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From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
To: guix-devel@gnu.org
Subject: [PATCH] gnu: Add multiqc.
Date: Tue, 28 Jun 2016 16:50:42 +0200	[thread overview]
Message-ID: <20160628145042.25341-1-ricardo.wurmus@mdc-berlin.de> (raw)

* gnu/packages/bioinformatics.scm (multiqc): New variable.
---
 gnu/packages/bioinformatics.scm | 30 ++++++++++++++++++++++++++++++
 1 file changed, 30 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 04ed769..45595d0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5321,3 +5321,33 @@ group or two ChIP groups run under different conditions.")
       (description "This program compares version strings.  It intends to be a
 replacement for strverscmp.")
       (license license:gpl3+))))
+
+(define-public multiqc
+  (package
+    (name "multiqc")
+    (version "0.6")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+             "https://pypi.python.org/packages/23/d9/95a5e62eea95f220007d7a6683d0da1ee1d9f99e6932bcff793b6601ef15/multiqc-"
+             version ".tar.gz"))
+       (sha256
+        (base32
+         "0avw11h63ldpxy5pizc3wl1wa01ha7q10wb240nggsjz3jaqvyiy"))))
+    (build-system python-build-system)
+    (propagated-inputs
+     `(("python-jinja2" ,python-jinja2)
+       ("python-simplejson" ,python-simplejson)
+       ("python-pyyaml" ,python-pyyaml)
+       ("python-click" ,python-click)
+       ("python-matplotlib" ,python-matplotlib)))
+    (native-inputs
+     `(("python-setuptools" ,python-setuptools)))
+    (home-page "http://multiqc.info")
+    (synopsis "Aggregate bioinformatics analysis reports")
+    (description
+     "MultiQC is a tool to aggregate bioinformatics results across many
+samples into a single report.  It contains modules for a large number of
+common bioinformatics tools.")
+    (license license:gpl3)))
-- 
2.8.4

             reply	other threads:[~2016-06-28 14:51 UTC|newest]

Thread overview: 7+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2016-06-28 14:50 Ricardo Wurmus [this message]
2016-06-28 14:56 ` [PATCH] gnu: Add multiqc Ricardo Wurmus
2016-06-28 23:05   ` Ben Woodcroft
2016-07-05 14:04     ` Ricardo Wurmus
2016-06-28 15:30 ` Thompson, David
2016-06-28 22:02 ` Ludovic Courtès
2016-07-05 14:07   ` Ricardo Wurmus

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