From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp1 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id QDBGIf6bpV+hfAAA0tVLHw (envelope-from ) for ; Fri, 06 Nov 2020 18:54:54 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp1 with LMTPS id gDb6HP6bpV8CMQAAbx9fmQ (envelope-from ) for ; Fri, 06 Nov 2020 18:54:54 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 14F9894042B for ; Fri, 6 Nov 2020 18:54:54 +0000 (UTC) Received: from localhost ([::1]:49328 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kb6su-0003m5-V7 for larch@yhetil.org; Fri, 06 Nov 2020 13:54:52 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]:59888) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kb6r5-0000p9-U2 for guix-devel@gnu.org; Fri, 06 Nov 2020 13:52:59 -0500 Received: from mail-wm1-x331.google.com ([2a00:1450:4864:20::331]:32817) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kb6r3-00087P-SN; Fri, 06 Nov 2020 13:52:59 -0500 Received: by mail-wm1-x331.google.com with SMTP id p19so1527856wmg.0; Fri, 06 Nov 2020 10:52:56 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:subject:in-reply-to:references:date:message-id:mime-version; bh=aSG8T+T1+WQFJUY/lcCIiFKiB1rzerdqfdgGvqC6z8s=; b=M0i3cwz6gWOuVPvyIZ0yJzFX/0LYlZLfasYKYlIgMNPR/SlkH74MAQ0fP2/RdLzR9T AB1DnzS9uiFTQxzEQBD/SncpVftzAx6my5LRdXREcVwu8XF8kBVdufaKL11Di6d6P/Os 6ZwUJ8QJ4vli80s5c9u85ZH5UfNzkIa/HiH/bKGjKqW57V9EgLvsDg2g7uaWAjOOTpbO CKlNvLO+Kyah7ZfLj54NU1R36gbe0QQ/te7vrhUJB2yLFRuKtkLKfVra80xEY52Zh9KU rhWWqE9eJhUgJfgXF8ravnM4gMUsNDidzDjQaDs8v35jXsnCor5Kiz5+fGjQn5+Km4O7 DJRA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:subject:in-reply-to:references:date :message-id:mime-version; bh=aSG8T+T1+WQFJUY/lcCIiFKiB1rzerdqfdgGvqC6z8s=; b=Qv1665aoTge/9FbDWtFwbb+VV+akI3iWFziWwdzuYgxhVLS+T0iV/n1YSfe0Le/WZm h9S35U12RK0rtAjhk3Q0gI33U7W24CjwoqGqN+HxJKvwonOW/gKtg7/UTeOMtmkSl/tN A6KXEAj0LWXmIPxPmhVBJ+LGbPVI/qs5LHFc9F0KME+JWrjzrhlmA7ieXUOZIiGYy2PG NUSVVGx45fN0dRxTxPge0/SBihI1yVPactBe20pxC0TStsgr91GLMLyaQ0iUOfawYdXi Ibq6Il6RRj/gPx45WMe34OsTen12btyTjvAqeDqzzt6hhqP+TADMpcnCHqjwkJLCUwHX zrjA== X-Gm-Message-State: AOAM531ENxCZJVDh+PPdoe015yuBrkaLC8Zoj2poAR75QHwvKd6pk5Pi 1vpWrW4otlo2zi9p6jKjVrk9Ndy/fKQD8A== X-Google-Smtp-Source: ABdhPJyAB5cFLgEb42tfv6vwsjlc+5aSL3IWFoGHMOwgxO98RPVaYgEJjs8DoeR9CPJ0Yrx25uQ4ww== X-Received: by 2002:a1c:5585:: with SMTP id j127mr1074119wmb.90.1604688775247; Fri, 06 Nov 2020 10:52:55 -0800 (PST) Received: from lili ([88.126.110.68]) by smtp.gmail.com with ESMTPSA id g186sm3517599wma.1.2020.11.06.10.52.54 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Fri, 06 Nov 2020 10:52:54 -0800 (PST) From: zimoun To: Roel Janssen , guix-devel@gnu.org Subject: Re: =?utf-8?Q?=E2=80=9Cguix?= pack -RR =?utf-8?Q?r=E2=80=9C?= fails? In-Reply-To: References: <87v9eldm7p.fsf@gmail.com> Date: Fri, 06 Nov 2020 19:52:22 +0100 Message-ID: <86blganwrd.fsf@gmail.com> MIME-Version: 1.0 Content-Type: text/plain Received-SPF: pass client-ip=2a00:1450:4864:20::331; envelope-from=zimon.toutoune@gmail.com; helo=mail-wm1-x331.google.com X-detected-operating-system: by eggs.gnu.org: No matching host in p0f cache. That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: guix-devel@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+larch=yhetil.org@gnu.org Sender: "Guix-devel" X-Scanner: ns3122888.ip-94-23-21.eu Authentication-Results: aspmx1.migadu.com; dkim=pass header.d=gmail.com header.s=20161025 header.b=M0i3cwz6; dmarc=pass (policy=none) header.from=gmail.com; spf=pass (aspmx1.migadu.com: domain of guix-devel-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-devel-bounces@gnu.org X-Spam-Score: -0.71 X-TUID: yNpkPCeX6duW Hi Roel, On Thu, 05 Nov 2020 at 13:38, Roel Janssen wrote: >> What do I miss? > > Perhaps completely misguided, but is this inside an SGE or SLURM job? > I've seen similar errors when starting R on a cluster node with too > little memory allocated to the compute job. In my experience you need > at least 2G of memory available. Thank you for sharing. I am on the master node and launched as a regular user (not tried as root). If I understand correctly, my issue should come from the kernel which is too old and/or not compiled with the correct options. All the best, simon