From: Cayetano Santos via Bug reports for GNU Guix <bug-guix@gnu.org>
To: 61967@debbugs.gnu.org
Subject: bug#61967: guix pack error with python packages
Date: Sat, 04 Mar 2023 20:35:01 +0100 [thread overview]
Message-ID: <87y1occn5t.fsf@inventati.org> (raw)
Hello guix,
I’m trying to deploy a test set of python packages to a remote server,
using the following guix pack command (latest guix, as for now)
guix pack -R --compression=xz --save-provenance \
-S /.guix-profile/bin=bin -S /.guix-profile/share=share \
-S /.guix-profile/etc=etc -S /.guix-profile/lib=lib \
-S /.guix-profile/include=include
The resulting file.tar.xz is sent to the server with
scp file.tar.xz server:/dir1/dir2/.
Then, when I
ssh server
cd /dir1/dir2
I do a
tar xf file.tar.xz
At this point, a ’ls /dir1/dir2’ shows, as expected
.guix-profile
gnu
file.tar.xz
Now, when I just (PYTHONPATH is empty at this point)
/dir1/dir2/.guix-profile/bin/python3 -c \
"import sys; print(sys.path)"
I get
/dir1/dir2/hj...python...
/dir1/dir2/hj...numpy...
/dir1/dir2/hj...matplotlib...
instead of
/dir1/dir2/gnu/store/hj...python...
/dir1/dir2/gnu/store/hj...numpy...
/dir1/dir2/gnu/store/hj...matplotlib...
so that when I
/dir1/dir2/.guix-profile/bin/python3 -c "import numpyt"
I get an error
ModuleNotFoundError: No module named 'numpy'
If, however, I
export GUIX_PROFILE=/dir1/dir2/.guix-profile
source $GUIX_PROFILE/etc/profile
export PYTHONPATH=$GUIX_PYTHONPATH
and then
/dir1/dir2/.guix-profile/bin/python3
I have
Error processing line 1 of
/dir1/dir2/.guix-profile/lib/python3.9/site-packages/matplotlib-3.5.2-py3.9-nspkg.pth:
Trying to ’import numpy’ gives
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/dir1/dir2/.guix-profile/lib/python3.9/site-packages/numpy/__init__.py", line 110, in <module>
import warnings
ModuleNotFoundError: No module named 'warnings'
Am I doing something wrong ? Is this a bug ?
Thanks,
Cayetano Santos
next reply other threads:[~2023-03-04 19:50 UTC|newest]
Thread overview: 8+ messages / expand[flat|nested] mbox.gz Atom feed top
2023-03-04 19:35 Cayetano Santos via Bug reports for GNU Guix [this message]
2023-03-05 10:11 ` bug#61967: guix pack error with python packages Josselin Poiret via Bug reports for GNU Guix
2023-03-07 21:08 ` Maxim Cournoyer
2023-03-09 19:57 ` Josselin Poiret via Bug reports for GNU Guix
2023-03-10 3:43 ` Maxim Cournoyer
2023-03-10 8:10 ` Josselin Poiret via Bug reports for GNU Guix
2023-06-05 19:53 ` bug#61967: (no subject) Cayetano Santos
2023-08-14 8:59 ` bug#61967: Fixed Cayetano Santos via Bug reports for GNU Guix
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