unofficial mirror of bug-guix@gnu.org 
 help / color / mirror / code / Atom feed
From: zimoun <zimon.toutoune@gmail.com>
To: wz@freeshell.de
Cc: 39204@debbugs.gnu.org
Subject: bug#39204: r-rgdal: Reading of vector GIS data causes segfault
Date: Mon, 20 Jan 2020 20:50:25 +0100	[thread overview]
Message-ID: <CAJ3okZ2=gYbTTHoYtn=d+mJjorzqYgHYZGwdF=4KrG2_zSJBvg@mail.gmail.com> (raw)
In-Reply-To: <20200120154302.ijni47ou4fk4wd77@wzguix>

Hi,

Thank you for reporting.


The issue is that the error is not catched at build time. It is not
expected. This package should fail and not say "successfully built".

Well, this needs more investigation.


--8<---------------cut here---------------start------------->8---
$ guix build r-rgdal --check --no-grafts -K
[...]
phase `install' succeeded after 19.0 seconds
starting phase `check'
Testing examples for package ‘rgdal’
/gnu/store/dnb6fzp5295fcda66dnjk2y51mcva20f-r-minimal-3.6.2/lib/R/bin/BATCH:
line 60:   598 Segmentation fault      ${R_HOME}/bin/R -f ${in}
${opts} ${R_BATCH_OPTIONS} > ${out} 2>&1
[...]
successfully built /gnu/store/7spmagnk5fycwxsigdypwkmk4kazbw7a-r-rgdal-1.4-8.drv
note: keeping build directory `/tmp/guix-build-r-rgdal-1.4-8.drv-0'
/gnu/store/dgkyzlasbqsxcsfk3n3bgmhrpg447f55-r-rgdal-1.4-8
--8<---------------cut here---------------end--------------->8---

Good catch! :-)


All the best,
simon

--

$ guix describe
Generation 68   Jan 16 2020 15:57:09    (current)
  guix d14e474
    repository URL: https://git.savannah.gnu.org/git/guix.git
    branch: master
    commit: d14e4745b36a835c6babd5b5f5562e12294cd9cf

  reply	other threads:[~2020-01-20 19:51 UTC|newest]

Thread overview: 20+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2020-01-20 15:43 bug#39204: r-rgdal: Reading of vector GIS data causes segfault Wiktor Żelazny
2020-01-20 19:50 ` zimoun [this message]
2020-02-20 10:35   ` zimoun
2020-02-20 17:10     ` Arun Isaac
2020-02-21 11:19       ` zimoun
2020-02-21 12:12         ` Arun Isaac
2020-02-21 12:30           ` zimoun
2020-02-21 18:54           ` zimoun
2020-02-21 21:35             ` Arun Isaac
2020-02-21 22:14               ` zimoun
2020-02-21 18:53       ` zimoun
2020-02-21 21:40         ` Arun Isaac
2020-02-21 22:19           ` zimoun
2020-02-22 19:42             ` Arun Isaac
2020-02-24 11:33               ` zimoun
2020-02-24 19:09                 ` Arun Isaac
2020-02-25 15:49                   ` zimoun
2020-10-12 10:22                     ` Arun Isaac
2020-10-12 16:23                       ` Wiktor Żelazny
2020-10-13  4:21                         ` Arun Isaac

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

  List information: https://guix.gnu.org/

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to='CAJ3okZ2=gYbTTHoYtn=d+mJjorzqYgHYZGwdF=4KrG2_zSJBvg@mail.gmail.com' \
    --to=zimon.toutoune@gmail.com \
    --cc=39204@debbugs.gnu.org \
    --cc=wz@freeshell.de \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/guix.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).