From: Ricardo Wurmus <rekado@elephly.net>
To: zimoun <zimon.toutoune@gmail.com>
Cc: 52906@debbugs.gnu.org
Subject: bug#52906: python-biopython conflicts with python-numpy
Date: Fri, 31 Dec 2021 11:14:22 +0100 [thread overview]
Message-ID: <877dblgjs5.fsf@elephly.net> (raw)
In-Reply-To: <86o84xpzhv.fsf@gmail.com>
zimoun <zimon.toutoune@gmail.com> writes:
> Hi,
>
> Using 7022eb6, the package ’python-biopython’ propagates
> ’python-numpy’, i.e., python-numpy@1.20.
Back then we reverted to numpy 1.20.x as the default because of numba,
which did not work with 1.21. I’m now upgrading numba (and llvmlite) to
a more recent release candidate, which should bring compatibility with
numpy 1.21.
If that works we’ll make python-numpy-next the new python-numpy.
Your patch is an acceptable workaround. Arguably this should have been
done when I made numpy 1.20 the default on the core-updates-frozen
branch. I’ll apply your patch later today unless the switch to numpy
1.21 as the default is successful.
--
Ricardo
next prev parent reply other threads:[~2021-12-31 10:19 UTC|newest]
Thread overview: 8+ messages / expand[flat|nested] mbox.gz Atom feed top
2021-12-30 21:13 bug#52906: python-biopython conflicts with python-numpy zimoun
2021-12-30 23:55 ` Leo Famulari
2021-12-31 10:14 ` Ricardo Wurmus [this message]
2021-12-31 10:51 ` zimoun
2021-12-31 12:43 ` Ricardo Wurmus
2021-12-31 13:16 ` zimoun
2021-12-31 20:18 ` Ricardo Wurmus
2021-12-31 12:50 ` Ricardo Wurmus
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