From: zimoun <zimon.toutoune@gmail.com>
To: Arun Isaac <arunisaac@systemreboot.net>
Cc: 39204@debbugs.gnu.org
Subject: bug#39204: r-rgdal: Reading of vector GIS data causes segfault
Date: Fri, 21 Feb 2020 19:53:22 +0100 [thread overview]
Message-ID: <CAJ3okZ2D3Us4p3hKMZBrnFbwJRrSpZkHkX_OZY_3Yhb_9pwn-w@mail.gmail.com> (raw)
In-Reply-To: <cu7tv3lrxpq.fsf@systemreboot.net>
Hi Arun,
On Thu, 20 Feb 2020 at 18:11, Arun Isaac <arunisaac@systemreboot.net> wrote:
> > 2. a regression of r-rgdal introduced by your commit
> > f9d328833fc1f5d0fb76b61b12d1a3cb013932e6
>
> Replacing proj.4 with proj in the r-rgdal package seems to fix this
> regression. Can you confirm?
You mean:
guix build --with-input=proj.4=proj r-rgdal
then it compiles a lot... and I do not understand why gdal is
recompiled. Anyway!
So after some CPU burning, I get:
--8<---------------cut here---------------start------------->8---
Testing examples for package ‘rgdal’
Running specific tests for package ‘rgdal’
Running ‘srs_rendering.R’
comparing ‘srs_rendering.Rout’ to ‘srs_rendering.Rout.save’ ...
5c5
< [1] "Rel. 6.2.0, September 1st, 2019, [PJ_VERSION: 620]"
---
> [1] "Rel. 6.0.0, March 1st, 2019, [PJ_VERSION: 600]"
7c7
< [1] "GDAL 3.0.2, released 2019/10/28"
---
> [1] "GDAL 2.4.0, released 2018/12/14"
11c11
<
scot_BNG
---
> trin_inca_pl03
12c12
< "+proj=tmerc +lat_0=49 +lon_0=-2 +k=0.9996012717 +x_0=400000
+y_0=-100000 +ellps=airy +units=m +no_defs"
---
> NA
13c13
<
trin_inca_pl03
---
> kiritimati_primary_roads
14c14
<
NA
---
> "+proj=utm +zone=4 +datum=WGS84 +units=m +no_defs "
16c16
<
"+proj=longlat +datum=WGS84 +no_defs"
---
<
kiritimati_primary_roads
---
> scot_BNG
18c18
< "+proj=utm
+zone=4 +datum=WGS84 +units=m +no_defs"
---
> "+proj=tmerc +lat_0=49 +lon_0=-2 +k=0.9996012717 +x_0=400000 +y_0=-100000 +ellps=airy +towgs84=446.448,-125.157,542.06,0.15,0.247,0.842,-20.489 +units=m +no_defs "
22c22
< [1] "+proj=longlat +a=6378137.01 +rf=298.257223563
+towgs84=0,0,0,0,0,0,0 +no_defs"
---
> [1] "+proj=longlat +ellps=WGS84 +towgs84=0,0,0,0,0,0,0 +no_defs "
24c24
< [1] "+proj=utm +zone=23 +south +ellps=aust_SA
+towgs84=-57,1,-41,0,0,0,0 +units=m +no_defs"
---
> [1] "+proj=utm +zone=23 +south +ellps=aust_SA +towgs84=-57,1,-41,0,0,0,0 +units=m +no_defs "
26c26
< [1] "+proj=longlat +datum=WGS84 +no_defs"
---
> [1] "+proj=longlat +datum=WGS84 +no_defs "
28c28
< [1] "+proj=lcc +lat_1=46.8 +lat_0=46.8 +lon_0=0
+k_0=0.999877420000019 +x_0=600000 +y_0=2200000.00000032
+ellps=clrk80ign +pm=paris +towgs84=-168,-60,320,0,0,0,0 +units=m
+no_defs"
---
> [1] "+proj=lcc +lat_1=46.8 +lat_0=46.8 +lon_0=0 +k_0=0.9998774200000193 +x_0=600000 +y_0=2200000.000000325 +a=6378249.2 +b=6356515.000000472 +towgs84=-168,-60,320,0,0,0,0 +pm=paris +units=m +no_defs "
40c40
< file: SP27GTIF.TIF , SRS: +proj=tmerc +lat_0=36.6666666666667
+lon_0=-88.3333333333333 +k=0.999975 +x_0=152400.30480061 +y_0=0
+ellps=clrk66 +towgs84=-8,160,176,0,0,0,0 +units=us-ft +no_defs
---
> file: SP27GTIF.TIF , SRS: +proj=tmerc +lat_0=36.66666666666666 +lon_0=-88.33333333333333 +k=0.9999749999999999 +x_0=152400.3048006096 +y_0=0 +datum=NAD27 +units=us-ft +no_defs
41c41
< file: cea.tif , SRS: +proj=cea +lat_ts=33.75
+lon_0=-117.333333333333 +x_0=0 +y_0=0 +datum=NAD27 +units=m +no_defs
---
> file: cea.tif , SRS: +proj=cea +lon_0=-117.333333333333 +lat_ts=33.75 +x_0=0 +y_0=0 +datum=NAD27 +units=m +no_defs
42c42
< file: erdas_spnad83.tif , SRS: +proj=tmerc +lat_0=30
+lon_0=-82.1666666666667 +k=0.9999 +x_0=200000 +y_0=0 +ellps=GRS80
+towgs84=0,0,0,0,0,0,0 +units=us-ft +no_defs
---
> file: erdas_spnad83.tif , SRS: +proj=tmerc +lat_0=30 +lon_0=-82.16666666666667 +k=0.9999 +x_0=200000 +y_0=0 +ellps=GRS80 +towgs84=0,0,0,0,0,0,0 +units=us-ft +no_defs
43c43
< file: scaleoffset.vrt , SRS: +proj=utm +zone=18 +ellps=WGS84
+towgs84=0,0,0,0,0,0,0 +units=m +no_defs
---
> file: scaleoffset.vrt , SRS: +proj=utm +zone=18 +datum=WGS84 +units=m +no_defs
Running ‘test_proj.R’
comparing ‘test_proj.Rout’ to ‘test_proj.Rout.save’ ... OK
Running ‘tests.R’
comparing ‘tests.Rout’ to ‘tests.Rout.save’ ... OK
Running ‘tripup.R’
comparing ‘tripup.Rout’ to ‘tripup.Rout.save’ ...
266c266
< coords FALSE
---
> coords TRUE
267c267
< holes FALSE
---
> holes TRUE
273c273
< coords FALSE
---
> coords TRUE
274c274
< holes FALSE
---
> holes TRUE
Running vignettes for package ‘rgdal’
Running ‘OGR_shape_encoding.Rnw’
phase `check' succeeded after 18.7 seconds
--8<---------------cut here---------------end--------------->8---
Therefore, I do not confirm, I guess.
All the best,
simon
next prev parent reply other threads:[~2020-02-21 18:54 UTC|newest]
Thread overview: 20+ messages / expand[flat|nested] mbox.gz Atom feed top
2020-01-20 15:43 bug#39204: r-rgdal: Reading of vector GIS data causes segfault Wiktor Żelazny
2020-01-20 19:50 ` zimoun
2020-02-20 10:35 ` zimoun
2020-02-20 17:10 ` Arun Isaac
2020-02-21 11:19 ` zimoun
2020-02-21 12:12 ` Arun Isaac
2020-02-21 12:30 ` zimoun
2020-02-21 18:54 ` zimoun
2020-02-21 21:35 ` Arun Isaac
2020-02-21 22:14 ` zimoun
2020-02-21 18:53 ` zimoun [this message]
2020-02-21 21:40 ` Arun Isaac
2020-02-21 22:19 ` zimoun
2020-02-22 19:42 ` Arun Isaac
2020-02-24 11:33 ` zimoun
2020-02-24 19:09 ` Arun Isaac
2020-02-25 15:49 ` zimoun
2020-10-12 10:22 ` Arun Isaac
2020-10-12 16:23 ` Wiktor Żelazny
2020-10-13 4:21 ` Arun Isaac
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
List information: https://guix.gnu.org/
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to=CAJ3okZ2D3Us4p3hKMZBrnFbwJRrSpZkHkX_OZY_3Yhb_9pwn-w@mail.gmail.com \
--to=zimon.toutoune@gmail.com \
--cc=39204@debbugs.gnu.org \
--cc=arunisaac@systemreboot.net \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
Code repositories for project(s) associated with this public inbox
https://git.savannah.gnu.org/cgit/guix.git
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).