From mboxrd@z Thu Jan 1 00:00:00 1970 From: Efraim Flashner Subject: Re: [PATCH] Fix jellyfish on non-x86_64 Date: Sat, 27 Feb 2016 22:22:27 +0200 Message-ID: <20160227222227.4a84eb99@debian-netbook> References: <8760xadti8.fsf@mdc-berlin.de> Mime-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha512; boundary="Sig_/w25i6XeOUq.l=u7qyQNWx8W"; protocol="application/pgp-signature" Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:51133) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1aZlNu-0003pM-Be for guix-devel@gnu.org; Sat, 27 Feb 2016 15:22:39 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1aZlNr-0005Li-6V for guix-devel@gnu.org; Sat, 27 Feb 2016 15:22:38 -0500 Received: from flashner.co.il ([178.62.234.194]:59803) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1aZlNq-0005Lb-Vq for guix-devel@gnu.org; Sat, 27 Feb 2016 15:22:35 -0500 In-Reply-To: <8760xadti8.fsf@mdc-berlin.de> List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org To: Ricardo Wurmus Cc: guix-devel --Sig_/w25i6XeOUq.l=u7qyQNWx8W Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable On Sat, 27 Feb 2016 17:10:07 +0100 Ricardo Wurmus wrote: > * gnu/packages/bioinformatics.scm (jellyfish)[arguments]: Append > "--with-sse=3Dno" and "--with-int128=3Dno" to configure flags unless the > system is x86_64. > --- > gnu/packages/bioinformatics.scm | 6 +++++- > 1 file changed, 5 insertions(+), 1 deletion(-) >=20 > diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatic= s.scm > index 7b3838d..36bcfd4 100644 > --- a/gnu/packages/bioinformatics.scm > +++ b/gnu/packages/bioinformatics.scm > @@ -1984,7 +1984,11 @@ experiments and provide highly stable thresholds b= ased on reproducibility.") > (list (string-append "--enable-ruby-binding=3D" > (assoc-ref %outputs "ruby")) > (string-append "--enable-python-binding=3D" > - (assoc-ref %outputs "python"))) > + (assoc-ref %outputs "python")) > + ,@(let ((system (or (%current-target-system) (%current-syst= em)))) > + (if (string-prefix? "x86_64" system) > + '() > + '("--with-sse=3Dno" "--with-int128=3Dno")))) ^^ this looks like it's spaced off by 1 > #:phases > (modify-phases %standard-phases > (add-before 'check 'set-SHELL-variable --=20 Efraim Flashner =D7=90=D7=A4=D7=A8=D7=99=D7=9D = =D7=A4=D7=9C=D7=A9=D7=A0=D7=A8 GPG key =3D A28B F40C 3E55 1372 662D 14F7 41AA E7DC CA3D 8351 Confidentiality cannot be guaranteed on emails sent or received unencrypted --Sig_/w25i6XeOUq.l=u7qyQNWx8W Content-Type: application/pgp-signature Content-Description: OpenPGP digital signature -----BEGIN PGP SIGNATURE----- Version: GnuPG v2 iQIcBAEBCgAGBQJW0gWDAAoJEPTB05F+rO6TnAkP+wcstjAeAdMzKgNgCzbamsrv LnGIQmFmJ1YxPzr3GocAwpD1WVeFCcjlywP2S0BluHG7Cbshib3+US2tzk0hHfj3 iNkiCBResfUOw7uJPM2J/wKKLfGhFQjisiHaMZKv2RsnbwckEIwbaSVCMI1+DvWv eMBVSAkweQ2M0zX8GaxhIeqZhkNRVyJB1D9dKYKYwUlgSJB45hs8sp/GQQpx6g3O dCsOEhjzncLgX32ze86kq/C6zDMstcS1cloIOlbvFaFQG6D7ySXAnEHCG/BLJ9hp a7Ip60gNsvq+fNvVDxZxtig2/Qsw/RL2mZGLhV95/Ayuf5DOelec4Z/MBH+74hzP 6KrANWRWmCAGxrcrTL/ogeINZrnf1PIUIN68fhXu6EjGGuJg4qF0MbkmnfSUO22N yBz/B6OR096igHJrh/P09BtUDeYBJVpyk4uEggb4C0Icvqso0/wcjm0EUYZqBgCs ToPlfvZsk46JleEBHweQGv1GoY2l4VBM9dC74kvva6ElGQ8TBZ/ay4Lr0Qot83lT 94kvoA51ukmMenrF0toYxKWcMmKTQRfhSjf7pesMx47C93cpORXEq7u76tGUMtg4 S0B7WdY2BX6ewRGasgT2nsaGSvKkqxW8n1y6SQ1xjV/4FZgiX+h/bohMRn0hkos7 Ds8MQ2NC98yNLf2kizmf =9bAN -----END PGP SIGNATURE----- --Sig_/w25i6XeOUq.l=u7qyQNWx8W--