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Wed, 03 Mar 2021 05:30:06 -0800 (PST) From: zimoun References: <865z6v4vuw.fsf@gmail.com> Date: Thu, 25 Feb 2021 16:28:26 +0100 In-Reply-To: <865z6v4vuw.fsf@gmail.com> (zimoun's message of "Tue, 27 Oct 2020 14:55:03 +0100") Message-ID: <87sg5kcgkl.fsf@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.1 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: bug-guix@gnu.org List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: bug-guix-bounces+larch=yhetil.org@gnu.org Sender: "bug-Guix" X-Migadu-Flow: FLOW_IN ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1614778291; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; 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dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20161025 header.b=Ym5iyA5P; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of bug-guix-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=bug-guix-bounces@gnu.org X-Migadu-Queue-Id: 66F8427593 X-Spam-Score: -0.26 X-Migadu-Scanner: scn1.migadu.com X-TUID: pAoe6o7NRLQA Hi, On Tue, 27 Oct 2020 at 14:55, zimoun wrote: > $ guix import cran -a bioconductor CATALYST > > Starting download of /tmp/guix-file.OPtOW1 >>>From https://bioconductor.org/packages/release/bioc/src/contrib/CATALYST_= 1.12.2.tar.gz... > =E2=80=A612.2.tar.gz 10.2MiB 567KiB/s 00:18 [###########= #######] 100.0% > > Starting download of /tmp/guix-file.V6sC1Z >>>From https://bioconductor.org/packages/release/bioc/src/contrib/CATALYST_= 1.12.2.tar.gz... > =E2=80=A612.2.tar.gz 10.2MiB 565KiB/s 00:19 [###########= #######] 100.0% > > I have not investigated more, if the issue is from the importer or from > the information provided by Bioconductor. It comes from =E2=80=99cran->guix-package=E2=80=99 in (guix import cran): --8<---------------cut here---------------start------------->8--- (let ((description (fetch-description repo package-name))) (if description (description->package repo description) --8<---------------cut here---------------end--------------->8--- where =E2=80=99fetch-description=E2=80=99 effectively downloads but then =E2=80=99description->package=E2=80=99 downloads again: --8<---------------cut here---------------start------------->8--- (source (download source-url #:method (cond (git? 'git) (hg? 'hg) (else #f)))) --8<---------------cut here---------------end--------------->8--- This second download is not necessary. The fix needs some care with the different repositories. Cheers, simon