From mboxrd@z Thu Jan  1 00:00:00 1970
From: ludo@gnu.org (Ludovic =?utf-8?Q?Court=C3=A8s?=)
Subject: Re: [PATCH] Add cufflinks.
Date: Wed, 16 Sep 2015 19:10:08 +0200
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In-Reply-To: <idjpp1i74gl.fsf@bimsb-sys02.mdc-berlin.net> (Ricardo Wurmus's
	message of "Wed, 16 Sep 2015 17:45:46 +0200")
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To: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
Cc: guix-devel <guix-devel@gnu.org>

Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> skribis:

> From e8186326701df11ee4bdb22d4717cf4b8c27dd50 Mon Sep 17 00:00:00 2001
> From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
> Date: Wed, 16 Sep 2015 17:42:41 +0200
> Subject: [PATCH] gnu: Add cufflinks.
>
> * gnu/packages/bioinformatics.scm (boost-1.55, cufflinks): New
>   variables.

[...]

> +(define boost-1.55
> +  (package (inherit boost)

I would keep it next to =E2=80=98boost=E2=80=99.


[...]

> +          (lambda* (#:key inputs #:allow-other-keys)
> +            ;; The includes for "eigen" are located in a subdirectory.
> +            (setenv "CPATH" (string-append (assoc-ref inputs "eigen")
> +                                           "/include/eigen3/" ":"
> +                                           (or (getenv "CPATH") "")))

It should be using =E2=80=98pkg-config eigen3 --cflags=E2=80=99, but pkg-co=
nfig is
missing.

Could you check if adding pkg-config makes this hack unnecessary?

Otherwise LGTM.

Thanks,
Ludo=E2=80=99.