From mboxrd@z Thu Jan 1 00:00:00 1970 From: Leo Famulari Subject: Re: 01/02: gnu: blast+: Update to 2.6.0. Date: Thu, 6 Jul 2017 19:39:24 -0400 Message-ID: <20170706233924.GA1280@jasmine.lan> References: <20170704100851.17544.53007@vcs0.savannah.gnu.org> <20170704100852.2E1DB20DF8@vcs0.savannah.gnu.org> <87y3s18q18.fsf@inria.fr> <55f82836-7b5c-3c87-73fa-adf852774c94@uq.edu.au> Mime-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha256; protocol="application/pgp-signature"; boundary="GvXjxJ+pjyke8COw" Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:59561) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1dTGMt-00088T-Eo for guix-devel@gnu.org; Thu, 06 Jul 2017 19:39:32 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1dTGMq-0001Qe-BP for guix-devel@gnu.org; Thu, 06 Jul 2017 19:39:31 -0400 Content-Disposition: inline In-Reply-To: <55f82836-7b5c-3c87-73fa-adf852774c94@uq.edu.au> List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: Ben Woodcroft Cc: guix-devel@gnu.org --GvXjxJ+pjyke8COw Content-Type: text/plain; charset=utf-8 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable On Fri, Jul 07, 2017 at 09:33:26AM +1000, Ben Woodcroft wrote: > Hi Ludo, >=20 >=20 > On 07/07/17 02:54, Ludovic Court=C3=A8s wrote: > > Hi Ben, > >=20 > > donttrustben@gmail.com (Ben Woodcroft) skribis: > >=20 > > > commit 18dea67dc3a42d782b34b551304748346f173184 > > > Author: Ben Woodcroft > > > Date: Mon Jul 3 23:00:14 2017 +1000 > > >=20 > > > gnu: blast+: Update to 2.6.0. > > > * gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0. > > > [origin]: Remove bundled pcre. > > > [arguments]: Replace paths in run_with_lock.c. Configure with p= cre. > > > [inputs]: Add pcre, perl, python. > > [...] > >=20 > > > + (patches (search-patches "blast+-fix-makefile.patch")) > > You forgot this patch in the commit. Could you please commit it? > >=20 > > We may have to revert it because it=E2=80=99s currently blocking evalua= tions on > > hydra.gnu.org: . > Gah, apologies. I will fix this in ~12 hours time. Anyone should feel free > to revert it in the meantime as I am unable to until then. > ben I reverted it in the meantime. --GvXjxJ+pjyke8COw Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iQIzBAABCAAdFiEEsFFZSPHn08G5gDigJkb6MLrKfwgFAlleyiwACgkQJkb6MLrK fwjqzBAA4yPhQtXljcpY5+dT+kttZABz7KER4xm7tApQ678irzGkRiNDl9kWnJmK hI+snxCPT0rgkDBN/18TU15kR6+h/Xt+mK/2mcD8IjH1C5ZgXOBXlocW/nUFDON3 0T+DorTcew+0X6llkNhI53ETmN3BaN7TEh4TgiSdYQBP3LAcBhdctyDzrED7hGtC KykDEyNRz2gd4aZ/GqzNfJq2rAWWqNongGfMAERMjdRNC/FH1RttvruOdvjwWaow CXowvgm5AKT8LNyZB//GG3tGFUmr35hoFx2xPubYVph9WBIsQyNTdxIDe7Lqu6Xj 4lfcGqMuvh+jXRPuYRd7tT41Hgtv9B4xa+LaUeEkv40yH5rE2F5alwS5Rzgl/ROp qCo1FKGvKcuzgMMPSftbKfyTn3p7LEKDSOcPPzaNjV6fRGKSKiH7tZDBD/T704a5 dPrHZ6VCGA7Xy4e2MpCiZukNZ9b2SSzrLLxo6eiSkKI1niZPyyUSYE0QyOXKl946 67OngY88n6Tv4FqPEwc4D10DjWHap7Kq768HERuQjnI4IoXH+b9gxOjDUqWnyVVf pw+iOKguIE85oDITGX+vrNHK8GFA5dVrTDjKj2tDhEdiImZDRQYSPIpItcjzxn3N DWYwaOFpxWbrwdQFTCumolAYqtbRlGsxHapSkPvkQ6YpX0J6kjs= =RDeR -----END PGP SIGNATURE----- --GvXjxJ+pjyke8COw--