* Massive graph
@ 2016-02-13 16:47 Pjotr Prins
2016-02-13 22:15 ` Ricardo Wurmus
0 siblings, 1 reply; 7+ messages in thread
From: Pjotr Prins @ 2016-02-13 16:47 UTC (permalink / raw)
To: guix-devel
I am packaging the software that makes up http://genenetwork.org/.
http://biobeat.org/gn2.svg
or
http://biobeat.org/gn2.eps
Amazing. And there is more to come.
Pj.
-
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: Massive graph
2016-02-13 16:47 Massive graph Pjotr Prins
@ 2016-02-13 22:15 ` Ricardo Wurmus
2016-02-13 22:30 ` Pjotr Prins
0 siblings, 1 reply; 7+ messages in thread
From: Ricardo Wurmus @ 2016-02-13 22:15 UTC (permalink / raw)
To: Pjotr Prins; +Cc: guix-devel
Pjotr Prins <pjotr.public12@thebird.nl> writes:
> I am packaging the software that makes up http://genenetwork.org/.
>
> http://biobeat.org/gn2.svg
Woah! Nice how this gets close to the complexity of gene networks,
e.g. this one: http://www.john.ranola.org/Files/RadNetFull.pdf
~~ Ricardo
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: Massive graph
2016-02-13 22:15 ` Ricardo Wurmus
@ 2016-02-13 22:30 ` Pjotr Prins
2016-02-13 22:45 ` Leo Famulari
0 siblings, 1 reply; 7+ messages in thread
From: Pjotr Prins @ 2016-02-13 22:30 UTC (permalink / raw)
To: Ricardo Wurmus; +Cc: guix-devel
On Sat, Feb 13, 2016 at 11:15:14PM +0100, Ricardo Wurmus wrote:
>
> Pjotr Prins <pjotr.public12@thebird.nl> writes:
>
> > I am packaging the software that makes up http://genenetwork.org/.
> >
> > http://biobeat.org/gn2.svg
>
> Woah! Nice how this gets close to the complexity of gene networks,
> e.g. this one: http://www.john.ranola.org/Files/RadNetFull.pdf
We could do a hair-ball of the full Guix repository at some point :)
Pj.
--
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: Massive graph
2016-02-13 22:30 ` Pjotr Prins
@ 2016-02-13 22:45 ` Leo Famulari
2016-02-13 23:13 ` Ben Woodcroft
0 siblings, 1 reply; 7+ messages in thread
From: Leo Famulari @ 2016-02-13 22:45 UTC (permalink / raw)
To: Pjotr Prins; +Cc: guix-devel
On Sat, Feb 13, 2016 at 11:30:11PM +0100, Pjotr Prins wrote:
> On Sat, Feb 13, 2016 at 11:15:14PM +0100, Ricardo Wurmus wrote:
> >
> > Pjotr Prins <pjotr.public12@thebird.nl> writes:
> >
> > > I am packaging the software that makes up http://genenetwork.org/.
> > >
> > > http://biobeat.org/gn2.svg
> >
> > Woah! Nice how this gets close to the complexity of gene networks,
> > e.g. this one: http://www.john.ranola.org/Files/RadNetFull.pdf
>
> We could do a hair-ball of the full Guix repository at some point :)
I've killed `dot` after several minutes of trying to render a really
large graph in PNG format. I wonder if it's up to the task!
>
> Pj.
> --
>
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: Massive graph
2016-02-13 22:45 ` Leo Famulari
@ 2016-02-13 23:13 ` Ben Woodcroft
2016-02-13 23:22 ` Leo Famulari
0 siblings, 1 reply; 7+ messages in thread
From: Ben Woodcroft @ 2016-02-13 23:13 UTC (permalink / raw)
To: Leo Famulari, Pjotr Prins; +Cc: guix-devel
On 14/02/16 08:45, Leo Famulari wrote:
> On Sat, Feb 13, 2016 at 11:30:11PM +0100, Pjotr Prins wrote:
>> On Sat, Feb 13, 2016 at 11:15:14PM +0100, Ricardo Wurmus wrote:
>>> Pjotr Prins <pjotr.public12@thebird.nl> writes:
>>>
>>>> I am packaging the software that makes up http://genenetwork.org/.
>>>>
>>>> http://biobeat.org/gn2.svg
>>> Woah! Nice how this gets close to the complexity of gene networks,
>>> e.g. this one: http://www.john.ranola.org/Files/RadNetFull.pdf
>> We could do a hair-ball of the full Guix repository at some point :)
> I've killed `dot` after several minutes of trying to render a really
> large graph in PNG format. I wonder if it's up to the task!
From memory of probably outdated versions, svg output is much more
efficient, maybe give that a go.
ben
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: Massive graph
2016-02-13 23:13 ` Ben Woodcroft
@ 2016-02-13 23:22 ` Leo Famulari
2016-02-21 21:50 ` Ludovic Courtès
0 siblings, 1 reply; 7+ messages in thread
From: Leo Famulari @ 2016-02-13 23:22 UTC (permalink / raw)
To: Ben Woodcroft; +Cc: guix-devel
On Sun, Feb 14, 2016 at 09:13:28AM +1000, Ben Woodcroft wrote:
>
>
> On 14/02/16 08:45, Leo Famulari wrote:
> >On Sat, Feb 13, 2016 at 11:30:11PM +0100, Pjotr Prins wrote:
> >>On Sat, Feb 13, 2016 at 11:15:14PM +0100, Ricardo Wurmus wrote:
> >>>Pjotr Prins <pjotr.public12@thebird.nl> writes:
> >>>
> >>>>I am packaging the software that makes up http://genenetwork.org/.
> >>>>
> >>>> http://biobeat.org/gn2.svg
> >>>Woah! Nice how this gets close to the complexity of gene networks,
> >>>e.g. this one: http://www.john.ranola.org/Files/RadNetFull.pdf
> >>We could do a hair-ball of the full Guix repository at some point :)
> >I've killed `dot` after several minutes of trying to render a really
> >large graph in PNG format. I wonder if it's up to the task!
> From memory of probably outdated versions, svg output is much more
> efficient, maybe give that a go.
I noticed it was a lot easier on my web browser! I will use it in the
future.
>
> ben
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: Massive graph
2016-02-13 23:22 ` Leo Famulari
@ 2016-02-21 21:50 ` Ludovic Courtès
0 siblings, 0 replies; 7+ messages in thread
From: Ludovic Courtès @ 2016-02-21 21:50 UTC (permalink / raw)
To: Leo Famulari; +Cc: guix-devel
For those big graphs I think we need renderers and interactive viewers
like Tulip or something based on d3.js.
Ludo’.
^ permalink raw reply [flat|nested] 7+ messages in thread
end of thread, other threads:[~2016-02-21 21:51 UTC | newest]
Thread overview: 7+ messages (download: mbox.gz follow: Atom feed
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2016-02-13 16:47 Massive graph Pjotr Prins
2016-02-13 22:15 ` Ricardo Wurmus
2016-02-13 22:30 ` Pjotr Prins
2016-02-13 22:45 ` Leo Famulari
2016-02-13 23:13 ` Ben Woodcroft
2016-02-13 23:22 ` Leo Famulari
2016-02-21 21:50 ` Ludovic Courtès
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