From mboxrd@z Thu Jan 1 00:00:00 1970 From: contact.ng0@cryptolab.net Subject: [PATCH] gnu: Add reducelcs. Date: Thu, 19 Jan 2017 11:52:39 +0000 Message-ID: <20170119115239.6478-2-contact.ng0@cryptolab.net> References: <20170119115239.6478-1-contact.ng0@cryptolab.net> Mime-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:39618) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1cUBFx-00044g-SH for guix-devel@gnu.org; Thu, 19 Jan 2017 06:51:55 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1cUBFt-0000J3-Dz for guix-devel@gnu.org; Thu, 19 Jan 2017 06:51:53 -0500 Received: from aibo.runbox.com ([91.220.196.211]:46947) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32) (Exim 4.71) (envelope-from ) id 1cUBFt-0000IK-23 for guix-devel@gnu.org; Thu, 19 Jan 2017 06:51:49 -0500 Received: from [10.9.9.212] (helo=mailfront12.runbox.com) by bars.runbox.com with esmtp (Exim 4.71) (envelope-from ) id 1cUBFq-0006lu-5b for guix-devel@gnu.org; Thu, 19 Jan 2017 12:51:46 +0100 In-Reply-To: <20170119115239.6478-1-contact.ng0@cryptolab.net> List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: guix-devel@gnu.org Cc: ng0 From: ng0 * gnu/packages/lcs.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add lcs.scm. --- gnu/local.mk | 1 + gnu/packages/lcs.scm | 67 ++++++++++++++++++++++++++++++++++++++++++++++++++++ 2 files changed, 68 insertions(+) create mode 100644 gnu/packages/lcs.scm diff --git a/gnu/local.mk b/gnu/local.mk index 217d31712..0e915cb32 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -203,6 +203,7 @@ GNU_SYSTEM_MODULES = \ %D%/packages/key-mon.scm \ %D%/packages/kodi.scm \ %D%/packages/language.scm \ + %D%/packages/lcs.scm \ %D%/packages/ldc.scm \ %D%/packages/lego.scm \ %D%/packages/less.scm \ diff --git a/gnu/packages/lcs.scm b/gnu/packages/lcs.scm new file mode 100644 index 000000000..6b00098ae --- /dev/null +++ b/gnu/packages/lcs.scm @@ -0,0 +1,67 @@ +;;; GNU Guix --- Functional package management for GNU +;;; Copyright © 2017 ng0 +;;; +;;; This file is part of GNU Guix. +;;; +;;; GNU Guix is free software; you can redistribute it and/or modify it +;;; under the terms of the GNU General Public License as published by +;;; the Free Software Foundation; either version 3 of the License, or (at +;;; your option) any later version. +;;; +;;; GNU Guix is distributed in the hope that it will be useful, but +;;; WITHOUT ANY WARRANTY; without even the implied warranty of +;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +;;; GNU General Public License for more details. +;;; +;;; You should have received a copy of the GNU General Public License +;;; along with GNU Guix. If not, see . + +(define-module (gnu packages lcs) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix packages) + #:use-module (gnu packages) + #:use-module (gnu packages maths) + #:use-module (guix git-download) + #:use-module (guix build-system gnu)) + +(define-public reducelcs + ;; This is the last commit which is available upstream, no + ;; tarball release happened since 2010. + (let ((commit "474f88deb968061abe8cf11c959e02319b8ae5c0") + (revision "1")) + (package + (name "reducelcs") + (version (string-append "0.0.0-" revision "." (string-take commit 7))) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/gdv/Reduce-Expand-for-LCS") + (commit commit))) + (file-name (string-append name "-" version "-checkout")) + (sha256 + (base32 + "1rllzcfwc042c336mhq262a8ha90x6afq30kvk60r7i4761j4yjm")))) + (build-system gnu-build-system) + (inputs + `(("openlibm" ,openlibm))) + (arguments + `(#:tests? #f ; no tests + #:phases + (modify-phases %standard-phases + (delete 'configure) ; no configure script + (replace 'install ; no install phase either + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (bin (string-append out "/bin"))) + (install-file "Approximation" bin) + (install-file "CollectResults" bin) + (install-file "GenerateInstances" bin) + #t)))))) + (synopsis "Approximate Longest Commons Subsequence computation tool") + (description + "@code{reduceLCS} is an implementation of the Reduce-Expand +algorithm for LCS. It is a fast program to compute the approximate +Longest Commons Subsequence of a set of strings.") + (home-page "http://gianluca.dellavedova.org/software/") + (license license:gpl2)))) -- 2.11.0