From: Ben Woodcroft <b.woodcroft@uq.edu.au>
To: Leo Famulari <leo@famulari.name>
Cc: guix-devel@gnu.org
Subject: Re: 01/02: gnu: blast+: Update to 2.6.0.
Date: Sat, 8 Jul 2017 14:14:23 +1000 [thread overview]
Message-ID: <46eea54e-5bc0-33d0-32e1-a2924aebeb7a@uq.edu.au> (raw)
In-Reply-To: <20170706233924.GA1280@jasmine.lan>
On 07/07/17 09:39, Leo Famulari wrote:
> On Fri, Jul 07, 2017 at 09:33:26AM +1000, Ben Woodcroft wrote:
>> Hi Ludo,
>>
>>
>> On 07/07/17 02:54, Ludovic Courtès wrote:
>>> Hi Ben,
>>>
>>> donttrustben@gmail.com (Ben Woodcroft) skribis:
>>>
>>>> commit 18dea67dc3a42d782b34b551304748346f173184
>>>> Author: Ben Woodcroft <donttrustben@gmail.com>
>>>> Date: Mon Jul 3 23:00:14 2017 +1000
>>>>
>>>> gnu: blast+: Update to 2.6.0.
>>>> * gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
>>>> [origin]: Remove bundled pcre.
>>>> [arguments]: Replace paths in run_with_lock.c. Configure with pcre.
>>>> [inputs]: Add pcre, perl, python.
>>> [...]
>>>
>>>> + (patches (search-patches "blast+-fix-makefile.patch"))
>>> You forgot this patch in the commit. Could you please commit it?
>>>
>>> We may have to revert it because it’s currently blocking evaluations on
>>> hydra.gnu.org: <https://hydra.gnu.org/jobset/gnu/master#tabs-errors>.
>> Gah, apologies. I will fix this in ~12 hours time. Anyone should feel free
>> to revert it in the meantime as I am unable to until then.
>> ben
> I reverted it in the meantime.
Thanks Leo. I've just pushed an updated commit
4732e6ee84fea4e58b8a62cad054b10966f4f6e6 with the patch.
ben
prev parent reply other threads:[~2017-07-08 4:14 UTC|newest]
Thread overview: 4+ messages / expand[flat|nested] mbox.gz Atom feed top
[not found] <20170704100851.17544.53007@vcs0.savannah.gnu.org>
[not found] ` <20170704100852.2E1DB20DF8@vcs0.savannah.gnu.org>
2017-07-06 16:54 ` 01/02: gnu: blast+: Update to 2.6.0 Ludovic Courtès
2017-07-06 23:33 ` Ben Woodcroft
2017-07-06 23:39 ` Leo Famulari
2017-07-08 4:14 ` Ben Woodcroft [this message]
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
List information: https://guix.gnu.org/
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to=46eea54e-5bc0-33d0-32e1-a2924aebeb7a@uq.edu.au \
--to=b.woodcroft@uq.edu.au \
--cc=guix-devel@gnu.org \
--cc=leo@famulari.name \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
Code repositories for project(s) associated with this public inbox
https://git.savannah.gnu.org/cgit/guix.git
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).