* [PATCH] gnu: Add r-glmnet.
@ 2016-06-30 1:44 Ben Woodcroft
2016-06-30 12:42 ` Ricardo Wurmus
0 siblings, 1 reply; 3+ messages in thread
From: Ben Woodcroft @ 2016-06-30 1:44 UTC (permalink / raw)
To: guix-devel
* gnu/packages/statistics.scm (r-glmnet): New variable.
---
gnu/packages/statistics.scm | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index f037392..732d874 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -2244,6 +2244,32 @@ singular and eigenvalue decompositions, as well as for principal component
analysis of large sparse or dense matrices.")
(license (list license:gpl2+ license:gpl3+))))
+(define-public r-glmnet
+ (package
+ (name "r-glmnet")
+ (version "2.0-5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "glmnet" version))
+ (sha256
+ (base32
+ "1cbpzmbv837fvq88rgn6mgzgr9f1wqp9fg8gh2kkmngvr1957a9c"))))
+ (build-system r-build-system)
+ (inputs
+ `(("gfortran" ,gfortran)))
+ (propagated-inputs
+ `(("r-foreach" ,r-foreach)))
+ (home-page "http://www.jstatsoft.org/v33/i01")
+ (synopsis "Lasso and Elastic-Net Regularized Generalized Linear Models")
+ (description
+ "The glmnet package provides efficient procedures for fitting the entire
+lasso or elastic-net regularization path for linear and Poisson regression, as
+well as logistic, multinomial, Cox, multiple-response Gaussian and grouped
+multinomial models. The algorithm uses cyclical coordinate descent in a
+path-wise fashion.")
+ (license license:gpl2+)))
+
(define-public r-pkgmaker
(package
(name "r-pkgmaker")
--
2.9.0
^ permalink raw reply related [flat|nested] 3+ messages in thread* Re: [PATCH] gnu: Add r-glmnet.
2016-06-30 1:44 [PATCH] gnu: Add r-glmnet Ben Woodcroft
@ 2016-06-30 12:42 ` Ricardo Wurmus
2016-06-30 23:08 ` Ben Woodcroft
0 siblings, 1 reply; 3+ messages in thread
From: Ricardo Wurmus @ 2016-06-30 12:42 UTC (permalink / raw)
To: Ben Woodcroft; +Cc: guix-devel
Ben Woodcroft <donttrustben@gmail.com> writes:
> * gnu/packages/statistics.scm (r-glmnet): New variable.
> ---
> gnu/packages/statistics.scm | 26 ++++++++++++++++++++++++++
> 1 file changed, 26 insertions(+)
>
> diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
> index f037392..732d874 100644
> --- a/gnu/packages/statistics.scm
> +++ b/gnu/packages/statistics.scm
> @@ -2244,6 +2244,32 @@ singular and eigenvalue decompositions, as well as for principal component
> analysis of large sparse or dense matrices.")
> (license (list license:gpl2+ license:gpl3+))))
>
> +(define-public r-glmnet
> + (package
> + (name "r-glmnet")
> + (version "2.0-5")
> + (source
> + (origin
> + (method url-fetch)
> + (uri (cran-uri "glmnet" version))
> + (sha256
> + (base32
> + "1cbpzmbv837fvq88rgn6mgzgr9f1wqp9fg8gh2kkmngvr1957a9c"))))
> + (build-system r-build-system)
> + (inputs
> + `(("gfortran" ,gfortran)))
> + (propagated-inputs
> + `(("r-foreach" ,r-foreach)))
> + (home-page "http://www.jstatsoft.org/v33/i01")
> + (synopsis "Lasso and Elastic-Net Regularized Generalized Linear Models")
Does this need to be all caps?
> + (description
> + "The glmnet package provides efficient procedures for fitting the entire
> +lasso or elastic-net regularization path for linear and Poisson regression, as
> +well as logistic, multinomial, Cox, multiple-response Gaussian and grouped
> +multinomial models. The algorithm uses cyclical coordinate descent in a
> +path-wise fashion.")
> + (license license:gpl2+)))
The rest looks good to me. Thanks!
~~ Ricardo
^ permalink raw reply [flat|nested] 3+ messages in thread* Re: [PATCH] gnu: Add r-glmnet.
2016-06-30 12:42 ` Ricardo Wurmus
@ 2016-06-30 23:08 ` Ben Woodcroft
0 siblings, 0 replies; 3+ messages in thread
From: Ben Woodcroft @ 2016-06-30 23:08 UTC (permalink / raw)
To: Ricardo Wurmus, Ben Woodcroft; +Cc: guix-devel
On 30/06/16 22:42, Ricardo Wurmus wrote:
> Ben Woodcroft <donttrustben@gmail.com> writes:
>
>> * gnu/packages/statistics.scm (r-glmnet): New variable.
>> ---
>> gnu/packages/statistics.scm | 26 ++++++++++++++++++++++++++
>> 1 file changed, 26 insertions(+)
>>
>> diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
>> index f037392..732d874 100644
>> --- a/gnu/packages/statistics.scm
>> +++ b/gnu/packages/statistics.scm
>> @@ -2244,6 +2244,32 @@ singular and eigenvalue decompositions, as well as for principal component
>> analysis of large sparse or dense matrices.")
>> (license (list license:gpl2+ license:gpl3+))))
>>
>> +(define-public r-glmnet
>> + (package
>> + (name "r-glmnet")
>> + (version "2.0-5")
>> + (source
>> + (origin
>> + (method url-fetch)
>> + (uri (cran-uri "glmnet" version))
>> + (sha256
>> + (base32
>> + "1cbpzmbv837fvq88rgn6mgzgr9f1wqp9fg8gh2kkmngvr1957a9c"))))
>> + (build-system r-build-system)
>> + (inputs
>> + `(("gfortran" ,gfortran)))
>> + (propagated-inputs
>> + `(("r-foreach" ,r-foreach)))
>> + (home-page "http://www.jstatsoft.org/v33/i01")
>> + (synopsis "Lasso and Elastic-Net Regularized Generalized Linear Models")
> Does this need to be all caps?
No they do not. I made all except the first lower case and pushed.
Thanks for the review.
ben
^ permalink raw reply [flat|nested] 3+ messages in thread
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2016-06-30 1:44 [PATCH] gnu: Add r-glmnet Ben Woodcroft
2016-06-30 12:42 ` Ricardo Wurmus
2016-06-30 23:08 ` Ben Woodcroft
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