From mboxrd@z Thu Jan 1 00:00:00 1970 From: Pjotr Prins Subject: [PATCH] gnu: Add slurm. Date: Sat, 13 Feb 2016 18:22:51 +0100 Message-ID: <56bf666b.QSlgSx8eQoW3JJme%pjotr.public12@thebird.nl> Mime-Version: 1.0 Content-Type: text/plain; charset=iso-8859-1 Content-Transfer-Encoding: quoted-printable Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:50997) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1aUdv9-0004rw-Ov for guix-devel@gnu.org; Sat, 13 Feb 2016 12:23:49 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1aUdv8-0006gS-5i for guix-devel@gnu.org; Sat, 13 Feb 2016 12:23:47 -0500 Received: from mail.thebird.nl ([95.154.246.10]:47667) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1aUdv7-0006gN-SJ for guix-devel@gnu.org; Sat, 13 Feb 2016 12:23:46 -0500 List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org To: guix-devel@gnu.org * gnu/packages/parallel.scm (slurm): New variable. * gnu/packages/patches/slurm-wlm-configure-remove-nonfree-contribs.patch:= New file. * gnu/packages/parallel.scm (parallel): Introduce license name space. --- gnu-system.am | 1 + gnu/packages/parallel.scm | 67 ++++++++++++++++= ++++-- .../slurm-configure-remove-nonfree-contribs.patch | 43 ++++++++++++++ 3 files changed, 106 insertions(+), 5 deletions(-) create mode 100644 gnu/packages/patches/slurm-configure-remove-nonfree-c= ontribs.patch diff --git a/gnu-system.am b/gnu-system.am index fd9795e..ac4b241 100644 --- a/gnu-system.am +++ b/gnu-system.am @@ -702,6 +702,7 @@ dist_patch_DATA =3D \ gnu/packages/patches/slim-session.patch \ gnu/packages/patches/slim-config.patch \ gnu/packages/patches/slim-sigusr1.patch \ + gnu/packages/patches/slurm-configure-remove-nonfree-contribs.patch = \ gnu/packages/patches/soprano-find-clucene.patch \ gnu/packages/patches/sudo-CVE-2015-5602.patch \ gnu/packages/patches/superlu-dist-scotchmetis.patch \ diff --git a/gnu/packages/parallel.scm b/gnu/packages/parallel.scm index 8f63bda..a52e554 100644 --- a/gnu/packages/parallel.scm +++ b/gnu/packages/parallel.scm @@ -2,6 +2,7 @@ ;;; Copyright =A9 2013,2014 Eric Bavier ;;; Copyright =A9 2015 Mark H Weaver ;;; Copyright =A9 2015 Efraim Flashner +;;; Copyright =A9 2016 Pjotr Prins ;;; ;;; This file is part of GNU Guix. ;;; @@ -19,12 +20,18 @@ ;;; along with GNU Guix. If not, see . =20 (define-module (gnu packages parallel) - #:use-module (guix packages) - #:use-module (guix licenses) - #:use-module (guix download) #:use-module (guix build-system gnu) + #:use-module (guix download) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix packages) #:use-module (gnu packages) - #:use-module (gnu packages perl)) + #:use-module (gnu packages admin) + #:use-module (gnu packages autotools) + #:use-module (gnu packages linux) + #:use-module (gnu packages perl) + #:use-module (gnu packages python) + #:use-module (gnu packages tcl) + #:use-module (gnu packages tls)) =20 (define-public parallel (package @@ -46,4 +53,54 @@ "GNU Parallel is a tool for executing shell jobs in parallel using = one or more computers. Jobs can consist of single commands or of scripts and they are executed on lists of files, hosts, users or other items.") - (license gpl3+))) + (license license:gpl3+))) + +(define-public slurm + (package + (name "slurm") + (version "15.08.7.1") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/SchedMD/slurm/archiv= e/slurm-" + (string-join (string-split version #\.) = "-") ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1rmi35l4img00dr4vic8cv8s7b6n1yx1mkq2s7kjf5hvqdh6s2ki")) + (patches (list (search-patch "slurm-wlm-configure-remove-non= free-contribs.patch"))) + (modules '((guix build utils))) + (snippet + '(begin + (delete-file-recursively "contribs") + #t)))) + (inputs `(("openssl" ,openssl) + ("munge" ,munge) + ("perl" ,perl) + ("expect" ,expect) + ("python" ,python) + ("linux-pam" , linux-pam))) + (native-inputs + `(("autoconf" ,autoconf))) + (build-system gnu-build-system) + (arguments + `(#:configure-flags '("--enable-pam") + #:phases + (modify-phases %standard-phases + (add-before + 'configure 'autogen + (lambda _ (zero? (system* "autoconf")))) ; configure.ac was patc= hed + (add-before + 'autogen 'rewrite-usr-bin + (lambda* (#:key inputs #:allow-other-keys) + ;; replace python call with python3 + (substitute* "./doc/html/shtml2html.py"=20 + (("#!/usr/bin/env python") + (string-append "#!" (which "python3")))) + (substitute* "src/common/env.c" + (("/usr/bin/env") (which "env")))))))) + (home-page "http://slurm.schedmd.com/") + (synopsis "Workload manager for cluster computing") + (description + "Fault-tolerant and highly scalable cluster management and job +scheduling system for large and small clusters.") + (license license:gpl2+))) diff --git a/gnu/packages/patches/slurm-configure-remove-nonfree-contribs= .patch b/gnu/packages/patches/slurm-configure-remove-nonfree-contribs.pat= ch new file mode 100644 index 0000000..b63d5bb --- /dev/null +++ b/gnu/packages/patches/slurm-configure-remove-nonfree-contribs.patch @@ -0,0 +1,43 @@ +From 53eda9102b969a4be2882cea4befee03591a7436 Mon Sep 17 00:00:00 2001 +From: Pjotr Prins +Date: Fri, 12 Feb 2016 12:43:33 +0100 +Subject: [PATCH] Remove contribs + +--- + configure.ac | 20 -------------------- + 1 file changed, 20 deletions(-) + +diff --git a/configure.ac b/configure.ac +index fedf354..e010732 100644 +--- a/configure.ac ++++ b/configure.ac +@@ -438,26 +438,6 @@ dnl All slurm Makefiles: + AC_CONFIG_FILES([Makefile + config.xml + auxdir/Makefile +- contribs/Makefile +- contribs/cray/Makefile +- contribs/cray/csm/Makefile +- contribs/lua/Makefile +- contribs/mic/Makefile +- contribs/pam/Makefile +- contribs/pam_slurm_adopt/Makefile +- contribs/perlapi/Makefile +- contribs/perlapi/libslurm/Makefile +- contribs/perlapi/libslurm/perl/Makefile.PL +- contribs/perlapi/libslurmdb/Makefile +- contribs/perlapi/libslurmdb/perl/Makefile.PL +- contribs/torque/Makefile +- contribs/phpext/Makefile +- contribs/phpext/slurm_php/config.m4 +- contribs/sgather/Makefile +- contribs/sgi/Makefile +- contribs/sjobexit/Makefile +- contribs/slurmdb-direct/Makefile +- contribs/pmi2/Makefile + doc/Makefile + doc/man/Makefile + doc/man/man1/Makefile +--=20 +2.1.4 + --=20 2.1.4