From: Ben Woodcroft <b.woodcroft@uq.edu.au>
To: "guix-devel@gnu.org" <guix-devel@gnu.org>
Subject: [PATCH] Update biopython to 1.66.
Date: Wed, 11 Nov 2015 21:28:00 +1000 [thread overview]
Message-ID: <56432640.8050904@uq.edu.au> (raw)
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I also figure with the shiny new updaters it might make things easier if
pypi is used instead of the biopython site.
thanks.
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From bb6e9ba482ea8602afafd9f6a310a8053544bd80 Mon Sep 17 00:00:00 2001
From: Ben Woodcroft <donttrustben@gmail.com>
Date: Wed, 11 Nov 2015 21:27:02 +1000
Subject: [PATCH] gnu: python-biopython, python2-biopython: Update to 1.66.
* gnu/packages/bioinformatics.scm (python-biopython, python2-biopython): Update to 1.66.
[source]: Use PyPi instead of biopython.org.
---
gnu/packages/bioinformatics.scm | 9 ++++-----
1 file changed, 4 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index f13e405..706a871 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -348,15 +348,14 @@ provide a coordinated and extensible framework to do computational biology.")
(define-public python-biopython
(package
(name "python-biopython")
- (version "1.65")
+ (version "1.66")
(source (origin
(method url-fetch)
- (uri (string-append
- "http://biopython.org/DIST/biopython-"
- version ".tar.gz"))
+ ;; use PyPi rather than biopython.org to ease updating
+ (uri (pypi-uri "biopython" version))
(sha256
(base32
- "13m8s9jkrw40zvdp1rl709n6lmgdh4f52aann7gzr6sfp0fwhg26"))))
+ "1gdv92593klimg22icf5j9by7xiq86jnwzkpz4abaa05ylkdf6hp"))))
(build-system python-build-system)
(inputs
`(("python-numpy" ,python-numpy)))
--
2.5.0
next reply other threads:[~2015-11-11 11:28 UTC|newest]
Thread overview: 5+ messages / expand[flat|nested] mbox.gz Atom feed top
2015-11-11 11:28 Ben Woodcroft [this message]
2015-12-09 21:23 ` [PATCH] Update biopython to 1.66 Ludovic Courtès
2015-12-10 9:31 ` Ricardo Wurmus
2015-12-10 11:04 ` Ben Woodcroft
2015-12-10 13:18 ` Ricardo Wurmus
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