unofficial mirror of bug-guix@gnu.org 
 help / color / mirror / code / Atom feed
* bug#51452: Numpy fails test suite with illegal instruction error on Core 2 Duo
@ 2021-10-28  4:32 Maxim Cournoyer
  2021-10-28  5:00 ` Thiago Jung Bauermann via Bug reports for GNU Guix
  0 siblings, 1 reply; 4+ messages in thread
From: Maxim Cournoyer @ 2021-10-28  4:32 UTC (permalink / raw)
  To: 51452

Hi,

While attempting to update numpy to 1.21.3, I encountered the following
failure only on an older Q6700 (Core2Duo) Intel processor:

--8<---------------cut here---------------start------------->8---
starting phase `check'
Building, see build.log...
    ... build in progress
    ... build in progress
    ... build in progress
Build OK
NumPy version 1.21.3
NumPy relaxed strides checking option: True
NumPy CPU features:  SSE SSE2 SSE3 SSSE3* SSE41? POPCNT? SSE42? AVX? F16C? FMA3? AVX2? AVX512F? AVX512CD? AVX512_KNL? AVX512_KNM? AVX512_SKX? AVX512_CLX? AVX512_CNL? AVX512_ICL?
........................................................................ [  0%]
..............................................................x......... [  0%]
........................................................................ [  1%]
........................................................x............... [  1%]
........................................................................ [  2%]
........................................................................ [  2%]
........................................................................ [  3%]
...........................................................ss........... [  3%]
........................................................................ [  4%]
..........................................s............................. [  4%]
........................................................................ [  5%]
x..........x..x..........x.............................................. [  5%]
..............................................s......................... [  5%]
..................................ssssssss.............................. [  6%]
...................................................................ssss. [  6%]
........................................................................ [  7%]
........................................................................ [  7%]
........................................................................ [  8%]
........................................................................ [  8%]
........................................................................ [  9%]
........................................................................ [  9%]
........................................................................ [ 10%]
........................................................................ [ 10%]
........................................................................ [ 11%]
........................................................................ [ 11%]
........................................................................ [ 11%]
........................................................................ [ 12%]
.Fatal Python error: Illegal instruction

Current thread 0x00007ffff7833340 (most recent call first):
  File "<__array_function__ internals>", line 5 in dot
  File "/tmp/guix-build-python-numpy-1.21.3.drv-0/numpy-1.21.3/build/testenv/lib/python3.9/site-packages/numpy/core/tests/test_einsum.py", line 340 in check_einsum_sums
  File "/tmp/guix-build-python-numpy-1.21.3.drv-0/numpy-1.21.3/build/testenv/lib/python3.9/site-packages/numpy/core/tests/test_einsum.py", line 536 in test_einsum_sums_int8
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/python.py", line 183 in pytest_pyfunc_call
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/callers.py", line 187 in _multicall
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 84 in <lambda>
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 93 in _hookexec
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/hooks.py", line 286 in __call__
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/python.py", line 1641 in runtest
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/runner.py", line 162 in pytest_runtest_call
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/callers.py", line 187 in _multicall
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 84 in <lambda>
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 93 in _hookexec
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/hooks.py", line 286 in __call__
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/runner.py", line 255 in <lambda>
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/runner.py", line 311 in from_call
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/runner.py", line 254 in call_runtest_hook
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/runner.py", line 215 in call_and_report
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/runner.py", line 126 in runtestprotocol
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/runner.py", line 109 in pytest_runtest_protocol
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/callers.py", line 187 in _multicall
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 84 in <lambda>
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 93 in _hookexec
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/hooks.py", line 286 in __call__
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/main.py", line 348 in pytest_runtestloop
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/callers.py", line 187 in _multicall
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 84 in <lambda>
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 93 in _hookexec
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/hooks.py", line 286 in __call__
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/main.py", line 323 in _main
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/main.py", line 269 in wrap_session
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/main.py", line 316 in pytest_cmdline_main
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/callers.py", line 187 in _multicall
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 84 in <lambda>
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/manager.py", line 93 in _hookexec
  File "/gnu/store/jl4mf8vm840bpcqb3ks4cpyymr83khnv-python-pluggy-0.13.1/lib/python3.9/site-packages/pluggy/hooks.py", line 286 in __call__
  File "/gnu/store/r5an02g9ddc5xncz87vyn8crib0j13bx-python-pytest-6.2.5/lib/python3.9/site-packages/_pytest/config/__init__.py", line 162 in main
  File "/tmp/guix-build-python-numpy-1.21.3.drv-0/numpy-1.21.3/build/testenv/lib/python3.9/site-packages/numpy/_pytesttester.py", line 197 in __call__
  File "/tmp/guix-build-python-numpy-1.21.3.drv-0/numpy-1.21.3/./runtests.py", line 383 in main
  File "/tmp/guix-build-python-numpy-1.21.3.drv-0/numpy-1.21.3/./runtests.py", line 700 in <module>
error: in phase 'check': uncaught exception:
%exception #<&invoke-error program: "./runtests.py" arguments: ("-j" "4") exit-status: #f term-signal: 4 stop-signal: #f> 
phase `check' failed after 458.4 seconds
--8<---------------cut here---------------end--------------->8---

I'm not sure what's at cause; I have the same problem when testing
against the current 1.17.3.

Thanks,

Maxim




^ permalink raw reply	[flat|nested] 4+ messages in thread

* bug#51452: Numpy fails test suite with illegal instruction error on Core 2 Duo
  2021-10-28  4:32 bug#51452: Numpy fails test suite with illegal instruction error on Core 2 Duo Maxim Cournoyer
@ 2021-10-28  5:00 ` Thiago Jung Bauermann via Bug reports for GNU Guix
  2021-10-29 20:16   ` Maxim Cournoyer
  0 siblings, 1 reply; 4+ messages in thread
From: Thiago Jung Bauermann via Bug reports for GNU Guix @ 2021-10-28  5:00 UTC (permalink / raw)
  To: Maxim Cournoyer; +Cc: 51452

Hello Maxim,

Em quinta-feira, 28 de outubro de 2021, às 01:32:02 -03, Maxim Cournoyer 
escreveu:
> I'm not sure what's at cause; I have the same problem when testing
> against the current 1.17.3.

Just a shot in the dark, but could this be related to the compiler version 
in the master branch? Does the problem still happen on core-updates-frozen?

-- 
Thanks,
Thiago






^ permalink raw reply	[flat|nested] 4+ messages in thread

* bug#51452: Numpy fails test suite with illegal instruction error on Core 2 Duo
  2021-10-28  5:00 ` Thiago Jung Bauermann via Bug reports for GNU Guix
@ 2021-10-29 20:16   ` Maxim Cournoyer
  2021-11-11 19:21     ` Maxim Cournoyer
  0 siblings, 1 reply; 4+ messages in thread
From: Maxim Cournoyer @ 2021-10-29 20:16 UTC (permalink / raw)
  To: Thiago Jung Bauermann; +Cc: 51452

Thiago Jung Bauermann <bauermann@kolabnow.com> writes:

> Hello Maxim,
>
> Em quinta-feira, 28 de outubro de 2021, às 01:32:02 -03, Maxim Cournoyer 
> escreveu:
>> I'm not sure what's at cause; I have the same problem when testing
>> against the current 1.17.3.
>
> Just a shot in the dark, but could this be related to the compiler version 
> in the master branch? Does the problem still happen on core-updates-frozen?

The problem occurred on the cufbc branch; I guess it'd happen the same
on cuf, but I haven't checked.

I should try it on master!

Thanks,

Maxim




^ permalink raw reply	[flat|nested] 4+ messages in thread

* bug#51452: Numpy fails test suite with illegal instruction error on Core 2 Duo
  2021-10-29 20:16   ` Maxim Cournoyer
@ 2021-11-11 19:21     ` Maxim Cournoyer
  0 siblings, 0 replies; 4+ messages in thread
From: Maxim Cournoyer @ 2021-11-11 19:21 UTC (permalink / raw)
  To: Thiago Jung Bauermann; +Cc: 51452-done

Hi,

This is fixed on core-updates-frozen with commit 9e497f44ba.

Thanks to Efraim for suggesting it.

Closing.

Maxim




^ permalink raw reply	[flat|nested] 4+ messages in thread

end of thread, other threads:[~2021-11-11 19:23 UTC | newest]

Thread overview: 4+ messages (download: mbox.gz / follow: Atom feed)
-- links below jump to the message on this page --
2021-10-28  4:32 bug#51452: Numpy fails test suite with illegal instruction error on Core 2 Duo Maxim Cournoyer
2021-10-28  5:00 ` Thiago Jung Bauermann via Bug reports for GNU Guix
2021-10-29 20:16   ` Maxim Cournoyer
2021-11-11 19:21     ` Maxim Cournoyer

Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/guix.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).