From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp10.migadu.com ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms5.migadu.com with LMTPS id 8C7eJQReN2PTZwAAbAwnHQ (envelope-from ) for ; Fri, 30 Sep 2022 23:22:12 +0200 Received: from aspmx1.migadu.com ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp10.migadu.com with LMTPS id KGolJQReN2MVCgEAG6o9tA (envelope-from ) for ; Fri, 30 Sep 2022 23:22:12 +0200 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 515CD2B269 for ; Fri, 30 Sep 2022 23:22:12 +0200 (CEST) Received: from localhost ([::1]:53024 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1oeNSV-0005Jp-1X for larch@yhetil.org; Fri, 30 Sep 2022 17:22:11 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:49360) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1oeNSM-0005Jd-JL for bug-guix@gnu.org; Fri, 30 Sep 2022 17:22:02 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:43988) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1oeNSM-0004MN-5r for bug-guix@gnu.org; Fri, 30 Sep 2022 17:22:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1oeNSL-0005GO-Sn for bug-guix@gnu.org; Fri, 30 Sep 2022 17:22:01 -0400 X-Loop: help-debbugs@gnu.org Subject: bug#42141: blast+ is not reproducible Resent-From: Maxim Cournoyer Original-Sender: "Debbugs-submit" Resent-CC: bug-guix@gnu.org Resent-Date: Fri, 30 Sep 2022 21:22:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 42141 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: Ricardo Wurmus Cc: 42141-done@debbugs.gnu.org, zimoun Received: via spool by 42141-done@debbugs.gnu.org id=D42141.166457286620158 (code D ref 42141); Fri, 30 Sep 2022 21:22:01 +0000 Received: (at 42141-done) by debbugs.gnu.org; 30 Sep 2022 21:21:06 +0000 Received: from localhost ([127.0.0.1]:43066 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oeNRS-0005F4-AA for submit@debbugs.gnu.org; Fri, 30 Sep 2022 17:21:06 -0400 Received: from mail-qk1-f171.google.com ([209.85.222.171]:43970) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oeNRQ-0005EE-H8 for 42141-done@debbugs.gnu.org; Fri, 30 Sep 2022 17:21:04 -0400 Received: by mail-qk1-f171.google.com with SMTP id o7so3603446qkj.10 for <42141-done@debbugs.gnu.org>; Fri, 30 Sep 2022 14:21:04 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20210112; h=content-transfer-encoding:mime-version:user-agent:message-id :in-reply-to:date:references:subject:cc:to:from:from:to:cc:subject :date; bh=PlwCQqHPRyeJV2+ywb9hJYvr/0AuBhubE+Fs6/3vmqo=; b=PuzAcTq7lx7at0Ia4sU/YzVF5V6BWXXpZJIFQtUQ5fiQ8ABKfFxpERG806hakAvHkl Zs3mwZyhLs2wYDI9bROI36mUtJNpLlB3VCjKNiNhdED1OwyBdVKQGWHDsZwAK58d9GTK EZC4icp0ilBqtsYvdHR0V3/8Ips3R6+0QZUn2EPOJ+8dHvMhYUNunSalptnMFso7vb9N Hm3f2vu/m8SZaUaJOHwS/jGBYI/k71cBeDZtDjCtJkrgiTgrLfqWK41HqprCP9RU5QhI dbYHXTMAZ+dh3ef3EeSRQ6qNJs9YyPiy8oXMhNfUfLTTdNKu7iRVMCGxDk0uKHbXBO7h R1Cg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; h=content-transfer-encoding:mime-version:user-agent:message-id :in-reply-to:date:references:subject:cc:to:from:x-gm-message-state :from:to:cc:subject:date; bh=PlwCQqHPRyeJV2+ywb9hJYvr/0AuBhubE+Fs6/3vmqo=; b=SYUz4BCxj486GVjBI+FD/dRafOoEJAwN+MVIc9jQqXDvK4kyZEZ6DcNG4THeG5ba3H EB42ck84jdT5h0Bph4Xp4CeeeaY+vTOzPWxPBgGV+f5JKsxKjGpR2UxtPMwCW5JYqryg vwgvMn3ZMGgsMGP8/sM5cjWC8RfnegoK9IsZ6QYFpj+EFzKAOgp/DLxLzOgsliMWk600 bbtqR41wzcMm6VfUpxZrvfXPvI3yaTJmS1EzW9sfkXHJmI/yOSGF58bkyh5CtMtD3kMp 3x8wUw65yKMgW/EhYdh2UyaygIkCw/lRWya2Uh2+0DWGrjT+MIox5j3tcJJVI9Cj6tLx prZA== X-Gm-Message-State: ACrzQf21enysEIteCvVh5oJgBJmVIyWbkED7B24Km1arHP4HsWWKFKou o2UI+gCEuqNi/r7n34V9Ieo+mggw8w0= X-Google-Smtp-Source: AMsMyM6tEnAMdC4cvCHYgxqGzDXVV37Eld6reH56yAjyzRQCHoxRaQ43pnIg8uoxYig2qQym8Lu7eg== X-Received: by 2002:a37:f50b:0:b0:6cb:be4d:6ce8 with SMTP id l11-20020a37f50b000000b006cbbe4d6ce8mr7702474qkk.135.1664572858855; Fri, 30 Sep 2022 14:20:58 -0700 (PDT) Received: from hurd (dsl-10-141-205.b2b2c.ca. [72.10.141.205]) by smtp.gmail.com with ESMTPSA id y18-20020a05622a005200b003445bb107basm3037562qtw.75.2022.09.30.14.20.58 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Fri, 30 Sep 2022 14:20:58 -0700 (PDT) From: Maxim Cournoyer References: <87sgecmroj.fsf@elephly.net> <87k05now4i.fsf@gmail.com> <87h70qsf9m.fsf@elephly.net> <87zgehrg5w.fsf@elephly.net> <87ill5mucy.fsf@gmail.com> <87v8p50xmp.fsf@gmail.com> <87mtahq65i.fsf@elephly.net> Date: Fri, 30 Sep 2022 17:20:57 -0400 In-Reply-To: <87mtahq65i.fsf@elephly.net> (Ricardo Wurmus's message of "Fri, 30 Sep 2022 16:38:06 +0200") Message-ID: <87a66glft2.fsf@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/28.1 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: bug-guix@gnu.org List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: bug-guix-bounces+larch=yhetil.org@gnu.org Sender: "bug-Guix" X-Migadu-Flow: FLOW_IN X-Migadu-Country: US ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1664572932; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; bh=PlwCQqHPRyeJV2+ywb9hJYvr/0AuBhubE+Fs6/3vmqo=; b=ZpSiBcqs2JR+h9dBVDv59/SaH3vUkNPBtNHTsHfG17uPNgXQvTYR2RPwPx+UBmSdwTIkPP Chh4H0/oIeQCEwguTor6Q7ffy3VkO0Kv/cOkw6ntdvmS+KdX9KgDuCTy85tJHSFLmkZgqq LHni5exekPGhXBzK+o8drxywl4EAcQ1B5smhUqbM/jccuCy1QjCLpzLuuXdsB6jtBX2Tcp kUP+O0E3Bky6wpHK/rSBJ3bJYSjHwSthHOKhA6rsPCusql8yT5hvK5u75ANqNc5zup4/A/ /MA8uIZCu8PNmwO7iHnh09sr6u3llhIc9qzxk2Kpze/e/zYdeZbaWqtzw11CVw== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1664572932; a=rsa-sha256; cv=none; b=O/ir2LWJnre9Vv9TA7/T7CJFYFMRrk5F7tOQX6ca9Vgp6GY2x9e12AggRaCFPGSOewD9Zs rsMKrc9YjKrun2ll1puDLG/yC7mMi4uJtQEMe7ltHBpl797+IS4WHgNU4aR897d/K9LJd0 tj06xpi9wVEvL2RjZWDBbGfHvtOncTqUQKNCF+SHp2Pae3fiVg7VVJhGpBag4mQ9EzMIdJ uzorAdZcZ9Zm3y12xmEOLIWBsFf1775MaWySR3eTLSC7Li3kgCA4kBxippstWPBNjM7gmz HKiTwOMKqa4CN9YXQRJG+4VsgkJwPZvH2PUTrbuWTukitH46zrSx3H0ctiKmeQ== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=PuzAcTq7; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 4.86 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20210112 header.b=PuzAcTq7; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: 515CD2B269 X-Spam-Score: 4.86 X-Migadu-Scanner: scn0.migadu.com X-TUID: BmitQt7dCjDS Hi, Ricardo Wurmus writes: > zimoun writes: > >> Hi, >> >> On Thu, 29 Sep 2022 at 23:09, Maxim Cournoyer wrote: >>> Ricardo Wurmus writes: >>> >>>> Fixed with commit 1ee2d117d8fa9e2e0d4ec46cc5555497bb5e6337. >>> >>> Yay! Thank you! And for my curiosity, how did I get the two build >>> farms to agree on an identical build, as reported in 'guix challenge'? >>> >>> That is odd. >> >> Because blast+ is multi-outputs and =E2=80=99out=E2=80=99 is fine contra= ry to =E2=80=99include=E2=80=99: >> >> $ guix challenge blast+:include >> /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include conten= ts differ: >> local hash: 0q4nssknlmc54m8abndn9bhrlwm4m28lkb75i1wnwr0ghbalj02x >> https://ci.guix.gnu.org/nar/lzip/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blas= t%2B-2.11.0-include: 0q4nssknlmc54m8abndn9bhrlwm4m28lkb75i1wnwr0ghbalj02x >> https://bordeaux.guix.gnu.org/nar/lzip/0kbsdr61qpj0vkc6s8g2kbp4dq936n0= p-blast%2B-2.11.0-include: 0cakizfsqb1lla62cmwnng1h9gvqgf3lyjk0k7lkiaisj713= mpzx >> differing files: >> /include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h >> /include/ncbi-tools++/ncbi-tools++/ncbiconf_unix.h >> >> 1 store items were analyzed: >> - 0 (0.0%) were identical >> - 1 (100.0%) differed >> - 0 (0.0%) were inconclusive > > Ah, thanks for explaining! Ah! Shouldn't the default be to compare all outputs? It seems that'd be less surprising and useful. What do you think? --=20 Maxim