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From: "Ludovic Courtès" <ludovic.courtes@inria.fr>
To: Efraim Flashner <efraim@flashner.co.il>
Cc: 63986@debbugs.gnu.org, Nicolas Graves <ngraves@ngraves.fr>,
	csantosb@inventati.org, Simon Tournier <zimon.toutoune@gmail.com>
Subject: bug#63986: Julia is very slow
Date: Fri, 29 Sep 2023 10:46:07 +0200	[thread overview]
Message-ID: <877co9wenk.fsf@inria.fr> (raw)
In-Reply-To: <ZRKkDNdJg1DaZVKA@3900XT> (Efraim Flashner's message of "Tue, 26 Sep 2023 12:27:40 +0300")

Hi,

Efraim Flashner <efraim@flashner.co.il> skribis:

> On Mon, Sep 25, 2023 at 04:46:57PM +0200, Ludovic Courtès wrote:

[...]

>> >   /gnu/store/h5mgc7ar7a05f9rwrd1makhzays5wd3s-julia-1.8.3/bin/../lib/julia/liblapack.so: undefined symbol: dsfrk_64_
>> 
>> The ‘_64’ suffix is added by a patch in this very series, that adds
>> ‘SYMBOLSUFFIX=64_’ to ‘openblas-ilp64’.
>> 
>> I don’t know what the rationale was for that configuration change, but
>> this is a good area of investigation.
>> 
>> Efraim, WDYT?
>
> the SYMBOLSUFFIX change seems to be standard across other distributions,
> and in fact there seem to be packages out there which rely on it
> directly.
>
> Looking at this error specifically and also the pcre2-8 errors we get
> during the 'test phase for julia, it seems the suggested fix is to build
> those libraries with julia. So we'd want to replace the pcre2 and the
> lapack libraries in the julia sources (for pcre2 for all the
> architectures, for lapack for x86_64 specifically) and let julia build
> and link to them during the build phase.

That would seem like a step backwards though, no?  Usually we prefer to
unbundle things.

Actually, why does liblapack.so end up in Julia itself, as opposed to
just linking to libopenblas.so?

Ludo’.




  reply	other threads:[~2023-09-29  8:47 UTC|newest]

Thread overview: 36+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2023-06-09 21:42 bug#63986: Julia is very slow Cayetano Santos via Bug reports for GNU Guix
2023-06-14 16:00 ` Ludovic Courtès
2023-06-19 16:13   ` Simon Tournier
2023-06-21 14:36     ` Ludovic Courtès
2023-06-21 20:39       ` Cayetano Santos via Bug reports for GNU Guix
2023-06-22 13:26         ` Cayetano Santos via Bug reports for GNU Guix
2023-06-22 14:37           ` Efraim Flashner
2023-06-22 15:52           ` Simon Tournier
2023-06-22 16:25             ` Efraim Flashner
2023-06-22 16:56               ` Cayetano Santos via Bug reports for GNU Guix
2023-06-22 17:12               ` Simon Tournier
2023-06-23  9:09                 ` Ludovic Courtès
2023-06-23  9:16                   ` Efraim Flashner
2023-06-23 12:11                     ` Simon Tournier
2023-06-23 13:23                     ` Simon Tournier
2023-06-23 14:16                       ` Efraim Flashner
2023-07-06 14:13                         ` Ludovic Courtès
2023-08-20 20:53                           ` Ludovic Courtès
2023-09-14 10:33                             ` Efraim Flashner
2023-09-15 19:45                               ` Cayetano Santos via Bug reports for GNU Guix
2023-09-16 10:47                               ` Simon Tournier
2023-09-16 11:18                                 ` Simon Tournier
2023-09-20 15:57                               ` Simon Tournier
2023-09-24  8:37                                 ` Cayetano Santos via Bug reports for GNU Guix
2023-09-25 14:46                                 ` Ludovic Courtès
2023-09-26  9:27                                   ` Efraim Flashner
2023-09-29  8:46                                     ` Ludovic Courtès [this message]
2023-09-29 10:12                                       ` Efraim Flashner
2023-09-28 11:41                                 ` Efraim Flashner
2023-06-22 18:47               ` Simon Tournier
2023-06-22 18:55                 ` Efraim Flashner
2023-06-22 20:13                 ` Efraim Flashner
2023-06-23 12:06                   ` Simon Tournier
2023-09-15 19:49 ` bug#63986: Fixed Cayetano Santos via Bug reports for GNU Guix
2023-09-16 10:23 ` bug#63986: [PATCH 0/2] Fix bug#63986: Julia is very slow Simon Tournier
     [not found] ` <handler.63986.D63986.169480740431199.notifdone@debbugs.gnu.org>
2023-09-16 11:03   ` Simon Tournier

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