From mboxrd@z Thu Jan 1 00:00:00 1970 From: zimoun Subject: bug#39204: r-rgdal: Reading of vector GIS data causes segfault Date: Mon, 24 Feb 2020 12:33:11 +0100 Message-ID: References: <20200120154302.ijni47ou4fk4wd77@wzguix> Mime-Version: 1.0 Content-Type: text/plain; charset="UTF-8" Return-path: Received: from eggs.gnu.org ([2001:470:142:3::10]:52574) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1j6Bzw-000597-6u for bug-guix@gnu.org; Mon, 24 Feb 2020 06:34:05 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1j6Bzv-0002mK-1T for bug-guix@gnu.org; Mon, 24 Feb 2020 06:34:04 -0500 Received: from debbugs.gnu.org ([209.51.188.43]:46978) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1j6Bzu-0002mD-TB for bug-guix@gnu.org; Mon, 24 Feb 2020 06:34:02 -0500 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1j6Bzt-000363-Q7 for bug-guix@gnu.org; Mon, 24 Feb 2020 06:34:01 -0500 Sender: "Debbugs-submit" Resent-Message-ID: In-Reply-To: List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: bug-guix-bounces+gcggb-bug-guix=m.gmane-mx.org@gnu.org Sender: "bug-Guix" To: Arun Isaac Cc: 39204@debbugs.gnu.org Hi Arun, First, your patch does not apply. Because it should be line 21 and not 18 for the addition of your Copyright. On Sat, 22 Feb 2020 at 20:42, Arun Isaac wrote: > $ ./pre-inst-env guix build r-rgdal I get the same message than I previously sent: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=39204#26 > $ ./pre-inst-env guix environment --container --ad-hoc r r-rgdal -- Rscript -e 'library(rgdal); dsn <- system.file("vectors", package = "rgdal")[1]; ogrInfo(dsn=dsn, layer="cities")' --8<---------------cut here---------------start------------->8--- Loading required package: sp rgdal: version: 1.4-8, (SVN revision 845) Geospatial Data Abstraction Library extensions to R successfully loaded Loaded GDAL runtime: GDAL 3.0.2, released 2019/10/28 Path to GDAL shared files: GDAL binary built with GEOS: TRUE Loaded PROJ.4 runtime: Rel. 6.2.0, September 1st, 2019, [PJ_VERSION: 620] Path to PROJ.4 shared files: (autodetected) Linking to sp version: 1.4-0 Source: "/gnu/store/m4rd975j3979zqqqfwg3b7s070i3n3h3-r-rgdal-1.4-8/site-library/rgdal/vectors", layer: "cities" Driver: ESRI Shapefile; number of rows: 606 Feature type: wkbPoint with 2 dimensions Extent: (-165.27 -53.15) - (177.1302 78.2) CRS: +proj=longlat +datum=WGS84 +no_defs LDID: 0 Number of fields: 4 name type length typeName 1 NAME 4 40 String 2 COUNTRY 4 12 String 3 POPULATION 12 11 Integer64 4 CAPITAL 4 1 String --8<---------------cut here---------------end--------------->8--- But as we have talked before, there is an issue about the upstream test suite of the package (point 1. of [1]). So I am investigating... [1] https://debbugs.gnu.org/cgi/bugreport.cgi?bug=39204#26 All the best, simon