unofficial mirror of guix-devel@gnu.org 
 help / color / mirror / code / Atom feed
From: Ricardo Wurmus <rekado@elephly.net>
To: guix-devel@gnu.org
Subject: [PATCH 05/18] gnu: Add r-r4rna.
Date: Thu, 24 Nov 2016 17:51:26 +0100	[thread overview]
Message-ID: <20161124165139.13740-6-rekado@elephly.net> (raw)
In-Reply-To: <20161124165139.13740-1-rekado@elephly.net>

* gnu/packages/bioinformatics.scm (r-r4rna): New variable.
---
 gnu/packages/bioinformatics.scm | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 773b590..254ee13 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7246,6 +7246,29 @@ two-dimensional genome scans.")
 libraries for systems that do not have these available via other means.")
     (license license:artistic2.0)))
 
+(define-public r-r4rna
+  (package
+    (name "r-r4rna")
+    (version "0.1.4")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "http://www.e-rna.org/r-chie/files/R4RNA_"
+                           version ".tar.gz"))
+       (sha256
+        (base32
+         "1p0i78wh76jfgmn9jphbwwaz6yy6pipzfg08xs54cxavxg2j81p5"))))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-optparse" ,r-optparse)
+       ("r-rcolorbrewer" ,r-rcolorbrewer)))
+    (home-page "http://www.e-rna.org/r-chie/index.cgi")
+    (synopsis "Analysis framework for RNA secondary structure")
+    (description
+     "The R4RNA package aims to be a general framework for the analysis of RNA
+secondary structure and comparative analysis in R.")
+    (license license:gpl3+)))
+
 (define-public r-rhtslib
   (package
     (name "r-rhtslib")
-- 
2.10.2

  parent reply	other threads:[~2016-11-24 16:52 UTC|newest]

Thread overview: 27+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2016-11-24 16:51 [PATCH 00/18] Add R packages Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 01/18] gnu: Add r-rematch Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 02/18] gnu: Add r-cellranger Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 03/18] gnu: Add r-googlesheets Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 04/18] gnu: Add r-spams Ricardo Wurmus
2016-11-25  4:12   ` Leo Famulari
2016-11-28 21:39     ` Ricardo Wurmus
2016-11-24 16:51 ` Ricardo Wurmus [this message]
2016-11-24 16:51 ` [PATCH 06/18] gnu: Add r-dynamictreecut Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 07/18] gnu: Add r-preprocesscore Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 08/18] gnu: Add r-fastcluster Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 09/18] gnu: Add r-wgcna Ricardo Wurmus
2016-11-25 10:38   ` Ben Woodcroft
2016-11-28 21:45     ` Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 10/18] gnu: Add r-sfsmisc Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 11/18] gnu: Add r-kernlab Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 12/18] gnu: Add r-gtools Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 13/18] gnu: Add r-chipkernels Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 14/18] gnu: Add r-seqgl Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 15/18] gnu: Add r-gdata Ricardo Wurmus
2016-11-25  4:17   ` Leo Famulari
2016-11-24 16:51 ` [PATCH 16/18] gnu: Add r-gplots Ricardo Wurmus
2016-11-25  4:16   ` Leo Famulari
2016-11-25 22:53     ` Ludovic Courtès
2016-11-28 21:47       ` Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 17/18] gnu: Add r-rocr Ricardo Wurmus
2016-11-24 16:51 ` [PATCH 18/18] gnu: Add r-gkmsvm Ricardo Wurmus

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

  List information: https://guix.gnu.org/

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=20161124165139.13740-6-rekado@elephly.net \
    --to=rekado@elephly.net \
    --cc=guix-devel@gnu.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/guix.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).