From mboxrd@z Thu Jan  1 00:00:00 1970
From: Ben Woodcroft <b.woodcroft@uq.edu.au>
Subject: Re: 01/02: gnu: blast+: Update to 2.6.0.
Date: Sat, 8 Jul 2017 14:14:23 +1000
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To: Leo Famulari <leo@famulari.name>
Cc: guix-devel@gnu.org



On 07/07/17 09:39, Leo Famulari wrote:
> On Fri, Jul 07, 2017 at 09:33:26AM +1000, Ben Woodcroft wrote:
>> Hi Ludo,
>>
>>
>> On 07/07/17 02:54, Ludovic Court=C3=A8s wrote:
>>> Hi Ben,
>>>
>>> donttrustben@gmail.com (Ben Woodcroft) skribis:
>>>
>>>> commit 18dea67dc3a42d782b34b551304748346f173184
>>>> Author: Ben Woodcroft <donttrustben@gmail.com>
>>>> Date:   Mon Jul 3 23:00:14 2017 +1000
>>>>
>>>>       gnu: blast+: Update to 2.6.0.
>>>>       * gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
>>>>       [origin]: Remove bundled pcre.
>>>>       [arguments]: Replace paths in run_with_lock.c.  Configure with=
 pcre.
>>>>       [inputs]: Add pcre, perl, python.
>>> [...]
>>>
>>>> +              (patches (search-patches "blast+-fix-makefile.patch")=
)
>>> You forgot this patch in the commit.  Could you please commit it?
>>>
>>> We may have to revert it because it=E2=80=99s currently blocking eval=
uations on
>>> hydra.gnu.org: <https://hydra.gnu.org/jobset/gnu/master#tabs-errors>.
>> Gah, apologies. I will fix this in ~12 hours time. Anyone should feel =
free
>> to revert it in the meantime as I am unable to until then.
>> ben
> I reverted it in the meantime.
Thanks Leo. I've just pushed an updated commit=20
4732e6ee84fea4e58b8a62cad054b10966f4f6e6 with the patch.

ben