fwya18dazamh2cjdkgh5wpxi7lqn4fcm-python-distlib-0.3.0 >> guix package: error: ... propagated from >> python-sortedcontainers@2.1.0 >> guix package: error: ... propagated from >> python-intervaltree@3.0.2 >> guix package: error: ... propagated from >> python-pygenometracks@3.3 > > We can=E2=80=99t easily detect these problems because they only strike at > installation time. This means that we may not do partial upgrades=20 > in the Python world due to the quirks of propagation. There may be > other packages that are broken in a similar fashion right now. =E2=80=98guix lint=E2=80=99 catches that: --8<---------------cut here---------------start------------->8--- $ guix lint -c profile-collisions python-pygenometracks=20 gnu/packages/bioinformatics.scm:11896:2: python-pygenometracks@3.3: propaga= ted inputs python-distlib@0.3.1 and python-distlib@0.3.0 collide --8<---------------cut here---------------end--------------->8--- The Data Service should notice these new warnings, though I was unable to find it, and doesn=E2=80=99t seem to have this warning. We definitely need automated feedback before a patch can be applied. Another thing we could do is have =E2=80=98guix lint=E2=80=99 check the dep= endents of a package in addition to the package itself in some cases (maybe just for =E2=80=98profile-collisions=E2=80=99?). Thoughts? Ludo=E2=80=99.