* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
@ 2021-04-12 5:39 bo0od
2021-04-12 18:04 ` bug#47717: guix becomes unresponsive while building the 'vigra' package Leo Famulari
2021-04-12 18:41 ` bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure Tobias Geerinckx-Rice via Bug reports for GNU Guix
0 siblings, 2 replies; 17+ messages in thread
From: bo0od @ 2021-04-12 5:39 UTC (permalink / raw)
To: 47717
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Hi There,
I have used "guix pull" then "guix upgrade" one of the packages couldnt
be built but thats not the real issue, The real issue it caused guix to
freeze for like not less than 2+ hours and i couldnt do anything with
the distro until guix cut out the build/upgradation by itself.
check the uploaded content.
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[-- Attachment #3: guixfreeze.txt --]
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user@host ~$ guix pull
Updating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'...
Authenticating channel 'guix', commits 9edb3f6 to f589878 (29 new commits)...
Building from this channel:
guix https://git.savannah.gnu.org/git/guix.git f589878
substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%
substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%
substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%
building /gnu/store/2h67qhmnh3hf0pynzk5jggcrbh8fk11j-module-import.drv...
module-import-compiled 1.5MiB 832KiB/s 00:02 [##################] 100.0%
building /gnu/store/7jkg24cn9r895j1l0h0mn88bflyrjgrr-compute-guix-derivation.drv...
Computing Guix derivation for 'x86_64-linux'... |
substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%
The following derivations will be built:
/gnu/store/7brkz5dgsckl62gfnfahicha84npjvya-profile.drv
/gnu/store/6frarcmgbbz7nq7d3w2gldcvrac7zyiy-guix-f5898781e.drv
/gnu/store/mfibnjbl9i5jah38ra25qcgyxw5yf2fc-guix-f5898781e-modules.drv
/gnu/store/f6idlbw2cf92kmy40wb75vcygaf8gf87-guix-cli-modules.drv
/gnu/store/fc1gb6r3qgxfbkkwgdjcf93jldsp8lav-guix-config-modules.drv
/gnu/store/gvs4w2659h0x1qbhlj3qffw0wslrbqxw-guix-config-source.drv
/gnu/store/3ds96rwh9cjpijnbgrfxh8b67aqyy7rz-config.scm.drv
/gnu/store/zczr92kiaqp1h77621m138ppb9qrmp6f-guix-config.drv
/gnu/store/gyw7jv5b5hapkiwcighq6izmply8958b-guix-system-modules.drv
/gnu/store/nvjmmwi7kws7rk8b2gh646wffy7b1dqp-guix-packages-modules.drv
/gnu/store/q5rp30f2bpklkklakifwz0dkicc2jym1-guix-packages-base-modules.drv
/gnu/store/wvfr6hw0dn6l5ify5ssnsvliyl5dyqmx-guix-system-tests-modules.drv
/gnu/store/vcsbgk83ajgmrlraw56xf33m03zsmdml-guix-daemon.drv
/gnu/store/w2rcmp9m66r8cvphn7j2davrrn3w59m0-guix-command.drv
/gnu/store/mifn7xx708blya5cf21a69m6kc00q5gd-guix-module-union.drv
/gnu/store/1wisfkbd837kn5sign1j258cbkamxwv7-inferior-script.scm.drv
/gnu/store/c5ghl8m8m6p4507j6d68vc9ggv59lwzd-profile.drv
20.2 MB will be downloaded
guix-cli 1.1MiB/s 00:01 | 1017KiB transferred
guix-packages 1.9MiB/s 00:02 | 3.9MiB transferred
guix-packages-base 9.6MiB 1.8MiB/s 00:05 [##################] 100.0%
guix-system 1.6MiB/s 00:04 | 7.1MiB transferred
guix-system-tests 300KiB 655KiB/s 00:00 [##################] 100.0%
building /gnu/store/3ds96rwh9cjpijnbgrfxh8b67aqyy7rz-config.scm.drv...
building /gnu/store/f6idlbw2cf92kmy40wb75vcygaf8gf87-guix-cli-modules.drv...
building /gnu/store/gvs4w2659h0x1qbhlj3qffw0wslrbqxw-guix-config-source.drv...
building /gnu/store/q5rp30f2bpklkklakifwz0dkicc2jym1-guix-packages-base-modules.drv...
building /gnu/store/zczr92kiaqp1h77621m138ppb9qrmp6f-guix-config.drv...
building /gnu/store/nvjmmwi7kws7rk8b2gh646wffy7b1dqp-guix-packages-modules.drv...
building /gnu/store/fc1gb6r3qgxfbkkwgdjcf93jldsp8lav-guix-config-modules.drv...
building /gnu/store/gyw7jv5b5hapkiwcighq6izmply8958b-guix-system-modules.drv...
building /gnu/store/wvfr6hw0dn6l5ify5ssnsvliyl5dyqmx-guix-system-tests-modules.drv...
building /gnu/store/mfibnjbl9i5jah38ra25qcgyxw5yf2fc-guix-f5898781e-modules.drv...
building /gnu/store/mifn7xx708blya5cf21a69m6kc00q5gd-guix-module-union.drv...
building /gnu/store/w2rcmp9m66r8cvphn7j2davrrn3w59m0-guix-command.drv...
building /gnu/store/vcsbgk83ajgmrlraw56xf33m03zsmdml-guix-daemon.drv...
building /gnu/store/6frarcmgbbz7nq7d3w2gldcvrac7zyiy-guix-f5898781e.drv...
building CA certificate bundle...
building fonts directory...
building directory of Info manuals...
building database for manual pages...
building profile with 1 package...
building /gnu/store/1wisfkbd837kn5sign1j258cbkamxwv7-inferior-script.scm.drv...
building package cache...
building profile with 1 package...
New in this revision:
12 new packages: abook, cl-clip, ecl-clip,
emacs-elfeed-protocol, emacs-ghq, emacs-mode-line-idle, emacs-vertico,
lagrange, python-plumbum, python-pysctp, python-pytest-httpserver,
sbcl-clip
43 packages upgraded: acpica@20210331, edgar@1.34,
emacs-ivy-posframe@0.6.0, emacs-posframe@1.0.0, emacs-repl-toggle@0.7.1,
ghq@1.1.7, gpodder@3.10.18, irssi@1.2.3, libime@1.0.6, librsync@2.3.2,
minetest@5.4.1, python-cython@0.29.22, …
hint: Run `guix pull --news' to read all the news.
user@host ~$ guix upgrade
The following packages will be upgraded:
libreoffice (dependencies or package changed)
onionshare (dependencies or package changed)
substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%
The following derivations will be built:
/gnu/store/bjr3zkp0p7na59xc5y613aqc9kxndcaf-libreoffice-6.4.7.2.drv
/gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv
/gnu/store/kwp6yfi9k0djcmiq1izwcsjvkl5q117j-onionshare-2.3.1.drv
/gnu/store/8r7vdcypg0av5yd1rg6xabwyzbn40jg2-python-bidict-0.21.2.drv
/gnu/store/aipi6pnpv89fwfcn5y5hj7gr5rvdvsdg-python-identify-1.4.25.drv
/gnu/store/mvy035wjmkfl7vvc41r1ncgjmq5fi7zw-python-editdistance-0.3.1-1.3ea84a7.drv
/gnu/store/bh6dym4n0sdj09bsjbyyrmc92wks6jg8-python-pre-commit-2.10.0.drv
/gnu/store/xy86vq54m0l3d4kkzlcg93k1917b6f97-python-sphinx-autodoc-typehints-1.11.1.drv
/gnu/store/j772pksrz8wj4qwbg80k203vzhcfsai8-python-sphobjinv-2.0.1.drv
/gnu/store/is4i8jdmnm68c9cxkafxq9h0r323kdaw-python-flask-socketio-5.0.1.drv
/gnu/store/zsr7npa3i5yf0b8bfa0b6w1khjc9v018-python-socketio-5.1.0.drv
/gnu/store/yi2rl7ijkzp2fq40n863pmdxa8j31xig-onionshare-cli-2.3.1.drv
101 items will be downloaded
substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%
glm-0.9.9.8 141KiB 422KiB/s 00:00 [##################] 100.0%
Flask-SocketIO-5.0.1.tar.gz 16KiB 4.8MiB/s 00:00 [# ] 6.4 Flask-SocketIO-5.0.1.tar.gz 16KiB 4.1MiB/s 00:00 [##################] 100.0%
bidict-0.21.2.tar.gz 373KiB 523KiB/s 00:01 [##################] 100.0%
cppunit-1.15.1 197KiB 505KiB/s 00:00 [##################] 100.0%
diffutils-3.7 336KiB 825KiB/s 00:00 [##################] 100.0%
doxygen-1.8.17 3.6MiB 765KiB/s 00:05 [##################] 100.0%
ed-1.16 56KiB 3.8MiB/s 00:00 [##################] 100.0%
findutils-4.7.0 497KiB 910KiB/s 00:01 [##################] 100.0%
gfortran-7.5.0-lib 5.3MiB 837KiB/s 00:06 [##################] 100.0%
glew-2.1.0 331KiB 819KiB/s 00:00 [##################] 100.0%
gperf-3.1 97KiB 750KiB/s 00:00 [##################] 100.0%
hdf5-1.10.7 2.7MiB 837KiB/s 00:03 [##################] 100.0%
ilmbase-2.5.5 214KiB 712KiB/s 00:00 [##################] 100.0%
jsoncpp-1.9.2 85KiB 3.5MiB/s 00:00 [##################] 100.0%
lapack-3.9.0 2.6MiB 752KiB/s 00:04 [##################] 100.0%
libreoffice-6.4.7.2.tar.xz 221.6MiB 4.0MiB/s 00:00 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 770KiB/s 00:00 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 770KiB/s 00:00 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 770KiB/s 00:01 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 829KiB/s 00:01 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 817KiB/s 00:01 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 810KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 805KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 809KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 825KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 820KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 361KiB/s 00:06 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 376KiB/s 00:07 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 391KiB/s 00:07 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 413KiB/s 00:07 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 433KiB/s 00:07 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 453KiB/s 00:08 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 471KiB/s 00:08 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 488KiB/s 00:08 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 512KiB/s 00:08 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 534KiB/s 00:09 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 555KiB/s 00:09 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 582KiB/s 00:09 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 601KiB/s 00:09 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 631KiB/s 00:10 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 661KiB/s 00:10 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 689KiB/s 00:10 [ ] 3 libreoffice-6.4.7.2.tar.xz 221.6MiB 716KiB/s 00:10 [ ] 3 libreoffice-6.4.7.2.tar.xz 221.6MiB 749KiB/s 00:11 [ ] 3 libreoffice-6.4.7.2.tar.xz 221.6MiB 783KiB/s 00:11 [ ] 3 libreoffice-6.4.7.2.tar.xz 221.6MiB 822KiB/s 00:11 [ ] 4 libreoffice-6.4.7.2.tar.xz 221.6MiB 861KiB/s 00:11 [ ] 4 libreoffice-6.4.7.2.tar.xz 221.6MiB 902KiB/s 00:12 [ ] 4 libreoffice-6.4.7.2.tar.xz 221.6MiB 943KiB/s 00:12 [ ] 4 libreoffice-6.4.7.2.tar.xz 221.6MiB 989KiB/s 00:12 [ ] 5 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.0MiB/s 00:12 [# ] 5 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.1MiB/s 00:13 [# ] 6 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.1MiB/s 00:13 [# ] 6 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.2MiB/s 00:13 [# ] 6 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.2MiB/s 00:13 [# ] 7 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.3MiB/s 00:13 [# ] 7 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.3MiB/s 00:14 [# ] 8 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.3MiB/s 00:14 [# ] 8 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.3MiB/s 00:14 [# ] 8 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:15 [# ] 9 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:15 [# ] 9 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:15 [# ] 9 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:15 [# ] 9 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:16 [# ] 10 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:16 [# ] 10 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:16 [# ] 10 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:16 [## ] 11 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:17 [## ] 11 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:17 [## ] 11 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:17 [## ] 12 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:17 [## ] 12 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:18 [## ] 12 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:18 [## ] 13 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:18 [## ] 13 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:18 [## ] 13 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:19 [## ] 14 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:19 [## ] 14 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:19 [## ] 14 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:19 [## ] 15 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:20 [## ] 15 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:20 [## ] 15 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:20 [## ] 16 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:20 [## ] 16 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:21 [### ] 16 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:21 [### ] 17 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:21 [### ] 17 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:21 [### ] 17 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:22 [### ] 18 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:22 [### ] 18 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:22 [### ] 18 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:22 [### ] 19 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:23 [### ] 19 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:23 [### ] 19 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:23 [### ] 20 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:23 [### ] 20 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:24 [### ] 20 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:24 [### ] 21 libreoffice-6.4.7.2.tar.xz 221.6MiB 2.0MiB/s 00:24 [### ] 21 libreoffice-6.4.7.2.tar.xz 221.6MiB 2.0MiB/s 00:24 [### ] 21 libreoffice-6.4.7.2.tar.xz 221.6MiB 2.0MiB/s 00:24 [### ] 21 libreoffice-6.4.7.2.tar.xz 221.6MiB 2.0MiB/s 00:25 [#### ] 22 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:30 [#### ] 22 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:30 [#### ] 22 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:31 [#### ] 22 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:31 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:31 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:31 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:32 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:32 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:32 [#### ] 24 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:32 [#### ] 24 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:33 [#### ] 24 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:33 [#### ] 24 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:33 [#### ] 25 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:33 [#### ] 25 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:34 [#### ] 25 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building /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv...
42% [############################# ]builder for `/gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv' failed with exit code 1
build of /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv failed
View build log at '/var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2'.
cannot build derivation `/gnu/store/bjr3zkp0p7na59xc5y613aqc9kxndcaf-libreoffice-6.4.7.2.drv': 1 dependencies couldn't be built
guix upgrade: error: build of `/gnu/store/bjr3zkp0p7na59xc5y613aqc9kxndcaf-libreoffice-6.4.7.2.drv' failed
user@host ~$
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix becomes unresponsive while building the 'vigra' package
2021-04-12 5:39 bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure bo0od
@ 2021-04-12 18:04 ` Leo Famulari
2021-04-13 11:03 ` bo0od
2021-04-12 18:41 ` bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure Tobias Geerinckx-Rice via Bug reports for GNU Guix
1 sibling, 1 reply; 17+ messages in thread
From: Leo Famulari @ 2021-04-12 18:04 UTC (permalink / raw)
To: bo0od; +Cc: 47717
On Mon, Apr 12, 2021 at 05:39:11AM +0000, bo0od wrote:
> I have used "guix pull" then "guix upgrade" one of the packages couldnt be
> built but thats not the real issue, The real issue it caused guix to freeze
> for like not less than 2+ hours and i couldnt do anything with the distro
> until guix cut out the build/upgradation by itself.
>
> check the uploaded content.
[...]
> building /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv...
> 42% [############################# ]builder for `/gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv' failed with exit code 1
> build of /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv failed
> View build log at '/var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2'.
So, it failed to build 'vigra'. This package is notoriously expensive to
build, although it's not expected that your computer would stop
responding.
What kind of computer are you using? Are you using swap?
Ideally, we'd have a substitute for this...
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-12 5:39 bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure bo0od
2021-04-12 18:04 ` bug#47717: guix becomes unresponsive while building the 'vigra' package Leo Famulari
@ 2021-04-12 18:41 ` Tobias Geerinckx-Rice via Bug reports for GNU Guix
2021-04-12 22:59 ` raingloom
2021-04-13 11:34 ` bo0od
1 sibling, 2 replies; 17+ messages in thread
From: Tobias Geerinckx-Rice via Bug reports for GNU Guix @ 2021-04-12 18:41 UTC (permalink / raw)
To: bo0od; +Cc: 47717
[-- Attachment #1: Type: text/plain, Size: 1339 bytes --]
Hi bo0od,
Your subject was quite dramatic and probably not true. Try to
avoid both.
bo0od writes:
> The real issue it caused guix to freeze for like not less than
> 2+
> hours and i couldnt do anything with the distro until guix cut
> out
> the build/upgradation by itself.
Take a look at (and next time, attach)
$ bzless
/var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2
the log file mentioned in the error message. You'll probably find
the string ‘Killed’ near the end. If you haven't rebooted yet,
$ grep oom /proc/vmstat
will probably return something non-zero.
If so: you ran out of memory while building a heavy package. This
causes your system to become unresponsive whilst it tries to
postpone that for as long as possible. This is a fact of Linux.
You can try to work around it by adding RAM, passing ‘-{M,c}1’ to
the guix command that failed, and/or enabling swap, but the root
cause is you simply don't have enough memory to build this package
at its default settings.
Or, you can make sure you download a substitute instead of trying
to build everything locally. At the time of writing (commit
d14f213) there's a libreoffice substitute on ci.guix.gnu.org. Are
substitutes configured and enabled?
Kind regards,
T G-R
[-- Attachment #2: signature.asc --]
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^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-12 18:41 ` bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure Tobias Geerinckx-Rice via Bug reports for GNU Guix
@ 2021-04-12 22:59 ` raingloom
2021-04-13 11:34 ` bo0od
1 sibling, 0 replies; 17+ messages in thread
From: raingloom @ 2021-04-12 22:59 UTC (permalink / raw)
To: 47717; +Cc: bo0od
On Mon, 12 Apr 2021 20:41:00 +0200
Tobias Geerinckx-Rice via Bug reports for GNU Guix <bug-guix@gnu.org>
wrote:
> Hi bo0od,
>
> Your subject was quite dramatic and probably not true. Try to
> avoid both.
>
> bo0od writes:
> > The real issue it caused guix to freeze for like not less than
> > 2+
> > hours and i couldnt do anything with the distro until guix cut
> > out
> > the build/upgradation by itself.
>
> Take a look at (and next time, attach)
>
> $ bzless
> /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2
>
> the log file mentioned in the error message. You'll probably find
> the string ‘Killed’ near the end. If you haven't rebooted yet,
>
> $ grep oom /proc/vmstat
>
> will probably return something non-zero.
>
> If so: you ran out of memory while building a heavy package. This
> causes your system to become unresponsive whilst it tries to
> postpone that for as long as possible. This is a fact of Linux.
>
> You can try to work around it by adding RAM, passing ‘-{M,c}1’ to
> the guix command that failed, and/or enabling swap, but the root
> cause is you simply don't have enough memory to build this package
> at its default settings.
>
> Or, you can make sure you download a substitute instead of trying
> to build everything locally. At the time of writing (commit
> d14f213) there's a libreoffice substitute on ci.guix.gnu.org. Are
> substitutes configured and enabled?
>
> Kind regards,
>
> T G-R
Also this is an issue in general with the Linux OOM killer. I recommend
installing earlyoom. It's already packaged in Guix and there is even a
service description for it.
It will help with the freezing issue.
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix becomes unresponsive while building the 'vigra' package
2021-04-12 18:04 ` bug#47717: guix becomes unresponsive while building the 'vigra' package Leo Famulari
@ 2021-04-13 11:03 ` bo0od
2021-04-13 17:35 ` Leo Famulari
2021-04-14 8:21 ` Mark H Weaver
0 siblings, 2 replies; 17+ messages in thread
From: bo0od @ 2021-04-13 11:03 UTC (permalink / raw)
To: Leo Famulari; +Cc: 47717
> What kind of computer are you using? Are you using swap?
4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap
If this is not enough to install simple common used packages like
libreoffice or onionshare..etc then this is big issue if guix considered
to be targeting average users.
In Qubes distro 4GB is worthless/nothing the minimum is like 8GB and
above. If guix is the same thing then no problem but for surely it need
to be mentioned somewhere obvious(i didnt find it anywhere saying that).
> On Mon, Apr 12, 2021 at 05:39:11AM +0000, bo0od wrote:
>> I have used "guix pull" then "guix upgrade" one of the packages couldnt be
>> built but thats not the real issue, The real issue it caused guix to freeze
>> for like not less than 2+ hours and i couldnt do anything with the distro
>> until guix cut out the build/upgradation by itself.
>>
>> check the uploaded content.
>
> [...]
>
>> building /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv...
>> 42% [############################# ]builder for `/gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv' failed with exit code 1
>> build of /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv failed
>> View build log at '/var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2'.
>
> So, it failed to build 'vigra'. This package is notoriously expensive to
> build, although it's not expected that your computer would stop
> responding.
>
> What kind of computer are you using? Are you using swap?
>
> Ideally, we'd have a substitute for this...
>
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-12 18:41 ` bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure Tobias Geerinckx-Rice via Bug reports for GNU Guix
2021-04-12 22:59 ` raingloom
@ 2021-04-13 11:34 ` bo0od
2021-04-14 0:40 ` Tobias Geerinckx-Rice via Bug reports for GNU Guix
1 sibling, 1 reply; 17+ messages in thread
From: bo0od @ 2021-04-13 11:34 UTC (permalink / raw)
To: Tobias Geerinckx-Rice; +Cc: 47717
[-- Attachment #1: Type: text/plain, Size: 2697 bytes --]
> Your subject was quite dramatic and probably not true. Try to avoid
both.
yes sound dramatic but i couldnt describe what happened better. about
"not true" i posted the error message and i dunno if there is something
i can post describing when there is freeze.
> Take a look at (and next time, attach)
>
> $ bzless
>
/var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2
check the uploaded .txt file
> the log file mentioned in the error message. You'll probably find the
> string ‘Killed’ near the end. If you haven't rebooted yet,
>
> $ grep oom /proc/vmstat
i already rebooted the machine.
> but the root cause is
> you simply don't have enough memory to build this package at its default
> settings.
4G of ram not enough? That would be interesting if its not.
> there's a libreoffice substitute on ci.guix.gnu.org. Are substitutes
> configured and enabled?
No, i dont like workarounds because when i report bugs i try to put
myself in the position of new user. If substitutes are essentials for
users then it should be enabled by default , or switched automatically
if there is something bad happened like this issue. And if its not then
the default configurations has something need to be fixed/improved to
avoid issues like the one i have reported.
> Hi bo0od,
>
> Your subject was quite dramatic and probably not true. Try to avoid both.
>
> bo0od writes:
>> The real issue it caused guix to freeze for like not less than 2+
>> hours and i couldnt do anything with the distro until guix cut out
>> the build/upgradation by itself.
>
> Take a look at (and next time, attach)
>
> $ bzless
> /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2
>
> the log file mentioned in the error message. You'll probably find the
> string ‘Killed’ near the end. If you haven't rebooted yet,
>
> $ grep oom /proc/vmstat
>
> will probably return something non-zero.
>
> If so: you ran out of memory while building a heavy package. This
> causes your system to become unresponsive whilst it tries to postpone
> that for as long as possible. This is a fact of Linux.
>
> You can try to work around it by adding RAM, passing ‘-{M,c}1’ to the
> guix command that failed, and/or enabling swap, but the root cause is
> you simply don't have enough memory to build this package at its default
> settings.
>
> Or, you can make sure you download a substitute instead of trying to
> build everything locally. At the time of writing (commit d14f213)
> there's a libreoffice substitute on ci.guix.gnu.org. Are substitutes
> configured and enabled?
>
> Kind regards,
>
> T G-R
[-- Attachment #2: bzlessvigra.txt --]
[-- Type: text/plain, Size: 357588 bytes --]
------> /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2 <------
starting phase `set-SOURCE-DATE-EPOCH'
phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds
starting phase `set-paths'
environment variable `PATH' set to `/gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin:/gnu/store/l9910ppzvz628ddd84mg7q6axx9khrjc-doxygen-1.8.17/bin:/gnu/store/h8z924ip7ialjhd3sc2id5yh0jy7cj20-python-nose-1.3.7/bin:/gnu/store/bcgyg70rqvl1l70cnn1l844s5s7ixih3-python-sphinx-3.3.1/bin:/gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/bin:/gnu/store/02z5vgdhgxw4gcjvhx51mvy1ax4lzxmp-fftwf-3.3.8/bin:/gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/bin:/gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/bin:/gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/bin:/gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/bin:/gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/bin:/gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin:/gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/bin:/gnu/store/v6f44zccwh9z5zk3pjlywjybbi8n2hjh-tar-1.32/bin:/gnu/store/ncydgq2znms5n1d2k5yqshhf58nsixwv-gzip-1.10/bin:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/bin:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/bin:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/bin:/gnu/store/n4n560pfvvw50a9369axw5vj5rrqfj1n-diffutils-3.7/bin:/gnu/store/cd5qf3kcnlq35p9k392pjdpdzpsnds70-patch-2.7.6/bin:/gnu/store/hic7snhayfl7m6cpfqqr73nmm19bpqkg-findutils-4.7.0/bin:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/bin:/gnu/store/ishk7fswcs4gkwcp8mh788z4mvvl9bxh-sed-4.8/bin:/gnu/store/bhs4rj58v8j1narb2454raan2ps38xd8-grep-3.4/bin:/gnu/store/57xj5gcy1jbl9ai2lnrqnpr0dald9i65-coreutils-8.32/bin:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/bin:/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin:/gnu/store/mpa04aq8lblbcviyxywxcsb1zbi0mf39-ld-wrapper-0/bin:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/bin:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/bin:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/sbin:/gnu/store/az734qdm2iqz4lx5y2gk3521phshf94h-python-pygments-2.7.3/bin:/gnu/store/v7h3cchrrl299a9k7irm2s53g6hdrvs4-python-docutils-0.16/bin:/gnu/store/sp89l5zf1ynjb3q9mkxw4ciaypm98n4p-python-babel-2.9.0/bin:/gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/bin:/gnu/store/dgk1zxis6h0x0gnr9jxznlc2p8k65qvs-python-chardet-3.0.4/bin'
environment variable `CMAKE_PREFIX_PATH' set to `/gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/:/gnu/store/l9910ppzvz628ddd84mg7q6axx9khrjc-doxygen-1.8.17/:/gnu/store/h8z924ip7ialjhd3sc2id5yh0jy7cj20-python-nose-1.3.7/:/gnu/store/bcgyg70rqvl1l70cnn1l844s5s7ixih3-python-sphinx-3.3.1/:/gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/:/gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/:/gnu/store/02z5vgdhgxw4gcjvhx51mvy1ax4lzxmp-fftwf-3.3.8/:/gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/:/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/:/gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/:/gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/:/gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/:/gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/:/gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/:/gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/:/gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/:/gnu/store/v6f44zccwh9z5zk3pjlywjybbi8n2hjh-tar-1.32/:/gnu/store/ncydgq2znms5n1d2k5yqshhf58nsixwv-gzip-1.10/:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/:/gnu/store/n4n560pfvvw50a9369axw5vj5rrqfj1n-diffutils-3.7/:/gnu/store/cd5qf3kcnlq35p9k392pjdpdzpsnds70-patch-2.7.6/:/gnu/store/hic7snhayfl7m6cpfqqr73nmm19bpqkg-findutils-4.7.0/:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/:/gnu/store/ishk7fswcs4gkwcp8mh788z4mvvl9bxh-sed-4.8/:/gnu/store/bhs4rj58v8j1narb2454raan2ps38xd8-grep-3.4/:/gnu/store/57xj5gcy1jbl9ai2lnrqnpr0dald9i65-coreutils-8.32/:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/:/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/:/gnu/store/mpa04aq8lblbcviyxywxcsb1zbi0mf39-ld-wrapper-0/:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/:/gnu/store/s3dcqzwqaakv1yx37by9chksdbkgih17-glibc-2.31-static/:/gnu/store/hwcky7446s952w0mwchhmm211ll07zrq-glibc-utf8-locales-2.31/:/gnu/store/gz58xb7ggdpf7g5l77wb3gw66rikp5rb-python-sphinxcontrib-serializinghtml-1.1.4/:/gnu/store/grxk8nrd5nh03gx8n1cqi2zgchck8gd5-python-sphinxcontrib-qthelp-1.0.3/:/gnu/store/8zd1imgqg1ggr9qd29hbmyrnbm5xdlhs-python-sphinxcontrib-jsmath-1.0.1/:/gnu/store/0x07ki96md5qhbghgc3a16cshc110089-python-sphinxcontrib-htmlhelp-1.0.3/:/gnu/store/9cnwjzf5ga5dbn3b67j9xpg7lrd2dwdk-python-sphinxcontrib-devhelp-1.0.2/:/gnu/store/8cl3j6h7dfxxnr0w0k7x8is1j3v0f1ls-python-sphinxcontrib-applehelp-1.0.2/:/gnu/store/22xgrh49vc4fgs0xf4l9cpq839hr7nxs-python-sphinx-alabaster-theme-0.7.12/:/gnu/store/fxsr4k854z278d9gnrmgd8dikiqc7hs9-python-snowballstemmer-2.0.0/:/gnu/store/r38q2z7h822fgyrb87jfszhbdhbw516g-python-requests-2.25.0/:/gnu/store/az734qdm2iqz4lx5y2gk3521phshf94h-python-pygments-2.7.3/:/gnu/store/cwvjcqv6dxac6n6i72r9y0wpwhvrc658-python-packaging-20.0/:/gnu/store/ylajffxwyjpn1q5dmi6wwd2nx4phdidr-python-imagesize-1.2.0/:/gnu/store/hx45kbh7jyvhjrwjkpm66lfgm7jrprgm-python-jinja2-2.11.2/:/gnu/store/v7h3cchrrl299a9k7irm2s53g6hdrvs4-python-docutils-0.16/:/gnu/store/sp89l5zf1ynjb3q9mkxw4ciaypm98n4p-python-babel-2.9.0/:/gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/:/gnu/store/szzzh38b8xrxklw5dgjy2w1dx7ar65f6-python-urllib3-1.26.2/:/gnu/store/yrm65i78kysx2hmrdf4aypm5x62zh41z-python-idna-2.10/:/gnu/store/dgk1zxis6h0x0gnr9jxznlc2p8k65qvs-python-chardet-3.0.4/:/gnu/store/by3665c6y343h18z2fy6lr8js17xqv0r-python-certifi-2020.12.5/:/gnu/store/52b857zy3g0ga3pd8z0kzz49vhla57pf-python-six-1.14.0/:/gnu/store/j76bd461vfy8hyzwcwrxc8jki72iw69a-python-pyparsing-2.4.6/:/gnu/store/9v7c3sj48a0w7cfixr40dw2gfqp5fnik-python-markupsafe-1.1.1/:/gnu/store/s7wp7xc45sdph48j2a6vy4wf3384hhpc-python-pytz-2021.1/:/gnu/store/sjzaamc7zdiy4ia4rqk23y6pawrx0wrq-python-pysocks-1.7.1/:/gnu/store/65rkkb54knk63h6v6lfdwrc0rbwghvsc-python-pyopenssl-20.0.0/:/gnu/store/his503qyszs1ic9xc23vv59fw9dcziih-python-cryptography-3.3.1/:/gnu/store/r7hmdvss752nvn9ks2ps5m047krq923p-python-iso8601-0.1.13/:/gnu/store/7y9kkdqdg12k6jc7yi6hdfxp0q2z05dx-python-cffi-1.14.4/:/gnu/store/6w03a8ijb6g0i3niv4f7gzap2g5hgasx-python-asn1crypto-1.4.0/:/gnu/store/riphi84jvyjqz0r0i69lhwqrdgmdjvps-python-pycparser-2.20/'
environment variable `SSL_CERT_DIR' unset
environment variable `SSL_CERT_FILE' unset
environment variable `PYTHONPATH' set to `/gnu/store/h8z924ip7ialjhd3sc2id5yh0jy7cj20-python-nose-1.3.7/lib/python3.8/site-packages:/gnu/store/bcgyg70rqvl1l70cnn1l844s5s7ixih3-python-sphinx-3.3.1/lib/python3.8/site-packages:/gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages:/gnu/store/gz58xb7ggdpf7g5l77wb3gw66rikp5rb-python-sphinxcontrib-serializinghtml-1.1.4/lib/python3.8/site-packages:/gnu/store/grxk8nrd5nh03gx8n1cqi2zgchck8gd5-python-sphinxcontrib-qthelp-1.0.3/lib/python3.8/site-packages:/gnu/store/8zd1imgqg1ggr9qd29hbmyrnbm5xdlhs-python-sphinxcontrib-jsmath-1.0.1/lib/python3.8/site-packages:/gnu/store/0x07ki96md5qhbghgc3a16cshc110089-python-sphinxcontrib-htmlhelp-1.0.3/lib/python3.8/site-packages:/gnu/store/9cnwjzf5ga5dbn3b67j9xpg7lrd2dwdk-python-sphinxcontrib-devhelp-1.0.2/lib/python3.8/site-packages:/gnu/store/8cl3j6h7dfxxnr0w0k7x8is1j3v0f1ls-python-sphinxcontrib-applehelp-1.0.2/lib/python3.8/site-packages:/gnu/store/22xgrh49vc4fgs0xf4l9cpq839hr7nxs-python-sphinx-alabaster-theme-0.7.12/lib/python3.8/site-packages:/gnu/store/fxsr4k854z278d9gnrmgd8dikiqc7hs9-python-snowballstemmer-2.0.0/lib/python3.8/site-packages:/gnu/store/r38q2z7h822fgyrb87jfszhbdhbw516g-python-requests-2.25.0/lib/python3.8/site-packages:/gnu/store/az734qdm2iqz4lx5y2gk3521phshf94h-python-pygments-2.7.3/lib/python3.8/site-packages:/gnu/store/cwvjcqv6dxac6n6i72r9y0wpwhvrc658-python-packaging-20.0/lib/python3.8/site-packages:/gnu/store/ylajffxwyjpn1q5dmi6wwd2nx4phdidr-python-imagesize-1.2.0/lib/python3.8/site-packages:/gnu/store/hx45kbh7jyvhjrwjkpm66lfgm7jrprgm-python-jinja2-2.11.2/lib/python3.8/site-packages:/gnu/store/v7h3cchrrl299a9k7irm2s53g6hdrvs4-python-docutils-0.16/lib/python3.8/site-packages:/gnu/store/sp89l5zf1ynjb3q9mkxw4ciaypm98n4p-python-babel-2.9.0/lib/python3.8/site-packages:/gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/lib/python3.8/site-packages:/gnu/store/szzzh38b8xrxklw5dgjy2w1dx7ar65f6-python-urllib3-1.26.2/lib/python3.8/site-packages:/gnu/store/yrm65i78kysx2hmrdf4aypm5x62zh41z-python-idna-2.10/lib/python3.8/site-packages:/gnu/store/dgk1zxis6h0x0gnr9jxznlc2p8k65qvs-python-chardet-3.0.4/lib/python3.8/site-packages:/gnu/store/by3665c6y343h18z2fy6lr8js17xqv0r-python-certifi-2020.12.5/lib/python3.8/site-packages:/gnu/store/52b857zy3g0ga3pd8z0kzz49vhla57pf-python-six-1.14.0/lib/python3.8/site-packages:/gnu/store/j76bd461vfy8hyzwcwrxc8jki72iw69a-python-pyparsing-2.4.6/lib/python3.8/site-packages:/gnu/store/9v7c3sj48a0w7cfixr40dw2gfqp5fnik-python-markupsafe-1.1.1/lib/python3.8/site-packages:/gnu/store/s7wp7xc45sdph48j2a6vy4wf3384hhpc-python-pytz-2021.1/lib/python3.8/site-packages:/gnu/store/sjzaamc7zdiy4ia4rqk23y6pawrx0wrq-python-pysocks-1.7.1/lib/python3.8/site-packages:/gnu/store/65rkkb54knk63h6v6lfdwrc0rbwghvsc-python-pyopenssl-20.0.0/lib/python3.8/site-packages:/gnu/store/his503qyszs1ic9xc23vv59fw9dcziih-python-cryptography-3.3.1/lib/python3.8/site-packages:/gnu/store/r7hmdvss752nvn9ks2ps5m047krq923p-python-iso8601-0.1.13/lib/python3.8/site-packages:/gnu/store/7y9kkdqdg12k6jc7yi6hdfxp0q2z05dx-python-cffi-1.14.4/lib/python3.8/site-packages:/gnu/store/6w03a8ijb6g0i3niv4f7gzap2g5hgasx-python-asn1crypto-1.4.0/lib/python3.8/site-packages:/gnu/store/riphi84jvyjqz0r0i69lhwqrdgmdjvps-python-pycparser-2.20/lib/python3.8/site-packages'
environment variable `BASH_LOADABLES_PATH' unset
environment variable `C_INCLUDE_PATH' set to `/gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/include:/gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/include:/gnu/store/02z5vgdhgxw4gcjvhx51mvy1ax4lzxmp-fftwf-3.3.8/include:/gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/include:/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include:/gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/include:/gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/include:/gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/include:/gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include:/gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/include:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include'
environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/include:/gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/include:/gnu/store/02z5vgdhgxw4gcjvhx51mvy1ax4lzxmp-fftwf-3.3.8/include:/gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/include:/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include:/gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/include:/gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/include:/gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/include:/gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include:/gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/include:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include'
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environment variable `GUIX_LOCPATH' set to `/gnu/store/hwcky7446s952w0mwchhmm211ll07zrq-glibc-utf8-locales-2.31/lib/locale'
phase `set-paths' succeeded after 0.0 seconds
starting phase `install-locale'
using 'en_US.utf8' locale for category "LC_ALL"
phase `install-locale' succeeded after 0.0 seconds
starting phase `unpack'
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vigra-1.11.1/test/sifImport/testSif_4_13_30000.sif
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vigra-1.11.1/test/sifImport/testSif_4_6_30000.sif
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vigra-1.11.1/test/tensorimaging/boundaryTensor.xv
vigra-1.11.1/test/tensorimaging/l2.xv
vigra-1.11.1/test/tensorimaging/l2_boundary.xv
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vigra-1.11.1/vigranumpy/src/core/construct_custodian_for.hpp
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phase `unpack' succeeded after 3.1 seconds
starting phase `disable-broken-tests'
phase `disable-broken-tests' succeeded after 0.0 seconds
starting phase `patch-usr-bin-file'
phase `patch-usr-bin-file' succeeded after 0.0 seconds
starting phase `patch-source-shebangs'
patch-shebang: ./config/update-gh-pages.sh.in: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash'
patch-shebang: ./config/vigra-config.in: changing `/usr/bin/env python' to `/gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python'
patch-shebang: ./docsrc/makeFunctionIndex.py: changing `/usr/bin/env python' to `/gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python'
patch-shebang: ./docsrc/post.py: changing `/usr/bin/env python' to `/gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python'
phase `patch-source-shebangs' succeeded after 0.4 seconds
starting phase `configure'
source directory: "/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1" (relative from build: "../vigra-1.11.1")
build directory: "/tmp/guix-build-vigra-1.11.1.drv-0/build"
running 'cmake' with arguments ("../vigra-1.11.1" "-DCMAKE_BUILD_TYPE=RelWithDebInfo" "-DCMAKE_INSTALL_PREFIX=/gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1" "-DCMAKE_INSTALL_LIBDIR=lib" "-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE" "-DCMAKE_INSTALL_RPATH=/gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/lib" "-DCMAKE_VERBOSE_MAKEFILE=ON" "-Wno-dev" "-DVIGRANUMPY_INSTALL_DIR=/gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/lib/python3.8/site-packages" "-DWITH_OPENEXR=1" "-DCMAKE_C_FLAGS=-ffloat-store" "-DCMAKE_CXX_FLAGS=-I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store")
-- The C compiler identification is GNU 7.5.0
-- The CXX compiler identification is GNU 7.5.0
-- Check for working C compiler: /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc
-- Check for working C compiler: /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++
-- Check for working CXX compiler: /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring VIGRA version 1.11.1
-- Checking template recursion depth: ok
-- Searching for ZLIB
-- in default locations
-- Found ZLIB: /gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/libz.so (found version "1.2.11")
-- Searching for TIFF
-- in default locations
-- Found TIFF: /gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/lib/libtiff.so (found version "4.1.0")
-- Searching for JPEG
-- in default locations
-- Found JPEG: /gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/lib/libjpeg.so (found version "62")
-- Searching for PNG
-- in default locations
-- Found PNG: /gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/lib/libpng.so (found version "1.6.37")
-- Searching for FFTW3
-- in default locations
-- Found FFTW3: /gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/lib/libfftw3.so
-- Searching for FFTW3F
-- in default locations
-- Found FFTW3F: /gnu/store/02z5vgdhgxw4gcjvhx51mvy1ax4lzxmp-fftwf-3.3.8/lib/libfftw3f.so
-- Searching for OpenEXR
-- in default locations
-- Found OpenEXR: /gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libHalf.so
-- Searching for HDF5
-- in default locations
-- Checking HDF5 version (at least 1.8): ok
-- Found HDF5: /gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/lib/libhdf5.so
-- Found Doxygen: /gnu/store/l9910ppzvz628ddd84mg7q6axx9khrjc-doxygen-1.8.17/bin/doxygen (found version "1.8.17") found components: doxygen
-- Found PythonInterp: /gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python (found version "3.8.2")
-- Searching for Boost (at least version 1.40.0)
-- in default locations
-- Found Boost: /gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/lib/cmake/Boost-1.72.0/BoostConfig.cmake (found suitable version "1.72.0", minimum required is "1.40.0")
-- Checking for threading support: std::thread
-- (added compiler flags: -pthread -std=c++11)
-- Detected C++ version: 201103
-- Checking VIGRANUMPY_DEPENDENCIES
-- Using Python 3.8.2 at /gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python
-- Found Python includes: /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8
-- Found Python library: /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/lib/libpython3.8.so
-- Found boost_python library: /gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/lib/libboost_python3.so
-- Searching for Python numpy: ok
-- Searching for Python nosetests: ok
-- Searching for sphinx documentation generator: ok
-- Found VIGRANUMPY_DEPENDENCIES: TRUE
-- ---------------------------------------------------------
-- VIGRA configuration information:
-- ---------------------------------------------------------
-- Using ZLIB libraries: /gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/libz.so
-- Using PNG libraries: /gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/lib/libpng.so;/gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/libz.so
-- Using TIFF libraries: /gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/lib/libtiff.so
-- Using JPEG libraries: /gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/lib/libjpeg.so
-- Using OpenEXR libraries: /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/lib/libIlmImf.so;/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libImath.so;/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libHalf.so;/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libIex.so;/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libIlmThread.so
-- Using FFTW libraries: /gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/lib/libfftw3.so
-- Using HDF5 libraries: /gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/lib/libhdf5.so;/gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/lib/libhdf5_hl.so;/gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/libz.so
-- Using Boost Graph Library: /gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/include/boost/graph
-- LEMON graph library disabled by user (WITH_LEMON=0)
-- Using Python libraries: /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/lib/libpython3.8.so;/gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/lib/libboost_python3.so
-- Using Numpy includes: /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include
-- ---------------------------------------------------------
-- building shared lib
-- binaries will be generated in: /tmp/guix-build-vigra-1.11.1.drv-0/build
-- manuals will be generated in: /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/doc
-- ---------------------------------------------------------
-- includes will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/include
-- libraries will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/lib
-- binaries will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/bin
-- vigra manuals will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/doc/vigra/index.html
-- vigranumpy will be installed at /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/lib/python3.8/site-packages
-- vigranumpy manuals will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/doc/vigranumpy/html/index.html
-- ---------------------------------------------------------
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_INSTALL_LIBDIR
-- Build files have been written to: /tmp/guix-build-vigra-1.11.1.drv-0/build
phase `configure' succeeded after 3.9 seconds
starting phase `patch-generated-file-shebangs'
phase `patch-generated-file-shebangs' succeeded after 0.1 seconds
starting phase `build'
/gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -S/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 -B/tmp/guix-build-vigra-1.11.1.drv-0/build --check-build-system CMakeFiles/Makefile.cmake 0
/gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_progress_start /tmp/guix-build-vigra-1.11.1.drv-0/build/CMakeFiles /tmp/guix-build-vigra-1.11.1.drv-0/build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
make -f src/impex/CMakeFiles/vigraimpex.dir/build.make src/impex/CMakeFiles/vigraimpex.dir/depend
make -f vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/depend
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/DependInfo.cmake --color=
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex/CMakeFiles/vigraimpex.dir/DependInfo.cmake --color=
Scanning dependencies of target vigraimpex
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
make -f src/impex/CMakeFiles/vigraimpex.dir/build.make src/impex/CMakeFiles/vigraimpex.dir/build
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
[ 0%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/bmp.cxx.o
Scanning dependencies of target vigranumpy_filters
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/bmp.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/bmp.cxx
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
make -f vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/build
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
[ 3%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/kernel.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/kernel.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx
[ 3%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/byteorder.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/byteorder.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/byteorder.cxx
[ 7%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/codecmanager.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/codecmanager.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/codecmanager.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:43:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:40:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:43:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:40:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/vigranumpykernel.hxx:4:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:45:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/vigranumpykernel.hxx:5:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:45:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
[ 7%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/compression.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/compression.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/compression.cxx
[ 11%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/exr.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/exr.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/exr.cxx
[ 11%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/gif.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/gif.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/gif.cxx
[ 11%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/hdr.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/hdr.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdr.cxx
[ 11%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/convolution.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/convolution.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx
[ 15%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/hdf5impex.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/hdf5impex.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdimage.hxx:42,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/impex.hxx:51,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/hdf5impex.hxx:77,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxx:38:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/hdf5impex.hxx:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxx:38:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdimage.hxx:42,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/impex.hxx:51,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/hdf5impex.hxx:77,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxx:38:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/hdf5impex.hxx:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxx:38:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
[ 15%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/hdf5_rf_impex.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/hdf5_rf_impex.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:42:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:40:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:42:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:40:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:43:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:45:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:45:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/matrix.hxx:43,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest.hxx:49,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest_hdf5_impex.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxx:38:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest_hdf5_impex.hxx:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxx:38:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/matrix.hxx:43,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest.hxx:49,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest_hdf5_impex.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxx:38:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest_hdf5_impex.hxx:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxx:38:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
[ 15%] Building C object src/impex/CMakeFiles/vigraimpex.dir/iccjpeg.c.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/iccjpeg.c.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/iccjpeg.c
[ 19%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/imageinfo.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/imageinfo.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_impex.hxx:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxx:64:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/locale_classes.h:40,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/ios_base.h:41,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ios:42,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ostream:38,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/iostream:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxx:46:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_impex.hxx:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxx:64:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/locale_classes.h:40,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/ios_base.h:41,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ios:42,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ostream:38,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/iostream:39,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxx:46:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
[ 19%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/jpeg.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/jpeg.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/jpeg.cxx
[ 19%] Building C object src/impex/CMakeFiles/vigraimpex.dir/lz4.c.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/lz4.c.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/lz4.c
[ 23%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/png.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/png.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/png.cxx
[ 23%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/pnm.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/pnm.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/pnm.cxx
[ 23%] Building C object src/impex/CMakeFiles/vigraimpex.dir/rgbe.c.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/rgbe.c.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/rgbe.c
[ 26%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/sifImport.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/sifImport.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/sifImport.hxx:61,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxx:57:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/locale_classes.h:40,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/ios_base.h:41,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ios:42,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/istream:38,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/fstream:38,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/sifImport.hxx:57,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxx:57:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/sifImport.hxx:61,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxx:57:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/locale_classes.h:40,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/ios_base.h:41,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ios:42,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/istream:38,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/fstream:38,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/sifImport.hxx:57,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxx:57:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
[ 26%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/sun.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/sun.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sun.cxx
[ 30%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/tiff.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/tiff.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/tiff.cxx
[ 30%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/viff.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/viff.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/viff.cxx
[ 30%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/void_vector.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/void_vector.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/void_vector.cxx
[ 34%] Linking CXX shared library libvigraimpex.so
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_link_script CMakeFiles/vigraimpex.dir/link.txt --verbose=1
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -fPIC -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -shared -Wl,-soname,libvigraimpex.so.11 -o libvigraimpex.so.11.1.11.1 CMakeFiles/vigraimpex.dir/bmp.cxx.o CMakeFiles/vigraimpex.dir/byteorder.cxx.o CMakeFiles/vigraimpex.dir/codecmanager.cxx.o CMakeFiles/vigraimpex.dir/compression.cxx.o CMakeFiles/vigraimpex.dir/exr.cxx.o CMakeFiles/vigraimpex.dir/gif.cxx.o CMakeFiles/vigraimpex.dir/hdr.cxx.o CMakeFiles/vigraimpex.dir/hdf5impex.cxx.o CMakeFiles/vigraimpex.dir/hdf5_rf_impex.cxx.o CMakeFiles/vigraimpex.dir/iccjpeg.c.o CMakeFiles/vigraimpex.dir/imageinfo.cxx.o CMakeFiles/vigraimpex.dir/jpeg.cxx.o CMakeFiles/vigraimpex.dir/lz4.c.o CMakeFiles/vigraimpex.dir/png.cxx.o CMakeFiles/vigraimpex.dir/pnm.cxx.o CMakeFiles/vigraimpex.dir/rgbe.c.o CMakeFiles/vigraimpex.dir/sifImport.cxx.o CMakeFiles/vigraimpex.dir/sun.cxx.o CMakeFiles/vigraimpex.dir/tiff.cxx.o CMakeFiles/vigraimpex.dir/viff.cxx.o CMakeFiles/vigraimpex.dir/void_vector.cxx.o -Wl,-rpath,:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: -ljpeg -lpng -lz -ltiff -lIlmImf -lImath -lHalf -lIex -lIlmThread -lhdf5 -lhdf5_hl -lz -lz -ltiff -lIlmImf -lImath -lHalf -lIex -lIlmThread -lhdf5 -lhdf5_hl
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_symlink_library libvigraimpex.so.11.1.11.1 libvigraimpex.so.11 libvigraimpex.so
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
[ 34%] Built target vigraimpex
make -f vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/depend
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/DependInfo.cmake --color=
Scanning dependencies of target vigranumpy_sampling
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
make -f vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/build
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
[ 34%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/sampling.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_sampling_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_sampling.dir/sampling.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/resizeimage.hxx:45:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:43:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
[ 34%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/filters.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/filters.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/resizeimage.hxx:45:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdimagefunctions.hxx:74,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/nonlineardiffusion.hxx:41,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:41:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/symmetry.hxx:42,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:42:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/tensors.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/tensors.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_convolution.hxx:41:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:41:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/boundarytensor.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:42:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
[ 38%] Linking CXX shared library sampling.so
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_link_script CMakeFiles/vigranumpy_sampling.dir/link.txt --verbose=1
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -fPIC -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -shared -Wl,-soname,sampling.so -o sampling.so CMakeFiles/vigranumpy_sampling.dir/sampling.cxx.o -Wl,-rpath,:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: -lpython3.8 -lboost_python3
Copying target vigranumpy_sampling to temporary module directory
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E copy_if_different /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/sampling.so /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/vigra/
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
[ 38%] Built target vigranumpy_sampling
make -f vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/depend
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/DependInfo.cmake --color=
Scanning dependencies of target vigranumpy_colors
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
make -f vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/build
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/colors.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_colors_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_colors.dir/colors.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxx:40:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxx:40:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxx:40:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxx:40:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
[ 38%] Linking CXX shared library colors.so
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_link_script CMakeFiles/vigranumpy_colors.dir/link.txt --verbose=1
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -fPIC -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -shared -Wl,-soname,colors.so -o colors.so CMakeFiles/vigranumpy_colors.dir/colors.cxx.o -Wl,-rpath,:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: -lpython3.8 -lboost_python3
Copying target vigranumpy_colors to temporary module directory
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E copy_if_different /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/colors.so /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/vigra/
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
[ 38%] Built target vigranumpy_colors
make -f vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/depend
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/DependInfo.cmake --color=
Scanning dependencies of target vigranumpy_analysis
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
make -f vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/build
make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/segmentation.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_analysis_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_analysis.dir/segmentation.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/resizeimage.hxx:45:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdimagefunctions.hxx:74,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/seededregiongrowing.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/watersheds.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:43:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:50:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/morphology.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/morphology.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/resizeimage.hxx:45:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_resize.hxx:41,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/eccentricitytransform.hxx:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:45:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
c++: internal compiler error: Killed (program cc1plus)
Please submit a full bug report,
with preprocessed source if appropriate.
See <https://gcc.gnu.org/bugs/> for instructions.
make[2]: *** [vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/build.make:66: vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/segmentation.cxx.o] Error 4
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
make[1]: *** [CMakeFiles/Makefile2:4075: vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/non_local_mean.cxx.o
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/non_local_mean.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:39:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations]
VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType)
^
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’
class FunctorTraits<name<T> > \
^~~~
In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0,
from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:39:
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_convolution.hxx:41:0,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/non_local_mean.hxx:61,
from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:41:
/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(PreconditionViolation)
^~~~~
[ 42%] Linking CXX shared library filters.so
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_link_script CMakeFiles/vigranumpy_filters.dir/link.txt --verbose=1
/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -fPIC -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -shared -Wl,-soname,filters.so -o filters.so CMakeFiles/vigranumpy_filters.dir/kernel.cxx.o CMakeFiles/vigranumpy_filters.dir/convolution.cxx.o CMakeFiles/vigranumpy_filters.dir/filters.cxx.o CMakeFiles/vigranumpy_filters.dir/tensors.cxx.o CMakeFiles/vigranumpy_filters.dir/morphology.cxx.o CMakeFiles/vigranumpy_filters.dir/non_local_mean.cxx.o -Wl,-rpath,:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: -lpython3.8 -lboost_python3
Copying target vigranumpy_filters to temporary module directory
cd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E copy_if_different /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/filters.so /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/vigra/
make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
[ 42%] Built target vigranumpy_filters
make[1]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'
make: *** [Makefile:166: all] Error 2
command "make" "-j" "2" failed with status 2
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix becomes unresponsive while building the 'vigra' package
2021-04-13 11:03 ` bo0od
@ 2021-04-13 17:35 ` Leo Famulari
2021-04-14 16:06 ` bo0od
2021-04-14 8:21 ` Mark H Weaver
1 sibling, 1 reply; 17+ messages in thread
From: Leo Famulari @ 2021-04-13 17:35 UTC (permalink / raw)
To: bo0od; +Cc: 47717
On Tue, Apr 13, 2021 at 11:03:50AM +0000, bo0od wrote:
> 4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap
>
> If this is not enough to install simple common used packages like
> libreoffice or onionshare..etc then this is big issue if guix considered to
> be targeting average users.
>
> In Qubes distro 4GB is worthless/nothing the minimum is like 8GB and above.
> If guix is the same thing then no problem but for surely it need to be
> mentioned somewhere obvious(i didnt find it anywhere saying that).
The ideal situation is that substitutes for these packages are
available, and you don't have to build them.
Using current Guix master branch, I receive a substitute for
libreoffice. Maybe you just need to update, with `guix pull`?
In general, if you want to compile software, there will be some programs
that require a lot of computer to compile. Not even 10 GB RAM will be
enough in all cases.
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-13 11:34 ` bo0od
@ 2021-04-14 0:40 ` Tobias Geerinckx-Rice via Bug reports for GNU Guix
2021-04-14 16:54 ` bo0od
0 siblings, 1 reply; 17+ messages in thread
From: Tobias Geerinckx-Rice via Bug reports for GNU Guix @ 2021-04-14 0:40 UTC (permalink / raw)
To: bo0od; +Cc: 47717
[-- Attachment #1: Type: text/plain, Size: 2039 bytes --]
bo0od writes:
> yes sound dramatic but i couldnt describe what happened better.
I mean the ‘outrageously’ part. When Linux runs out of memory, it
freezes up. Moral judgment is futile. Better to adopt
raingloom's earlyoom suggestion or similar.
> /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2
>
> check the uploaded .txt file
I did, hence the question. ;-) The file I asked for is missing.
> 4G of ram not enough? That would be interesting if its not.
Prepare to be interested, I guess... y... yaay...
4 GiB is absolutely not enough to build an outrageous amount of
‘modern’ software, especially in parallel (so not using --cores=1
--max-jobs=1) to make use of those expensive cores.
I'm disgusted too.
> No, i dont like workarounds
Oh, nor do I. My point is this isn't a bug in Guix, so it's not a
bug we can ‘fix’. A ‘workaround’ is the best we can do.
For example, one such workaround would be to ask the user whether
they want to run the daemon in ‘slow mode’ (--cores=1 --max-jobs=1
etc.) if we detect <N GiB of RAM during installation.
But with only 4 GiB of RAM and -j1 some ‘modern’ things will still
fail. At that point you offload or accept substitutes, and I
think doing either selectively is pointless.
> If substitutes are essentials for users then it should be
> enabled by
> default ,
I didn't say they were essential; they're not. They're an
alternative to downloading more RAM.
I think the installer now asks whether you want to enable
substitutes. Do you remember if it did? If you chose not to, why
not, and do you feel like you were making an informed decision?
> or switched automatically if there is something bad happened
> like this
> issue.
This won't happen. Enabling substitutes requires informed
administrator consent. If that's an issue -- and I bet it is! --
we need to do a better job educating them during installation, no
later.
Kind regards,
T G-R
[-- Attachment #2: signature.asc --]
[-- Type: application/pgp-signature, Size: 247 bytes --]
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix becomes unresponsive while building the 'vigra' package
2021-04-13 11:03 ` bo0od
2021-04-13 17:35 ` Leo Famulari
@ 2021-04-14 8:21 ` Mark H Weaver
2021-04-14 17:08 ` bo0od
1 sibling, 1 reply; 17+ messages in thread
From: Mark H Weaver @ 2021-04-14 8:21 UTC (permalink / raw)
To: bo0od, Leo Famulari; +Cc: 47717
bo0od <bo0od@riseup.net> writes:
> > What kind of computer are you using? Are you using swap?
>
> 4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap
For the record: I don't use binary substitutes at all, and I build my
GNOME system plus IceCat locally, using Guix, on a modest Thinkpad X200
with 4GB of RAM and 8GB of swap, all while running a GNOME session with
Emacs.
I can build _most_ (but not all) packages while running IceCat.
However, some builds, e.g. IceCat and WebKitGTK, require too much memory
to build while simultaneously running a modern web browser.
I haven't tried to build Libreoffice recently, but I did so regularly a
few years ago.
* * *
I suspect that your problem is that you have too many CPUs relative to
your relatively modest 4GB of RAM. The more CPUs you have, the more
compilers will be run concurrently (by default), and the more RAM you
will need.
In my case, I have only 2 CPUs on my system, so I have only two
instances of GCC (or whatever compiler) running at any given time.
It might help to pass --cores=2 (or perhaps even --cores=1) to
guix-daemon, which should hopefully be honored by the build systems of
most of our packages, but probably not all (bug reports welcome).
On a Guix system, you can arrange for this in your OS config with
something like the following (untested):
__ (modify-services %desktop-services
____ (guix-service-type config =>
_______________________ (guix-configuration
_________________________ (inherit config)
_________________________ (extra-options '("--cores=2")))))
Mark
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix becomes unresponsive while building the 'vigra' package
2021-04-13 17:35 ` Leo Famulari
@ 2021-04-14 16:06 ` bo0od
0 siblings, 0 replies; 17+ messages in thread
From: bo0od @ 2021-04-14 16:06 UTC (permalink / raw)
To: Leo Famulari; +Cc: 47717
> The ideal situation is that substitutes for these packages are
> available, and you don't have to build them.
Does that mean almost every user who gonna use guix system which will
eventually fall into the same issue you gonna tell oh sorry default
doesnt help do 123? we need solutions for the future, solutions for the
coming users not workarounds.
> In general, if you want to compile software, there will be some programs
> that require a lot of computer to compile. Not even 10 GB RAM will be
> enough in all cases.
Im doing what guix default doing, didnt play with anything and if the
default may require more than 10GB of rams this distro wont reach the
sunlight for the end, Because even if it reaches he gonna delete it
later due to issues similar to this one.
Check this:
https://forums.whonix.org/t/constrained-system-resources-program-starter-wrapper/10914
maybe something like this if guix devs done will solve alot of headaches.
Leo Famulari:
> On Tue, Apr 13, 2021 at 11:03:50AM +0000, bo0od wrote:
>> 4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap
>>
>> If this is not enough to install simple common used packages like
>> libreoffice or onionshare..etc then this is big issue if guix considered to
>> be targeting average users.
>>
>> In Qubes distro 4GB is worthless/nothing the minimum is like 8GB and above.
>> If guix is the same thing then no problem but for surely it need to be
>> mentioned somewhere obvious(i didnt find it anywhere saying that).
>
> The ideal situation is that substitutes for these packages are
> available, and you don't have to build them.
>
> Using current Guix master branch, I receive a substitute for
> libreoffice. Maybe you just need to update, with `guix pull`?
>
> In general, if you want to compile software, there will be some programs
> that require a lot of computer to compile. Not even 10 GB RAM will be
> enough in all cases.
>
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-14 0:40 ` Tobias Geerinckx-Rice via Bug reports for GNU Guix
@ 2021-04-14 16:54 ` bo0od
2021-04-15 19:56 ` Mark H Weaver
0 siblings, 1 reply; 17+ messages in thread
From: bo0od @ 2021-04-14 16:54 UTC (permalink / raw)
To: Tobias Geerinckx-Rice; +Cc: 47717
> I mean the ‘outrageously’ part. When Linux runs out of memory, it
> freezes up. Moral judgment is futile. Better to adopt raingloom's
> earlyoom suggestion or similar.
Im using default guix system nothing special, If this package usable to
solve these stuff i suggest then to include it by default.
I suggest as well to take a look at solutions similar to this one:
https://forums.whonix.org/t/constrained-system-resources-program-starter-wrapper/10914
or even at least possibility of switch virtual console, login as
different user and kill the broken processes exhausting system resources.
> I did, hence the question. ;-) The file I asked for is missing.
No, Please check the ticket on the website as i provided the needed log
as .txt file but somehow the website(guix issues) fetching it to plain
text and seems it didnt reach to you. Here is the link to the ticket:
https://issues.guix.gnu.org/47717
> 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’
> software, especially in parallel (so not using --cores=1 --max-jobs=1)
> to make use of those expensive cores.
>
> I'm disgusted too.
Yes it is, But you know this cant be a way of life with guix for end
user no? Something by default should solve this matter otherwise this is
not usable distro.
> Oh, nor do I. My point is this isn't a bug in Guix, so it's not a bug
> we can ‘fix’. A ‘workaround’ is the best we can do.
So you gonna wait for every user to open xyz tickets and you gonna
answer them 1 by 1 the same answer this is not our issue? I dont see
this is good idea even if its true its not entirely guix issue but guix
need to find out something to close this gap otherwise prepare to see
more like this report.
> I think the installer now asks whether you want to enable substitutes.
> Do you remember if it did? If you chose not to, why not, and do you
> feel like you were making an informed decision?
I used manual installation, didnt see this.
> This won't happen. Enabling substitutes requires informed administrator
> consent. If that's an issue -- and I bet it is! -- we need to do a
> better job educating them during installation, no later.
Yes if guix can indicate the amount of RAM is low then it can popup a
message telling the user due to low RAM and to avoid resources
exhausting would you like to activate x to avoid this issue? <-
something like this can be done.
Tobias Geerinckx-Rice:
> bo0od writes:
>> yes sound dramatic but i couldnt describe what happened better.
>
> I mean the ‘outrageously’ part. When Linux runs out of memory, it
> freezes up. Moral judgment is futile. Better to adopt raingloom's
> earlyoom suggestion or similar.
>
>> /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2
>>
>> check the uploaded .txt file
>
> I did, hence the question. ;-) The file I asked for is missing.
>
>> 4G of ram not enough? That would be interesting if its not.
>
> Prepare to be interested, I guess... y... yaay...
>
> 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’
> software, especially in parallel (so not using --cores=1 --max-jobs=1)
> to make use of those expensive cores.
>
> I'm disgusted too.
>
>> No, i dont like workarounds
>
> Oh, nor do I. My point is this isn't a bug in Guix, so it's not a bug
> we can ‘fix’. A ‘workaround’ is the best we can do.
>
> For example, one such workaround would be to ask the user whether they
> want to run the daemon in ‘slow mode’ (--cores=1 --max-jobs=1 etc.) if
> we detect <N GiB of RAM during installation.
>
> But with only 4 GiB of RAM and -j1 some ‘modern’ things will still
> fail. At that point you offload or accept substitutes, and I think
> doing either selectively is pointless.
>
>> If substitutes are essentials for users then it should be enabled by
>> default ,
>
> I didn't say they were essential; they're not. They're an alternative
> to downloading more RAM.
>
> I think the installer now asks whether you want to enable substitutes.
> Do you remember if it did? If you chose not to, why not, and do you
> feel like you were making an informed decision?
>
>> or switched automatically if there is something bad happened like this
>> issue.
>
> This won't happen. Enabling substitutes requires informed administrator
> consent. If that's an issue -- and I bet it is! -- we need to do a
> better job educating them during installation, no later.
>
> Kind regards,
>
> T G-R
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix becomes unresponsive while building the 'vigra' package
2021-04-14 8:21 ` Mark H Weaver
@ 2021-04-14 17:08 ` bo0od
0 siblings, 0 replies; 17+ messages in thread
From: bo0od @ 2021-04-14 17:08 UTC (permalink / raw)
To: Mark H Weaver, Leo Famulari; +Cc: 47717
> It might help to pass --cores=2 (or perhaps even --cores=1) to
> guix-daemon, which should hopefully be honored by the build systems of
> most of our packages, but probably not all (bug reports welcome).
Thanks for the suggestion, But you know this is gonna be mouse and cat
issue if its not fixed by default for the end user.
- No warning in the docs saying that guix not intended to be for end
user with average pc resources (if no body willing to give solution by
default).
- No popup telling the user your pc resources/rams (whatever) are low
please allow the usage of substitutes for this package in order to avoid
possible machine exhausting/freezing <- or any similar message.
...etc from similar ideas.
But leaving it to the air whenever happen it happen and user later
discover that guix just refrigerator/freezer tool then wonder why would
the user keep using it...
Mark H Weaver:
> bo0od <bo0od@riseup.net> writes:
>
>> > What kind of computer are you using? Are you using swap?
>>
>> 4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap
>
> For the record: I don't use binary substitutes at all, and I build my
> GNOME system plus IceCat locally, using Guix, on a modest Thinkpad X200
> with 4GB of RAM and 8GB of swap, all while running a GNOME session with
> Emacs.
>
> I can build _most_ (but not all) packages while running IceCat.
> However, some builds, e.g. IceCat and WebKitGTK, require too much memory
> to build while simultaneously running a modern web browser.
>
> I haven't tried to build Libreoffice recently, but I did so regularly a
> few years ago.
>
> * * *
>
> I suspect that your problem is that you have too many CPUs relative to
> your relatively modest 4GB of RAM. The more CPUs you have, the more
> compilers will be run concurrently (by default), and the more RAM you
> will need.
>
> In my case, I have only 2 CPUs on my system, so I have only two
> instances of GCC (or whatever compiler) running at any given time.
>
> It might help to pass --cores=2 (or perhaps even --cores=1) to
> guix-daemon, which should hopefully be honored by the build systems of
> most of our packages, but probably not all (bug reports welcome).
>
> On a Guix system, you can arrange for this in your OS config with
> something like the following (untested):
>
> __ (modify-services %desktop-services
> ____ (guix-service-type config =>
> _______________________ (guix-configuration
> _________________________ (inherit config)
> _________________________ (extra-options '("--cores=2")))))
>
> Mark
>
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-14 16:54 ` bo0od
@ 2021-04-15 19:56 ` Mark H Weaver
2021-04-16 3:08 ` bo0od
2021-04-21 1:35 ` Maxim Cournoyer
0 siblings, 2 replies; 17+ messages in thread
From: Mark H Weaver @ 2021-04-15 19:56 UTC (permalink / raw)
To: bo0od, Tobias Geerinckx-Rice; +Cc: 47717
bo0od <bo0od@riseup.net> writes:
> > I mean the ‘outrageously’ part. When Linux runs out of memory, it
> > freezes up. Moral judgment is futile. Better to adopt raingloom's
> > earlyoom suggestion or similar.
>
> Im using default guix system nothing special, If this package usable to
> solve these stuff i suggest then to include it by default.
'earlyoom' behavior is not necessarily desirable. I, for one, have a
fairly old computer by today's standards, and sometimes I ask it to do
intensive things that are at the edge of its capabilities, such as
compiling GNU IceCat. An aggressive 'earlyoom' might prematurely abort
jobs that could have completed, and thereby make it impossible for me to
continue using this old computer for development.
With that in mind, it's far from clear that 'earlyoom' should be our
default behavior. It's good to have it as an option, though.
> > 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’
> > software, especially in parallel (so not using --cores=1 --max-jobs=1)
> > to make use of those expensive cores.
> >
> > I'm disgusted too.
>
> Yes it is, But you know this cant be a way of life with guix for end
> user no? Something by default should solve this matter otherwise this is
> not usable distro.
Many people are happily using it, and are quite enthusiastic about it,
so evidently it's "usable". That doesn't imply that it's good for
everyone. Perhaps you would prefer a more traditional distro, or one
that has had more time to mature. If so, that's okay.
Regards,
Mark
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-15 19:56 ` Mark H Weaver
@ 2021-04-16 3:08 ` bo0od
2021-04-21 1:35 ` Maxim Cournoyer
1 sibling, 0 replies; 17+ messages in thread
From: bo0od @ 2021-04-16 3:08 UTC (permalink / raw)
To: Mark H Weaver, Tobias Geerinckx-Rice; +Cc: 47717
> Many people are happily using it, and are quite enthusiastic about it,
> so evidently it's "usable". That doesn't imply that it's good for
> everyone. Perhaps you would prefer a more traditional distro, or one
> that has had more time to mature. If so, that's okay.
I can say that on almost any dying distro like slackware or so. But we
need to overcome the issues which are leading to dead projects/distros.
The above issue is one of them if left without solution.
Mark H Weaver:
> bo0od <bo0od@riseup.net> writes:
>
>> > I mean the ‘outrageously’ part. When Linux runs out of memory, it
>> > freezes up. Moral judgment is futile. Better to adopt raingloom's
>> > earlyoom suggestion or similar.
>>
>> Im using default guix system nothing special, If this package usable to
>> solve these stuff i suggest then to include it by default.
>
> 'earlyoom' behavior is not necessarily desirable. I, for one, have a
> fairly old computer by today's standards, and sometimes I ask it to do
> intensive things that are at the edge of its capabilities, such as
> compiling GNU IceCat. An aggressive 'earlyoom' might prematurely abort
> jobs that could have completed, and thereby make it impossible for me to
> continue using this old computer for development.
>
> With that in mind, it's far from clear that 'earlyoom' should be our
> default behavior. It's good to have it as an option, though.
>
>> > 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’
>> > software, especially in parallel (so not using --cores=1 --max-jobs=1)
>> > to make use of those expensive cores.
>> >
>> > I'm disgusted too.
>>
>> Yes it is, But you know this cant be a way of life with guix for end
>> user no? Something by default should solve this matter otherwise this is
>> not usable distro.
>
> Many people are happily using it, and are quite enthusiastic about it,
> so evidently it's "usable". That doesn't imply that it's good for
> everyone. Perhaps you would prefer a more traditional distro, or one
> that has had more time to mature. If so, that's okay.
>
> Regards,
> Mark
>
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-15 19:56 ` Mark H Weaver
2021-04-16 3:08 ` bo0od
@ 2021-04-21 1:35 ` Maxim Cournoyer
2021-04-22 18:34 ` Mark H Weaver
1 sibling, 1 reply; 17+ messages in thread
From: Maxim Cournoyer @ 2021-04-21 1:35 UTC (permalink / raw)
To: Mark H Weaver; +Cc: bo0od, 47717
Hi,
Mark H Weaver <mhw@netris.org> writes:
> bo0od <bo0od@riseup.net> writes:
>
>> > I mean the ‘outrageously’ part. When Linux runs out of memory, it
>> > freezes up. Moral judgment is futile. Better to adopt raingloom's
>> > earlyoom suggestion or similar.
>>
>> Im using default guix system nothing special, If this package usable to
>> solve these stuff i suggest then to include it by default.
>
> 'earlyoom' behavior is not necessarily desirable. I, for one, have a
> fairly old computer by today's standards, and sometimes I ask it to do
> intensive things that are at the edge of its capabilities, such as
> compiling GNU IceCat. An aggressive 'earlyoom' might prematurely abort
> jobs that could have completed, and thereby make it impossible for me to
> continue using this old computer for development.
>
> With that in mind, it's far from clear that 'earlyoom' should be our
> default behavior. It's good to have it as an option, though.
Earlyoom's default config is to only kills processes when both the
physical memory *and* the swap have been used by more than 90%; in such
as serious resource depletion situation, that usually mean having to
hard reset the machine, or waiting one night not knowing if it'll be
done doing whatever it's doing the next morning (probably getting OOM'd
anyway by the kernel, Linux).
>> > 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’
>> > software, especially in parallel (so not using --cores=1 --max-jobs=1)
>> > to make use of those expensive cores.
>> >
>> > I'm disgusted too.
>>
>> Yes it is, But you know this cant be a way of life with guix for end
>> user no? Something by default should solve this matter otherwise this is
>> not usable distro.
>
> Many people are happily using it, and are quite enthusiastic about it,
> so evidently it's "usable". That doesn't imply that it's good for
> everyone. Perhaps you would prefer a more traditional distro, or one
> that has had more time to mature. If so, that's okay.
My 2 cents here is that earlyoom makes Guix System more usable on dated
hardware than Linux's default OOM behavior; from my experience of using
it on a 4 GiB RAM 2010-era laptop for a good while.
I personally would see it a good option for our users to have it on by
default *if* we could manage to connect Earlyoom's notification system
with the desktop (via D-Bus, I think it supports that), so that when a
process is killed, the users has some feedback about it (the stock Linux
OOMK is sure to not let you wondering what's going on -- everything
stops to a crawl, and your hard drive gets thrashed).
Maxim
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-21 1:35 ` Maxim Cournoyer
@ 2021-04-22 18:34 ` Mark H Weaver
2021-04-25 8:14 ` Efraim Flashner
0 siblings, 1 reply; 17+ messages in thread
From: Mark H Weaver @ 2021-04-22 18:34 UTC (permalink / raw)
To: Maxim Cournoyer; +Cc: bo0od, 47717
Hi Maxim,
Maxim Cournoyer <maxim.cournoyer@gmail.com> writes:
> Mark H Weaver <mhw@netris.org> writes:
>
>> 'earlyoom' behavior is not necessarily desirable. I, for one, have a
>> fairly old computer by today's standards, and sometimes I ask it to do
>> intensive things that are at the edge of its capabilities, such as
>> compiling GNU IceCat. An aggressive 'earlyoom' might prematurely abort
>> jobs that could have completed, and thereby make it impossible for me to
>> continue using this old computer for development.
>>
>> With that in mind, it's far from clear that 'earlyoom' should be our
>> default behavior. It's good to have it as an option, though.
>
> Earlyoom's default config is to only kills processes when both the
> physical memory *and* the swap have been used by more than 90%; in such
> as serious resource depletion situation, that usually mean having to
> hard reset the machine, or waiting one night not knowing if it'll be
> done doing whatever it's doing the next morning (probably getting OOM'd
> anyway by the kernel, Linux).
[...]
> My 2 cents here is that earlyoom makes Guix System more usable on dated
> hardware than Linux's default OOM behavior; from my experience of using
> it on a 4 GiB RAM 2010-era laptop for a good while.
Okay, I trust your judgment on this. I haven't tried 'earlyoom' myself.
Moreover, my use case is very unusual, and so it doesn't make sense to
choose a default behavior based on my needs.
So, I've changed my mind. Thanks for talking me through it.
> I personally would see it a good option for our users to have it on by
> default *if* we could manage to connect Earlyoom's notification system
> with the desktop (via D-Bus, I think it supports that), so that when a
> process is killed, the users has some feedback about it (the stock Linux
> OOMK is sure to not let you wondering what's going on -- everything
> stops to a crawl, and your hard drive gets thrashed).
That sounds excellent, if it can be done. Otherwise, it might still
make sense to have 'earlyoom' on by default in Guix. I'll leave it to
others to decide.
Thanks,
Mark
--
Support Richard Stallman against the vicious misinformation campaign
against him and the FSF. See <https://stallmansupport.org> for more.
^ permalink raw reply [flat|nested] 17+ messages in thread
* bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
2021-04-22 18:34 ` Mark H Weaver
@ 2021-04-25 8:14 ` Efraim Flashner
0 siblings, 0 replies; 17+ messages in thread
From: Efraim Flashner @ 2021-04-25 8:14 UTC (permalink / raw)
To: Mark H Weaver; +Cc: bo0od, Maxim Cournoyer, 47717
[-- Attachment #1: Type: text/plain, Size: 2875 bytes --]
On Thu, Apr 22, 2021 at 02:34:22PM -0400, Mark H Weaver wrote:
> Hi Maxim,
>
> Maxim Cournoyer <maxim.cournoyer@gmail.com> writes:
>
> > Mark H Weaver <mhw@netris.org> writes:
> >
> >> 'earlyoom' behavior is not necessarily desirable. I, for one, have a
> >> fairly old computer by today's standards, and sometimes I ask it to do
> >> intensive things that are at the edge of its capabilities, such as
> >> compiling GNU IceCat. An aggressive 'earlyoom' might prematurely abort
> >> jobs that could have completed, and thereby make it impossible for me to
> >> continue using this old computer for development.
> >>
> >> With that in mind, it's far from clear that 'earlyoom' should be our
> >> default behavior. It's good to have it as an option, though.
> >
> > Earlyoom's default config is to only kills processes when both the
> > physical memory *and* the swap have been used by more than 90%; in such
> > as serious resource depletion situation, that usually mean having to
> > hard reset the machine, or waiting one night not knowing if it'll be
> > done doing whatever it's doing the next morning (probably getting OOM'd
> > anyway by the kernel, Linux).
> [...]
> > My 2 cents here is that earlyoom makes Guix System more usable on dated
> > hardware than Linux's default OOM behavior; from my experience of using
> > it on a 4 GiB RAM 2010-era laptop for a good while.
>
> Okay, I trust your judgment on this. I haven't tried 'earlyoom' myself.
> Moreover, my use case is very unusual, and so it doesn't make sense to
> choose a default behavior based on my needs.
>
> So, I've changed my mind. Thanks for talking me through it.
>
> > I personally would see it a good option for our users to have it on by
> > default *if* we could manage to connect Earlyoom's notification system
> > with the desktop (via D-Bus, I think it supports that), so that when a
> > process is killed, the users has some feedback about it (the stock Linux
> > OOMK is sure to not let you wondering what's going on -- everything
> > stops to a crawl, and your hard drive gets thrashed).
>
> That sounds excellent, if it can be done. Otherwise, it might still
> make sense to have 'earlyoom' on by default in Guix. I'll leave it to
> others to decide.
>
> Thanks,
> Mark
FWIW I setup OOM so that it would specifically kill build processes or
icecat but not my desktop.
(service earlyoom-service-type
(earlyoom-configuration
(prefer-regexp "(cc1(plus)?|.rustc-real|ghc|Web Content)")
(avoid-regexp "enlightenment")))
--
Efraim Flashner <efraim@flashner.co.il> אפרים פלשנר
GPG key = A28B F40C 3E55 1372 662D 14F7 41AA E7DC CA3D 8351
Confidentiality cannot be guaranteed on emails sent or received unencrypted
[-- Attachment #2: signature.asc --]
[-- Type: application/pgp-signature, Size: 833 bytes --]
^ permalink raw reply [flat|nested] 17+ messages in thread
end of thread, other threads:[~2021-04-25 8:15 UTC | newest]
Thread overview: 17+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2021-04-12 5:39 bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure bo0od
2021-04-12 18:04 ` bug#47717: guix becomes unresponsive while building the 'vigra' package Leo Famulari
2021-04-13 11:03 ` bo0od
2021-04-13 17:35 ` Leo Famulari
2021-04-14 16:06 ` bo0od
2021-04-14 8:21 ` Mark H Weaver
2021-04-14 17:08 ` bo0od
2021-04-12 18:41 ` bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure Tobias Geerinckx-Rice via Bug reports for GNU Guix
2021-04-12 22:59 ` raingloom
2021-04-13 11:34 ` bo0od
2021-04-14 0:40 ` Tobias Geerinckx-Rice via Bug reports for GNU Guix
2021-04-14 16:54 ` bo0od
2021-04-15 19:56 ` Mark H Weaver
2021-04-16 3:08 ` bo0od
2021-04-21 1:35 ` Maxim Cournoyer
2021-04-22 18:34 ` Mark H Weaver
2021-04-25 8:14 ` Efraim Flashner
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