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* bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed"
@ 2018-11-01  2:09 George Clemmer
  2018-11-01  2:35 ` George Clemmer
  2018-11-01  8:45 ` Gábor Boskovits
  0 siblings, 2 replies; 7+ messages in thread
From: George Clemmer @ 2018-11-01  2:09 UTC (permalink / raw)
  To: 33223

[-- Attachment #1: Type: text/plain, Size: 406 bytes --]

In a 'guix system vm-image' VM produced using Guix from Git
v0.15.0-3097-gc16913d34 I have ...

g1@sysi53 ~$ guix --version
guix (GNU Guix) 0.15.0-6.f9a8fce

... and when I try to install a package, e.g., ...

g1@sysi53 ~$ guix package -i emacs-no-x

... I get ...

building /gnu/store/phy1nbsmlml06lkjixjw2dfb4k6wi5al-python-3.6.5.drv...
-Killed

... details and vm-image config, attached.

TIA - George


[-- Attachment #2: python-killed.log --]
[-- Type: application/octet-stream, Size: 8573 bytes --]

glc@g1 ~ [def]$ ssh g1@sysi53.local
Last login: Wed Oct 31 18:53:07 2018 from fe80::1002:76ac:24fd:f1b2%eth0
g1@sysi53 ~$ guix --version
guix (GNU Guix) 0.15.0-6.f9a8fce
Copyright (C) 2018 the Guix authors
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.
g1@sysi53 ~$ guix package -I
g1@sysi53 ~$ guix package -i emacs-no-x
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
building /gnu/store/qqir6r1rnd3ljg1cd583v34klqjqpljb-texinfo-6.5.drv...
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
building /gnu/store/hzbmzfa7dq173c2q8kr1d552pfm73mkz-acl-2.2.52.src.tar.gz.drv...
downloading from http://download.savannah.gnu.org/releases/acl/acl-2.2.52.src.tar.gz...
building /gnu/store/flyy73g1vjwimbpzmlpzjvs5h4js49bq-attr-2.4.47.src.tar.gz.drv...
downloading from http://download.savannah.gnu.org/releases/attr/attr-2.4.47.src.tar.gz...
building /gnu/store/4ycmmxb0g64p45zldlb4kqs5h6wnh5jd-acl-2.2.52.src.tar.xz.drv...
building /gnu/store/0jv0zc1jns1angq6f4nm9awcychmdiq7-emacs-26.1.tar.xz.drv...
downloading from https://ftpmirror.gnu.org/gnu/emacs/emacs-26.1.tar.xz...
building /gnu/store/8zw4szxx1ppnlj4a68d8ya3nn94namb3-gettext-0.19.8.1.tar.xz.drv...
building /gnu/store/8p40qw96661gr6ha43wqkifj0lg3piax-emacs-26.1.tar.xz.drv...
building /gnu/store/baqfr8ry366mxlh0r8hzxz65c4f1d16b-gettext-minimal-0.19.8.1.drv...
|
g1@sysi53 ~$ guix package -i emacs-no-x --max-jobs=10 --cores=6 --fallback
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
building /gnu/store/baqfr8ry366mxlh0r8hzxz65c4f1d16b-gettext-minimal-0.19.8.1.drv...
building /gnu/store/chjhb1ga700mmbaswcxfyv71shd8sh5c-attr-2.4.47.drv...
building /gnu/store/1ilp3j4yp0rqbk92cd8k70mw1g98c6pa-acl-2.2.52.drv...
building /gnu/store/1cz4cfvk6mdsxk11rzq15ngy3lv4lv09-emacs-no-x-26.1.drv...
The following package will be installed:
   emacs-no-x	26.1	/gnu/store/9h9rs9pxv966h0k0r74fng2iydgnmk0y-emacs-no-x-26.1

substitute: updating substitutes from 'http://g1.local:8080'... 100.0%
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: updating substitutes from 'https://berlin.guixsd.org'... 100.0%
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
building /gnu/store/w5q8crva33rjxsav5m82w4l0gix6660j-gzip-1.9.drv...
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
substitute: guix substitute: warning: while fetching 'https://mirror.hydra.gnu.org/nix-cache-info': 504 ("Gateway Time-out")
substitute: guix substitute: warning: ignoring substitute server at '"https://mirror.hydra.gnu.org"'
building /gnu/store/phy1nbsmlml06lkjixjw2dfb4k6wi5al-python-3.6.5.drv...
-Killed
g1@sysi53 ~$ exit
logout
Connection to sysi53.local closed.
glc@g1 ~ [def]$ 

[-- Attachment #3: sysi52.scm --]
[-- Type: application/octet-stream, Size: 1938 bytes --]

;; -*-Scheme-*-
;;; minimal 'guix system vm-image' config ~ sys.scm
(define sys-packages
  '(
    "cups"
    "git"
    "glibc-utf8-locales"
    "mosh"
    "nss-certs"
    "openssh"
    "screen"
    ))
(use-modules (gnu))
(use-modules (gnu packages))
(use-modules (gnu system nss)) ; name service switch
(use-service-modules
 avahi
 networking ; dhcp-client-service
 ssh ; openssh-service-type
 )
(define %my-services
  (modify-services %base-services
    (guix-service-type config =>
		       (guix-configuration
			(inherit config)
			(substitute-urls (list "http://g1.local:8080"
					       "https://mirror.hydra.gnu.org"
					       "https://hydra.gnu.org"
					       "https://berlin.guixsd.org"
					       ))))))
(operating-system
  (host-name "sysi52")
  (timezone "America/New_York")
  (locale "en_US.utf8")
  (bootloader (grub-configuration (target "/dev/sda")))
  (file-systems (cons (file-system
			(device (file-system-label "g1sd"))
			(mount-point "/")
			(type "ext4"))
		      %base-file-systems))
  (users (cons*
	  (user-account
	   (name "g1")
	   (group "users")
	   (supplementary-groups '("wheel"))
	   (home-directory "/home/g1"))
	  (user-account
	   (name "al")
	   (group "users")
	   (supplementary-groups '("wheel"))
	   (home-directory "/home/al"))
	  %base-user-accounts))
  (packages (append (map specification->package sys-packages)
		    %base-packages))
  (services (cons*
	     (dhcp-client-service)
	     (service openssh-service-type
		      (openssh-configuration
		       (x11-forwarding? #t)
		       (permit-root-login #t)
		       (allow-empty-passwords? #t)
		       (authorized-keys
			`(
			  ("g1" ,(local-file "glc.pub"))
			  ("al" ,(local-file "glc.pub"))
			  ("root" ,(local-file "glc.pub"))))))
	     (avahi-service)
	     (ntp-service)
	     (extra-special-file "/etc/gen/sysi52.scm"
				 (local-file "sysi52.scm"))
	     %my-services))
  (name-service-switch %mdns-host-lookup-nss))

^ permalink raw reply	[flat|nested] 7+ messages in thread

* bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed"
  2018-11-01  2:09 bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed" George Clemmer
@ 2018-11-01  2:35 ` George Clemmer
  2018-11-01  8:45 ` Gábor Boskovits
  1 sibling, 0 replies; 7+ messages in thread
From: George Clemmer @ 2018-11-01  2:35 UTC (permalink / raw)
  To: 33223

George Clemmer <myglc2@gmail.com> writes:

> In a 'guix system vm-image' VM produced using Guix from Git
> v0.15.0-3097-gc16913d34 I have ...
>
> g1@sysi53 ~$ guix --version
> guix (GNU Guix) 0.15.0-6.f9a8fce
>
> ... and when I try to install a package, e.g., ...
>
> g1@sysi53 ~$ guix package -i emacs-no-x
>
> ... I get ...
>
> building /gnu/store/phy1nbsmlml06lkjixjw2dfb4k6wi5al-python-3.6.5.drv...
> -Killed
>
> ... details and vm-image config, attached.
>
> TIA - George

BTW, a VM build one day ago from the one day ago Guix commit ...

7a06cdfa8c101f431227c4c5c86877939022fb1a COMMENT: "7a06cdfa8 gnu:
r-analytics: Update to 3.0."

... doesn't have the problem.

^ permalink raw reply	[flat|nested] 7+ messages in thread

* bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed"
  2018-11-01  2:09 bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed" George Clemmer
  2018-11-01  2:35 ` George Clemmer
@ 2018-11-01  8:45 ` Gábor Boskovits
  2018-11-01 13:45   ` George Clemmer
  1 sibling, 1 reply; 7+ messages in thread
From: Gábor Boskovits @ 2018-11-01  8:45 UTC (permalink / raw)
  To: myglc2; +Cc: 33223

Hello George,

George Clemmer <myglc2@gmail.com> ezt írta (időpont: 2018. nov. 1., Cs, 3:11):
>
> In a 'guix system vm-image' VM produced using Guix from Git
> v0.15.0-3097-gc16913d34 I have ...
>
> g1@sysi53 ~$ guix --version
> guix (GNU Guix) 0.15.0-6.f9a8fce
>
> ... and when I try to install a package, e.g., ...
>
> g1@sysi53 ~$ guix package -i emacs-no-x
>
> ... I get ...
>
> building /gnu/store/phy1nbsmlml06lkjixjw2dfb4k6wi5al-python-3.6.5.drv...
> -Killed
>
> ... details and vm-image config, attached.
>
> TIA - George
>

I just came across this in a guix-help thread, there it seems that the
VM does not have
enough resources to build python3. Can that be the case here?

Best regards,
g_bor

^ permalink raw reply	[flat|nested] 7+ messages in thread

* bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed"
  2018-11-01  8:45 ` Gábor Boskovits
@ 2018-11-01 13:45   ` George Clemmer
  2018-11-01 14:44     ` Gábor Boskovits
  2018-11-03 19:27     ` George Clemmer
  0 siblings, 2 replies; 7+ messages in thread
From: George Clemmer @ 2018-11-01 13:45 UTC (permalink / raw)
  To: Gábor Boskovits; +Cc: 33223

Hello!

Gábor Boskovits <boskovits@gmail.com> writes:

> George Clemmer <myglc2@gmail.com> ezt írta (időpont: 2018. nov. 1., Cs, 3:11):
>>
>> In a 'guix system vm-image' VM produced using Guix from Git
>> v0.15.0-3097-gc16913d34

>> g1@sysi53 ~$ guix package -i emacs-no-x

>> building /gnu/store/phy1nbsmlml06lkjixjw2dfb4k6wi5al-python-3.6.5.drv...
>> -Killed

> I just came across this in a guix-help thread, there it seems that the
> VM does not have enough resources to build python3. Can that be the
> case here?

Thanks. The image was built by ...

guix system vm-image -M 4 -c 4 --image-size=20GB

... and run with 'qemu ... -m 5120'. Based on your comment I tried '-m
20G' and now the GiB Mem shown in top grows to 98.7/19.6, the VM
crashes, and there is no "Killed" message ;-O

Yes it's out of resources. But commit 7a06cdfa8 worked a day
earlier. Why is ...-python-3.6.5.drv... suddenly so hungry? Can Guix
infrastructure issues explain this?

- TIA, George

^ permalink raw reply	[flat|nested] 7+ messages in thread

* bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed"
  2018-11-01 13:45   ` George Clemmer
@ 2018-11-01 14:44     ` Gábor Boskovits
  2018-11-03 19:27     ` George Clemmer
  1 sibling, 0 replies; 7+ messages in thread
From: Gábor Boskovits @ 2018-11-01 14:44 UTC (permalink / raw)
  To: George Clemmer; +Cc: 33223

[-- Attachment #1: Type: text/plain, Size: 1305 bytes --]

George Clemmer <myglc2@gmail.com> ezt írta (időpont: 2018. nov. 1., Cs
14:45):

> Hello!
>
> Gábor Boskovits <boskovits@gmail.com> writes:
>
> > George Clemmer <myglc2@gmail.com> ezt írta (időpont: 2018. nov. 1., Cs,
> 3:11):
> >>
> >> In a 'guix system vm-image' VM produced using Guix from Git
> >> v0.15.0-3097-gc16913d34
>
> >> g1@sysi53 ~$ guix package -i emacs-no-x
>
> >> building /gnu/store/phy1nbsmlml06lkjixjw2dfb4k6wi5al-python-3.6.5.drv...
> >> -Killed
>
> > I just came across this in a guix-help thread, there it seems that the
> > VM does not have enough resources to build python3. Can that be the
> > case here?
>
> Thanks. The image was built by ...
>
> guix system vm-image -M 4 -c 4 --image-size=20GB
>
> ... and run with 'qemu ... -m 5120'. Based on your comment I tried '-m
> 20G' and now the GiB Mem shown in top grows to 98.7/19.6, the VM
> crashes, and there is no "Killed" message ;-O
>
> Yes it's out of resources. But commit 7a06cdfa8 worked a day
> earlier. Why is ...-python-3.6.5.drv... suddenly so hungry? Can Guix
> infrastructure issues explain this?
>

I guess what is happening here, is that there was a substitute yesterday
but not today, so it is most probably related to the infrastructure problem.

>
> - TIA, George
>

[-- Attachment #2: Type: text/html, Size: 2073 bytes --]

^ permalink raw reply	[flat|nested] 7+ messages in thread

* bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed"
  2018-11-01 13:45   ` George Clemmer
  2018-11-01 14:44     ` Gábor Boskovits
@ 2018-11-03 19:27     ` George Clemmer
  2021-02-02 14:30       ` Maxim Cournoyer
  1 sibling, 1 reply; 7+ messages in thread
From: George Clemmer @ 2018-11-03 19:27 UTC (permalink / raw)
  To: Gábor Boskovits, Christopher Baines; +Cc: 33223

I rolled Guix back to the commit that produced this VM and built a fresh
VM. Unfortunately it did not reproduce this bug.

I doubt this was caused by the recent Guix infrastructure problems. I
favor the memory leak theory proposed by Christopher Baines ...

http://lists.gnu.org/archive/html/bug-guix/2018-11/msg00032.html

... for bug#33248: python-minimal compilation is breaking [1].

[1] http://lists.gnu.org/archive/html/bug-guix/2018-11/msg00032.html

^ permalink raw reply	[flat|nested] 7+ messages in thread

* bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed"
  2018-11-03 19:27     ` George Clemmer
@ 2021-02-02 14:30       ` Maxim Cournoyer
  0 siblings, 0 replies; 7+ messages in thread
From: Maxim Cournoyer @ 2021-02-02 14:30 UTC (permalink / raw)
  To: George Clemmer; +Cc: 33223-done

Hi,

George Clemmer <myglc2@gmail.com> writes:

> I rolled Guix back to the commit that produced this VM and built a fresh
> VM. Unfortunately it did not reproduce this bug.
>
> I doubt this was caused by the recent Guix infrastructure problems. I
> favor the memory leak theory proposed by Christopher Baines ...
>
> http://lists.gnu.org/archive/html/bug-guix/2018-11/msg00032.html
>
> ... for bug#33248: python-minimal compilation is breaking [1].
>
> [1] http://lists.gnu.org/archive/html/bug-guix/2018-11/msg00032.html

Yes, that's a likely explanation.  That bug has been fixed by disabling
the problematic test.

Closing.

Maxim.




^ permalink raw reply	[flat|nested] 7+ messages in thread

end of thread, other threads:[~2021-02-02 14:42 UTC | newest]

Thread overview: 7+ messages (download: mbox.gz / follow: Atom feed)
-- links below jump to the message on this page --
2018-11-01  2:09 bug#33223: In vm-image >>> 'guix package -i' >>> "-python-3.6.5.drv... -Killed" George Clemmer
2018-11-01  2:35 ` George Clemmer
2018-11-01  8:45 ` Gábor Boskovits
2018-11-01 13:45   ` George Clemmer
2018-11-01 14:44     ` Gábor Boskovits
2018-11-03 19:27     ` George Clemmer
2021-02-02 14:30       ` Maxim Cournoyer

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