From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp10.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms5.migadu.com with LMTPS id IM+UA4GY52P7rAAAbAwnHQ (envelope-from ) for ; Sat, 11 Feb 2023 14:30:41 +0100 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp10.migadu.com with LMTPS id KNmmAoGY52PdAgAAG6o9tA (envelope-from ) for ; Sat, 11 Feb 2023 14:30:41 +0100 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 727F1CE3D for ; Sat, 11 Feb 2023 14:30:40 +0100 (CET) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1pQpxW-000592-QN; Sat, 11 Feb 2023 08:30:32 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1pP5cx-0000nC-2D for bug-guix@gnu.org; Mon, 06 Feb 2023 12:50:03 -0500 Received: from debbugs.gnu.org ([209.51.188.43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1pP5cw-0001IY-Gx for bug-guix@gnu.org; Mon, 06 Feb 2023 12:50:02 -0500 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1pP5cw-0007eu-9x for bug-guix@gnu.org; Mon, 06 Feb 2023 12:50:02 -0500 X-Loop: help-debbugs@gnu.org Subject: bug#61329: Info Resent-From: Michela Francesconi Original-Sender: "Debbugs-submit" Resent-CC: bug-guix@gnu.org Resent-Date: Mon, 06 Feb 2023 17:50:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 61329 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 61329@debbugs.gnu.org X-Debbugs-Original-To: bug-guix@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.167570579329415 (code B ref -1); Mon, 06 Feb 2023 17:50:02 +0000 Received: (at submit) by debbugs.gnu.org; 6 Feb 2023 17:49:53 +0000 Received: from localhost ([127.0.0.1]:49826 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pP5cn-0007eN-4C for submit@debbugs.gnu.org; Mon, 06 Feb 2023 12:49:53 -0500 Received: from lists.gnu.org ([209.51.188.17]:55030) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pP1fw-0007t9-0C for submit@debbugs.gnu.org; Mon, 06 Feb 2023 08:36:52 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1pP1fo-0000J7-Rf for bug-guix@gnu.org; Mon, 06 Feb 2023 08:36:47 -0500 Received: from mail-pl1-x629.google.com ([2607:f8b0:4864:20::629]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1pP1fm-00055P-NZ for bug-guix@gnu.org; Mon, 06 Feb 2023 08:36:44 -0500 Received: by mail-pl1-x629.google.com with SMTP id r8so12127888pls.2 for ; Mon, 06 Feb 2023 05:36:41 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20210112; h=to:subject:message-id:date:from:mime-version:from:to:cc:subject :date:message-id:reply-to; bh=Zg13dQiy5V1iX8SQkSbURKvS9a7LdOqL5UCEmB+nmfo=; b=Bhkxc27TsZX3tL/gEMrzKlCl75IIOc+I63PLxffX1SqBqp7JXX5UmiEAFaJzWEKxZV OjO3LTyH/6CJLK2Ln0wdzuqV5LR6/AcYtUVKMbm0bSyMZHFZxoIhEfnCI6Vwo9OwbfGV 7TlLiPqZ+P4m/+VMV2nL8C2t5WenhMRZ91RHpFiq/cRVb+v3c/pf+U2rGOI8VVWwwqo5 W7UI6Qv3i11D3iuqnVLjMmSlkSnb1YmfD7N8kqjhKVprdrlGmC9OWoddNJKeKsH6VVoN /vk6Ir7u6xYwVCi4VD2dvsfXf1GWKPnTCBeVnCc5u7LGSaKvneVkJyaFOzJ1lwAM041z euAA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; h=to:subject:message-id:date:from:mime-version:x-gm-message-state :from:to:cc:subject:date:message-id:reply-to; bh=Zg13dQiy5V1iX8SQkSbURKvS9a7LdOqL5UCEmB+nmfo=; b=ZbrAKFZYxjlt4rMPPcdqDT4/xPEFQshNL4O0PCbxvD0WK2EmPyATv7clst4LgSktgN khgJHtTAAsXi6QIF4f1IccYjRVo4UCoLoAgvbeeYW8myAJS2JLuQbcFN/2lha3aEAMt1 Lnp6PyiPsGedIl2IU8n8XE7X/sVC5YAh6xzk5xPuNqZ+mBL0yBdJD4QqzVoU7mLC5pu+ SYch6JV9Etw5f1pzYJEUG/6WT3Yv8jutuntkuZ5NsIfGOZMMzZE9QHLjDzNzU9WgKIjd zE3YHK5ij1OY4y8kuQY29/nAQ3yPDldPApd0CwgTyotX10iiwoAeKL71xNAzmR1zWUGQ en5w== X-Gm-Message-State: AO0yUKXraURi7aRTIZK7AciodKYVHodgdkySgzPnk9i+DKYoorZKDaIH OxgTu3aEFgGDPVhLEen/bc6rW6FceD9eHS9XOoRTYd5J4nNLa1HG X-Google-Smtp-Source: AK7set+3UDVvnWkp9ScNV8/B7ttwPj13Xc2n2zak7nf1srl6p9QEuJMxK4JqU30n7Hlq1UiyenLyrpYuGtbukUDXNTI= X-Received: by 2002:a17:90a:187:b0:22c:ad5e:e1e3 with SMTP id 7-20020a17090a018700b0022cad5ee1e3mr3300994pjc.141.1675690600312; Mon, 06 Feb 2023 05:36:40 -0800 (PST) MIME-Version: 1.0 From: Michela Francesconi Date: Mon, 6 Feb 2023 14:36:30 +0100 Message-ID: Content-Type: multipart/alternative; boundary="000000000000fc340905f4081e83" Received-SPF: pass client-ip=2607:f8b0:4864:20::629; envelope-from=michelafrancesconi8@gmail.com; helo=mail-pl1-x629.google.com X-Spam_score_int: -17 X-Spam_score: -1.8 X-Spam_bar: - X-Spam_report: (-1.8 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_ENVFROM_END_DIGIT=0.25, FREEMAIL_FROM=0.001, HTML_MESSAGE=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Mailman-Approved-At: Mon, 06 Feb 2023 12:49:51 -0500 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Mailman-Approved-At: Sat, 11 Feb 2023 08:30:20 -0500 X-BeenThere: bug-guix@gnu.org List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: bug-guix-bounces+larch=yhetil.org@gnu.org Sender: bug-guix-bounces+larch=yhetil.org@gnu.org X-Migadu-Country: US X-Migadu-Flow: FLOW_IN ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=Bhkxc27T; spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none) ARC-Seal: i=1; s=key1; d=yhetil.org; t=1676122240; a=rsa-sha256; cv=none; b=jN+bQ0XSNJ7a/4V7CUkFxwzGq8cIowpDEmceyiQss3Ixs50bjho6IScOSwb7ciX2GXUjqp nBeFQT4Wi8U4OpZf4VGdAz2n6XZrL0V6BHDY/XgI+PJfv9v3CtfYpg89+Jid8r/pA9L5rW vOK6phzh+QxZraUJl3YaJmMNeYIw679fvpCbz9jUQxwDJkso5uvzQ1mB11fM25u6Q+aDZr Rc1Vol86heDxdC03MmwNK8GMrLbBFp2FFlA+lIQ+0t8wluq+kq2fU86baQbTlnbJoqyJ0V ejbCt7Y9T5zKIn2D9bpEty051qu1EUv8FBTtNYawfGANzltBBofu0w0nqrtvFg== ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1676122240; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:mime-version:mime-version: content-type:content-type:resent-cc:resent-from:resent-sender: resent-message-id:list-id:list-help:list-unsubscribe:list-subscribe: list-post:dkim-signature; bh=Zg13dQiy5V1iX8SQkSbURKvS9a7LdOqL5UCEmB+nmfo=; b=It+iIT8XRd85oNPzc33hiB5cDCgcfubDV/GmKSGQOrP3UnYUwG2eHYBNhA8+CdXFNUikAY 2jGlgQu0aj0eT1qVEkCh7Sorev8OTTCpQDDlriTYjh5Ehk1VZHqnvwQcxPdSq7V75d8/bd 2fXCYM5H3zWMFE7bLnPbOvDi+Su9Zd6O1DxLAshzreHWAmEKcKSKsbq3MG/MXQTW38S1S1 naOfRWs4Y8xfdc+EZtRbdzOKm1tUOpQdv8ls4zjCKCugox4GzsHraOWjfvR53srGgKjOqz gFp6YqFAPWMSgYymaFYq+05f75AfQm7CAK0fee/5euDbjloK6THo6T5uNTSTHw== X-Migadu-Queue-Id: 727F1CE3D Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=Bhkxc27T; spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none) X-Migadu-Scanner: scn0.migadu.com X-Migadu-Spam-Score: -1.81 X-Spam-Score: -1.81 X-TUID: baD0TQZqQdzd --000000000000fc340905f4081e83 Content-Type: text/plain; charset="UTF-8" Hello, I am using an ssh account that connects to an external server, i have downloaded through guix some software like samtools and bedtools but when i try to use them in my directory it gives me this error: -bash: samtools: command not found In my direcory, however, there is the directry guix.profile and if I go into the bin folder of this, I have everything I downloaded and if I run: ./samtools In that direcory, I can see it and works. But how I can use that software packages in another folder? I try with: PATH=$PATH:~/home/hub_galli/mfrancesconi/.guix-profile/bin export PATH But it doesn't work. What I'm doing wrong? You can help me? Thank you and best regards Michela --000000000000fc340905f4081e83 Content-Type: text/html; charset="UTF-8" Content-Transfer-Encoding: quoted-printable

Hello,=C2=A0

I am using an ssh account that connects to an external server, i= have downloaded through guix some software like samtools and bedtools but = when i try to use them in my directory it gives me this error:

-bash: samtools: command not found

In my direcory, = however, there is the directry guix.profile and if I go into the bin folder= of this, I have everything I downloaded and if I run:

./samtools

In that direcory, I can see it and works. But ho= w I can use that software packages in another folder? I try with:

PATH=3D$PATH:~/home/hub_galli/mfrancesconi/.gui= x-profile/bin =20 export PATH

But it doesn't work. What I'= m doing wrong? You can help me?


Thank you and best regards

Michela

--000000000000fc340905f4081e83--