Re: [PATCH] gnu: Add genometools.

[Andreas Enge <andreas@enge.fr>]

Hello,

On Sun, Feb 14, 2016 at 03:56:21PM +0100, Justus Winter wrote:
> this is my first package, please be nice ;) 

we always are :-)

The package looks very nice, I only have a few minor comments.

On Sun, Feb 14, 2016 at 03:56:22PM +0100, Justus Winter wrote:
> * gnu-system.am (dist_patch_DATA): Add new patch.
> * gnu/packages/bioinformatics.scm (genometools): New package.

This should read "new variable".

> +                   #:phases (alist-delete 'configure %standard-phases)))

You copy-pasted from an old-fashioned package here; I would suggest to use
the more modern modify-phases syntax.

> +   (synopsis "Versatile open source genome analysis software")
> +   (description
> +    "The GenomeTools genome analysis system is a free collection of
> +bioinformatics tools (in the realm of genome informatics) combined
> +into a single binary named gt.  It is based on a C library named
> +'libgenometools' which consists of several modules.")

Ah, do not use the word "open source"! :-)  Actually, we drop all occurrences
of "open source" and "free", since it is understood in the context of Guix.
Maybe the description could be a bit more, hm, descriptive? Instead of
giving the names of the commands, rather speak more about the functionality?

Thanks for your contribution, and welcome aboard!

Andreas