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[84.118.73.55]) by smtp.gmail.com with ESMTPSA id ck19sm4620998ejb.99.2020.10.08.11.25.50 for <43855@debbugs.gnu.org> (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Thu, 08 Oct 2020 11:25:51 -0700 (PDT) From: Malte Frank Gerdes Date: Thu, 08 Oct 2020 20:25:50 +0200 Message-ID: <86lfgglglt.fsf@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.1 (gnu/linux) MIME-Version: 1.0 Content-Type: multipart/mixed; boundary="=-=-=" X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Spam-Score: -1.0 (-) X-BeenThere: bug-guix@gnu.org List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: bug-guix-bounces+larch=yhetil.org@gnu.org Sender: "bug-Guix" X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=fail (rsa verify failed) header.d=gmail.com header.s=20161025 header.b=kTSyx6ra; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of bug-guix-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=bug-guix-bounces@gnu.org X-Spam-Score: 0.09 X-TUID: OqaRJ4CnOJKC --=-=-= Content-Type: text/plain It seems python-shapely assumes musl libc, because the store path of glibc was missing in one place. Now the Test suite runs without failure. Malte --=-=-= Content-Type: text/x-patch Content-Disposition: inline; filename=0001-gnu-python-shapely-Update-to-1.7.1.patch >From a320ab014d60f5401f409eb37ccb16aa23c32cf1 Mon Sep 17 00:00:00 2001 From: Malte Frank Gerdes Date: Thu, 8 Oct 2020 20:20:12 +0200 Subject: [PATCH] gnu: python-shapely: Update to 1.7.1. * gnu/packages/python-xyz.scm (python-shapely): Update to 1.7.1. --- gnu/packages/python-xyz.scm | 9 ++++++--- 1 file changed, 6 insertions(+), 3 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 459526941b..fa4a4f4954 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -507,14 +507,14 @@ pidof, tty, taskset, pmap.") (define-public python-shapely (package (name "python-shapely") - (version "1.6.4.post2") + (version "1.7.1") (source (origin (method url-fetch) (uri (pypi-uri "Shapely" version)) (sha256 (base32 - "03r42fmd9alp6r3q95ad6rldq2f7n1wimrw53zy5kpn33yv7pf64")))) + "0adiz4jwmwxk7k1awqifb1a9bj5x4nx4gglb5dz9liam21674h8n")))) (build-system python-build-system) (native-inputs `(("python-cython" ,python-cython) @@ -533,11 +533,14 @@ pidof, tty, taskset, pmap.") (let ((geos (assoc-ref inputs "geos")) (glibc (assoc-ref inputs ,(if (%current-target-system) "cross-libc" "libc")))) - (substitute* "shapely/geos.py" + (substitute* '("shapely/geos.py" "shapely/_buildcfg.py") (("_lgeos = load_dll\\('geos_c', fallbacks=.*\\)") (string-append "_lgeos = load_dll('geos_c', fallbacks=['" geos "/lib/libgeos_c.so'])")) (("free = load_dll\\('c'\\)\\.free") + (string-append "free = load_dll('c', fallbacks=['" + glibc "/lib/libc.so.6']).free")) + (("free = load_dll\\('c', fallbacks=.*\\)\\.free") (string-append "free = load_dll('c', fallbacks=['" glibc "/lib/libc.so.6']).free")))) #t))))) -- 2.28.0 --=-=-=--