From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp12.migadu.com ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms5.migadu.com with LMTPS id 6I9jOEHNImN5JQAAbAwnHQ (envelope-from ) for ; Thu, 15 Sep 2022 08:59:13 +0200 Received: from aspmx1.migadu.com ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp12.migadu.com with LMTPS id uIe5OEHNImN2BgEAauVa8A (envelope-from ) for ; Thu, 15 Sep 2022 08:59:13 +0200 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 460031EEDC for ; Thu, 15 Sep 2022 08:59:13 +0200 (CEST) Received: from localhost ([::1]:55596 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1oYiq8-0006vM-C9 for larch@yhetil.org; Thu, 15 Sep 2022 02:59:12 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:54084) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1oY3B5-0008TK-UV for bug-guix@gnu.org; Tue, 13 Sep 2022 06:30:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:60257) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1oY3B5-00062k-FK for bug-guix@gnu.org; Tue, 13 Sep 2022 06:30:03 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1oY3B5-0007Hw-16 for bug-guix@gnu.org; Tue, 13 Sep 2022 06:30:03 -0400 X-Loop: help-debbugs@gnu.org Subject: bug#57764: Corrupted store on top on Debian, you want the output Resent-From: Maze Original-Sender: "Debbugs-submit" Resent-CC: bug-guix@gnu.org Resent-Date: Tue, 13 Sep 2022 10:30:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 57764 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 57764@debbugs.gnu.org X-Debbugs-Original-To: bug-guix@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.166306494227916 (code B ref -1); Tue, 13 Sep 2022 10:30:02 +0000 Received: (at submit) by debbugs.gnu.org; 13 Sep 2022 10:29:02 +0000 Received: from localhost ([127.0.0.1]:48956 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oY3A5-0007G3-SU for submit@debbugs.gnu.org; Tue, 13 Sep 2022 06:29:02 -0400 Received: from lists.gnu.org ([209.51.188.17]:48464) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oY39z-0007Fi-Sh for submit@debbugs.gnu.org; Tue, 13 Sep 2022 06:28:59 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:37636) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1oY39z-00077f-MO for bug-guix@gnu.org; Tue, 13 Sep 2022 06:28:55 -0400 Received: from mx1.polytechnique.org ([129.104.30.34]:55456) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1oY39x-0005mO-1r for bug-guix@gnu.org; Tue, 13 Sep 2022 06:28:55 -0400 Received: from ubik (unknown [199.167.29.65]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by ssl.polytechnique.org (Postfix) with ESMTPSA id 6A78D565CAC for ; Tue, 13 Sep 2022 12:28:49 +0200 (CEST) Received: from maze by ubik with local (Exim 4.96) (envelope-from ) id 1oY39m-0003IN-1L for bug-guix@gnu.org; Tue, 13 Sep 2022 18:28:42 +0800 From: Maze Date: Tue, 13 Sep 2022 18:28:42 +0800 Message-ID: User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/28.1 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain X-AV-Checked: ClamAV using ClamSMTP at svoboda.polytechnique.org (Tue Sep 13 12:28:50 2022 +0200 (CEST)) Received-SPF: pass client-ip=129.104.30.34; envelope-from=SRS0=t+sZ=ZQ=pkbd.org=maze@bounces.m4x.org; helo=mx1.polytechnique.org X-Spam_score_int: -39 X-Spam_score: -4.0 X-Spam_bar: ---- X-Spam_report: (-4.0 / 5.0 requ) BAYES_00=-1.9, HEADER_FROM_DIFFERENT_DOMAINS=0.25, RCVD_IN_DNSWL_MED=-2.3, RCVD_IN_MSPIKE_H3=0.001, RCVD_IN_MSPIKE_WL=0.001, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Mailman-Approved-At: Thu, 15 Sep 2022 02:56:44 -0400 X-BeenThere: bug-guix@gnu.org List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: bug-guix-bounces+larch=yhetil.org@gnu.org Sender: "bug-Guix" X-Migadu-Flow: FLOW_IN X-Migadu-To: larch@yhetil.org X-Migadu-Country: US ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1663225153; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:mime-version:mime-version: content-type:content-type:resent-cc:resent-from:resent-sender: resent-message-id:list-id:list-help:list-unsubscribe:list-subscribe: list-post; bh=9QannCjjONRn9+zPh/kp6bm+EAHd+p5phjyH43MhEfg=; b=Fp7+UCpLJ27aPK0KmkngrHJ9V4YC7Eu/ZPM7r8BPnyHifN68K4a8vyx6+y8qMiLIitQc1O iK62I40uko2X3cuJkCI/uizPVjee56aeVEDrzj3wH7B/8F8r6FWU8ilm5P0AFIrL5O1sY+ nyVL+DyaH7nmdYZOXNZKvqdxULGyzTSNsy4nVUEGbv/esv0CrFr6dHXWAD6DvJYdA4xRl7 pIAKv0I4kPO1CQEKu6Mm57ULf/I6xC+dWnI1TNm7o1nP/bkaDYnepHc4VAMOlyU1JOJ6A4 t4QFxMXS1KOfAxgrLzJtoHmO075hUz9xdIexAyg0O0FyvJ/kKSSM+8ZYZeRkdg== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1663225153; a=rsa-sha256; cv=none; b=AX4MdqB7ytBMFy8QR+b4ORjYv4TZwOOSYse5Pow2KgeyDTyaAnxS3LPtAqKBgsMDuIB5At ehGP3vvEokzk+J+lPV0KZARAFxFpShnGjFLmym7g+fE9w+C2LqgdklELcUzTaWWRf1IwIu uu/57Ye760qYXQd3XH/bRRyD3GghuWCk21npLIFGLsB9Ap+wu+UhUoaswjQHSbKaMfC2JJ dP0gKrYs8vV5R1S1QAtDPX8aNlQI/DXJrJ7CnyGPlTM2cBEHNdF+E8+8SVnW06P9yfesl7 vgVqRFO6fYHlV2Ib/c+nesDZWfYto8VVf0w98OfuUo3uLs8DKRX/xLRmpkQN4w== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=none; dmarc=none; spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: -2.23 Authentication-Results: aspmx1.migadu.com; dkim=none; dmarc=none; spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: 460031EEDC X-Spam-Score: -2.23 X-Migadu-Scanner: scn1.migadu.com X-TUID: xn7cHyYpx4Dj I corrupted my store and it says you want the guix pull output, so please find it at the end of this message. Mostly I send it because guix asks, but (see below) at least 2 things broke on that machine, not sure it's related. I have to explain a little but I don't actually require or expect that a lot of indivudually-tailored help can be given by GNU in this case... It's a non-standard use case on more than one account. I have been doing more than a few unsupported things with this installation. Over the week-end and Monday, 3 things stand out: * I have been starting to use guix home on this guix which is not a guix system but which is on top of Debian. I have some user shepherd services. They still work as I'm writing this. I think this is unsupported though. * I tried to install a guix system to a thumb drive. It is inconvenient to use the ISO so I decided to do it from Guix on top of Debian. When I do this I can't start the cow-store service because it's only available from the ISO installer. Instead I can use the procedure mount-cow-store from guile REPL as root, and it goes through. I have done this in the past probably succesfully in virtual machines running guix system, although I could not say for sure if the store of the installing virtual machine survived it. This time however, it failed silently to install GRUB stage 1 correctly on the thumb drive. Then, I realized my store was broken on the installing machine on the next morning. * Guix was not in my paths because the latest guix profiles were not in the store anymore. As a last ditch effort I used rm to remove some links to non-existing store locations and ln to restore a chain of symbolic links to some recent Guix that were still in the store. I did this under /var/guix only. Because rm does what rm does, I can suppose I did not remove store files on top of what was already missing. guix-daemon did start, but then guix pull failed with the backtrace below The second point is kind of messy because I know for a fact that the grub-install from Debian was broken either by GRUB upstream, by Debian or by me, but not by guix. This in turn may or may not be weirdly related to how I may have corrupted the guix store of that machine when installing to the thumb drive... I also have a private channel but I don't think it's the cause. I have changed some path information, the private channel is accessed from a local machine filesystem path. Updating channel 'priv' from Git repository at '/home/aaa/bbb/ccc/ddd'... Authenticating channel 'priv', commits 8ded6c0 to 3e62002 (1 new commits)... Updating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'... Authenticating channel 'guix', commits 9edb3f6 to 05c5807 (84 new commits)... Building from these channels: guix https://git.savannah.gnu.org/git/guix.git 05c5807 priv /home/maze/src/chan/priv 3e62002 substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0% compute-guix-derivation 1011B 94KiB/s 00:00 [##################] 100.0% Computing Guix derivation for 'x86_64-linux'... -Backtrace: In ./guix/store.scm: 1377:11 19|(loop (# name: "guix-packages-base-modules" gexp: # ?) ?) 1290:4 18 (call-with-build-handler # ?) 2165:24 17 (run-with-store # # ?) In ./guix/gexp.scm: 898:13 16 (_ #) In ./guix/store.scm: 1993:8 15 (_ #) In ./guix/gexp.scm: 300:22 14 (_ #) 1181:2 13 (_ #) 1047:2 12 (_ #) 893:4 11 (_ #) In ./guix/store.scm: 2050:12 10 (_ #) 1372:6 9 (map/accumulate-builds # # ?) 1377:11 8\(loop (# name: "guix-packages-base" gexp: # ?) ?) 1290:4 7 (call-with-build-handler # ?) 2165:24 6 (run-with-store # # ?) In ./guix/gexp.scm: 898:13 5 (_ #) In ./guix/store.scm: 1993:8 4 (_ #) In ./guix/gexp.scm: 300:22 3 (_ #) In ./guix/store.scm: 2037:38 2 (_ #) In ./guix/derivations.scm: 963:17 1 (derivation # "guix-packages-base" "/gnu/store/1jgcbdzx2ss6xv59w?" ?) In ./guix/store.scm: 1033:9 0 (_ # "guix-packages-base.drv" #vu8(68 101 114 105 118 101 40 91 ?) ?) ./guix/store.scm:1033:9: ERROR: 1. &store-protocol-error: message: "opening file `/gnu/store/406g41s0dgfmsczphv95p56hbs84a3rf-guix-extra.drv': No such file or directory" status: 1 guix pull: error: You found a bug: the program '/gnu/store/9xprnlxcag6z3ib6gmw8rs4k04iw808p-compute-guix-derivation' failed to compute the derivation for Guix (version: "05c5807ea5ce1f8af8068151906d670edda97afe"; system: "x86_64-linux"; host version: "072cc8d1415a2abf66b36249c61658a828dead88"; pull-version: 1). Please report the COMPLETE output above by email to .