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Fri, 12 Jan 2024 04:51:07 -0800 (PST) From: Simon Tournier In-Reply-To: <87frz7j0tl.fsf@elephly.net> References: <87lesqmmrr.fsf@gmail.com> <87bktmtmol.fsf@elephly.net> <878rnwuemq.fsf@elephly.net> <87y1cz6ez3.fsf@gnu.org> <87frz7j0tl.fsf@elephly.net> Date: Thu, 11 Jan 2024 17:11:21 +0100 Message-ID: <87h6jj26l2.fsf@gmail.com> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: bug-guix@gnu.org List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: bug-guix-bounces+larch=yhetil.org@gnu.org Sender: bug-guix-bounces+larch=yhetil.org@gnu.org X-Migadu-Flow: FLOW_IN X-Migadu-Country: US X-Migadu-Scanner: mx11.migadu.com X-Migadu-Spam-Score: -5.58 X-Spam-Score: -5.58 X-Migadu-Queue-Id: 5C3E33D286 X-TUID: 084yDqZVxS3L Hi, On Mon, 08 Jan 2024 at 16:34, Ricardo Wurmus wrote: > The WIP commit is here: > > https://git.savannah.gnu.org/cgit/guix.git/commit/?h=3Dwip-r&id=3De81a75a= 7b28c633a658ceeb0a728255674f56c58 IIRC, the main feedback [1] of this approach is: - the repositories at https://git.bioconductor.org/package/NAME do = not tag package versions. The only method of organization is branches that are named after *Bioconductor releases* (not package release= s), e.g. RELEASE_3_15. We can only determine the package version by reading its DESCRIPTION file or by looking up the version index f= or all Bioconductor packages (we do that already). This means that = there could be different commits for the same package version in the sa= me release branch =E2=80=94 so we have to include the commit hash an= d a revision counter in the version string. Have you tried the wip commit at scale? Cheers, simon 1:bug#39885: Bioconductor URI, fallback and time-machine Ricardo Wurmus Wed, 10 Aug 2022 20:25:00 +0200 id:878rnwuemq.fsf@elephly.net https://issues.guix.gnu.org/39885 https://issues.guix.gnu.org/msgid/878rnwuemq.fsf@elephly.net https://yhetil.org/guix/878rnwuemq.fsf@elephly.net