* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
[not found] ` <20200519162228.GA29967@jasmine.lan>
@ 2020-05-19 17:27 ` Leo Famulari
2020-05-19 18:16 ` Danny Milosavljevic
0 siblings, 1 reply; 20+ messages in thread
From: Leo Famulari @ 2020-05-19 17:27 UTC (permalink / raw)
To: 41406; +Cc: Pierre Neidhardt
The Docker package should not refer to the Go compiler after it is
built:
On Tue, May 19, 2020 at 12:22:28PM -0400, Leo Famulari wrote:
> On Tue, May 19, 2020 at 05:58:54PM +0200, Pierre Neidhardt wrote:
> > I haven't looked at the details, but
> >
> > --8<---------------cut here---------------start------------->8---
> > > guix size docker
> > store item total self
> > /gnu/store/w8gjhcw6a16rk1dvxa97bz2znal5fihm-go-1.13.9 639.1 350.7 28.2%
> > --8<---------------cut here---------------end--------------->8---
> >
> > Then
> >
> > --8<---------------cut here---------------start------------->8---
> > > grep w8gjhcw6a16rk1dvxa97bz2znal5fihm dockerd
> > Binary file dockerd matches
> > --8<---------------cut here---------------end--------------->8---
>
> I don't think that package is using the go-build-system, so that is
> probably the reason for the bogus reference.
^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-19 17:27 ` bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?) Leo Famulari
@ 2020-05-19 18:16 ` Danny Milosavljevic
2020-05-19 18:25 ` Leo Famulari
0 siblings, 1 reply; 20+ messages in thread
From: Danny Milosavljevic @ 2020-05-19 18:16 UTC (permalink / raw)
To: Leo Famulari; +Cc: 41406, Pierre Neidhardt
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Hi Leo,
the patch below makes the grep return nothing, but guix size still contains go.
diff --git a/gnu/packages/docker.scm b/gnu/packages/docker.scm
index c95ca3f9d7..bf009a792b 100644
--- a/gnu/packages/docker.scm
+++ b/gnu/packages/docker.scm
@@ -544,7 +544,9 @@ built-in registry server of Docker.")
(install-file (string-append "bundles/dynbinary-daemon/dockerd-"
(getenv "VERSION"))
out-bin)
- #t))))))
+ #t)))
+ (add-after 'install 'remove-go-references
+ (assoc-ref go:%standard-phases 'remove-go-references)))))
(inputs
`(("btrfs-progs" ,btrfs-progs)
("containerd" ,containerd) ; for containerd-shim
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^ permalink raw reply related [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-19 18:16 ` Danny Milosavljevic
@ 2020-05-19 18:25 ` Leo Famulari
2020-05-19 18:32 ` Danny Milosavljevic
0 siblings, 1 reply; 20+ messages in thread
From: Leo Famulari @ 2020-05-19 18:25 UTC (permalink / raw)
To: Danny Milosavljevic; +Cc: 41406, Pierre Neidhardt
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On Tue, May 19, 2020 at 08:16:41PM +0200, Danny Milosavljevic wrote:
> Hi Leo,
>
> the patch below makes the grep return nothing, but guix size still contains go.
What about `guix gc --references /gnu/store/...-docker`?
>
> diff --git a/gnu/packages/docker.scm b/gnu/packages/docker.scm
> index c95ca3f9d7..bf009a792b 100644
> --- a/gnu/packages/docker.scm
> +++ b/gnu/packages/docker.scm
> @@ -544,7 +544,9 @@ built-in registry server of Docker.")
> (install-file (string-append "bundles/dynbinary-daemon/dockerd-"
> (getenv "VERSION"))
> out-bin)
> - #t))))))
> + #t)))
> + (add-after 'install 'remove-go-references
> + (assoc-ref go:%standard-phases 'remove-go-references)))))
> (inputs
> `(("btrfs-progs" ,btrfs-progs)
> ("containerd" ,containerd) ; for containerd-shim
>
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-19 18:25 ` Leo Famulari
@ 2020-05-19 18:32 ` Danny Milosavljevic
2020-05-19 18:43 ` Julien Lepiller
` (2 more replies)
0 siblings, 3 replies; 20+ messages in thread
From: Danny Milosavljevic @ 2020-05-19 18:32 UTC (permalink / raw)
To: Leo Famulari; +Cc: 41406, Pierre Neidhardt
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On Tue, 19 May 2020 14:25:23 -0400
Leo Famulari <leo@famulari.name> wrote:
> guix gc --references
Doesn't contain go.
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-19 18:32 ` Danny Milosavljevic
@ 2020-05-19 18:43 ` Julien Lepiller
2020-05-19 19:00 ` Leo Famulari
2020-05-20 6:16 ` Pierre Neidhardt
2 siblings, 0 replies; 20+ messages in thread
From: Julien Lepiller @ 2020-05-19 18:43 UTC (permalink / raw)
To: Danny Milosavljevic, Leo Famulari; +Cc: 41406, Pierre Neidhardt
Le 19 mai 2020 14:32:34 GMT-04:00, Danny Milosavljevic <dannym@scratchpost.org> a écrit :
>On Tue, 19 May 2020 14:25:23 -0400
>Leo Famulari <leo@famulari.name> wrote:
>
>> guix gc --references
>
>Doesn't contain go.
You can try guix graph -t references --path /gnu/store/…-docker /gnu/store/…-go
That should tell you which package references go and how it gets in the closure of docker.
^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-19 18:32 ` Danny Milosavljevic
2020-05-19 18:43 ` Julien Lepiller
@ 2020-05-19 19:00 ` Leo Famulari
2020-05-19 19:05 ` Danny Milosavljevic
2020-05-20 6:16 ` Pierre Neidhardt
2 siblings, 1 reply; 20+ messages in thread
From: Leo Famulari @ 2020-05-19 19:00 UTC (permalink / raw)
To: Danny Milosavljevic; +Cc: 41406, Pierre Neidhardt
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On Tue, May 19, 2020 at 08:32:34PM +0200, Danny Milosavljevic wrote:
> On Tue, 19 May 2020 14:25:23 -0400
> Leo Famulari <leo@famulari.name> wrote:
>
> > guix gc --references
>
> Doesn't contain go.
Then your patch works!
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-19 19:00 ` Leo Famulari
@ 2020-05-19 19:05 ` Danny Milosavljevic
0 siblings, 0 replies; 20+ messages in thread
From: Danny Milosavljevic @ 2020-05-19 19:05 UTC (permalink / raw)
To: Leo Famulari; +Cc: 41406-done, Pierre Neidhardt
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Hi Leo,
> Then your patch works!
ok!
Pushed to guix master as commit f523eaba7b5460937a230a824550243d75e5f1dc.
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-19 18:32 ` Danny Milosavljevic
2020-05-19 18:43 ` Julien Lepiller
2020-05-19 19:00 ` Leo Famulari
@ 2020-05-20 6:16 ` Pierre Neidhardt
2020-05-20 16:43 ` Leo Famulari
2 siblings, 1 reply; 20+ messages in thread
From: Pierre Neidhardt @ 2020-05-20 6:16 UTC (permalink / raw)
To: Danny Milosavljevic, Leo Famulari; +Cc: 41406
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Danny Milosavljevic <dannym@scratchpost.org> writes:
> On Tue, 19 May 2020 14:25:23 -0400
> Leo Famulari <leo@famulari.name> wrote:
>
>> guix gc --references
>
> Doesn't contain go.
So why did `guix size` contain go?
--
Pierre Neidhardt
https://ambrevar.xyz/
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-20 6:16 ` Pierre Neidhardt
@ 2020-05-20 16:43 ` Leo Famulari
2020-05-20 17:05 ` Marius Bakke
` (2 more replies)
0 siblings, 3 replies; 20+ messages in thread
From: Leo Famulari @ 2020-05-20 16:43 UTC (permalink / raw)
To: Pierre Neidhardt; +Cc: 41406
On Wed, May 20, 2020 at 08:16:32AM +0200, Pierre Neidhardt wrote:
> Danny Milosavljevic <dannym@scratchpost.org> writes:
>
> > On Tue, 19 May 2020 14:25:23 -0400
> > Leo Famulari <leo@famulari.name> wrote:
> >
> >> guix gc --references
> >
> > Doesn't contain go.
>
> So why did `guix size` contain go?
`guix size` also accounts for build-time dependencies, and Docker is
written in Go.
^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-20 16:43 ` Leo Famulari
@ 2020-05-20 17:05 ` Marius Bakke
2020-05-20 18:30 ` Julien Lepiller
2020-05-20 21:09 ` Pierre Neidhardt
2 siblings, 0 replies; 20+ messages in thread
From: Marius Bakke @ 2020-05-20 17:05 UTC (permalink / raw)
To: Leo Famulari, Pierre Neidhardt; +Cc: 41406
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Leo Famulari <leo@famulari.name> writes:
> On Wed, May 20, 2020 at 08:16:32AM +0200, Pierre Neidhardt wrote:
>> Danny Milosavljevic <dannym@scratchpost.org> writes:
>>
>> > On Tue, 19 May 2020 14:25:23 -0400
>> > Leo Famulari <leo@famulari.name> wrote:
>> >
>> >> guix gc --references
>> >
>> > Doesn't contain go.
>>
>> So why did `guix size` contain go?
>
> `guix size` also accounts for build-time dependencies, and Docker is
> written in Go.
`guix size` only looks at the closure size. One of Dockers dependencies
must be carrying the spurious Go reference (guix graph might help here).
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-20 16:43 ` Leo Famulari
2020-05-20 17:05 ` Marius Bakke
@ 2020-05-20 18:30 ` Julien Lepiller
2020-05-21 9:41 ` zimoun
2020-05-20 21:09 ` Pierre Neidhardt
2 siblings, 1 reply; 20+ messages in thread
From: Julien Lepiller @ 2020-05-20 18:30 UTC (permalink / raw)
To: Leo Famulari, Pierre Neidhardt; +Cc: 41406
Le 20 mai 2020 12:43:16 GMT-04:00, Leo Famulari <leo@famulari.name> a écrit :
>On Wed, May 20, 2020 at 08:16:32AM +0200, Pierre Neidhardt wrote:
>> Danny Milosavljevic <dannym@scratchpost.org> writes:
>>
>> > On Tue, 19 May 2020 14:25:23 -0400
>> > Leo Famulari <leo@famulari.name> wrote:
>> >
>> >> guix gc --references
>> >
>> > Doesn't contain go.
>>
>> So why did `guix size` contain go?
>
>`guix size` also accounts for build-time dependencies, and Docker is
>written in Go.
As I said:
guix graph -t references --path /gnu/store/…-docker /gnu/store/…-go
Should give you the shortest path from docker to go, looking only at references.
^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-20 16:43 ` Leo Famulari
2020-05-20 17:05 ` Marius Bakke
2020-05-20 18:30 ` Julien Lepiller
@ 2020-05-20 21:09 ` Pierre Neidhardt
2020-05-20 23:01 ` Leo Famulari
2 siblings, 1 reply; 20+ messages in thread
From: Pierre Neidhardt @ 2020-05-20 21:09 UTC (permalink / raw)
To: Leo Famulari; +Cc: 41406
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Leo Famulari <leo@famulari.name> writes:
> `guix size` also accounts for build-time dependencies, and Docker is
> written in Go.
Are you sure about this? Marius seems to disagree unless I'm
misunderstanding the two statements.
--
Pierre Neidhardt
https://ambrevar.xyz/
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-20 21:09 ` Pierre Neidhardt
@ 2020-05-20 23:01 ` Leo Famulari
2020-05-21 7:02 ` Pierre Neidhardt
0 siblings, 1 reply; 20+ messages in thread
From: Leo Famulari @ 2020-05-20 23:01 UTC (permalink / raw)
To: Pierre Neidhardt; +Cc: 41406
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On Wed, May 20, 2020 at 11:09:37PM +0200, Pierre Neidhardt wrote:
> Leo Famulari <leo@famulari.name> writes:
>
> > `guix size` also accounts for build-time dependencies, and Docker is
> > written in Go.
>
> Are you sure about this? Marius seems to disagree unless I'm
> misunderstanding the two statements.
I thought I was correct but it's certainly possible I'm wrong! The
manual isn't clear IMO and I don't have time to read the code.
The `guix graph` suggestions should help get to the bottom of it,
though.
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-20 23:01 ` Leo Famulari
@ 2020-05-21 7:02 ` Pierre Neidhardt
0 siblings, 0 replies; 20+ messages in thread
From: Pierre Neidhardt @ 2020-05-21 7:02 UTC (permalink / raw)
To: Leo Famulari; +Cc: 41406
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Leo Famulari <leo@famulari.name> writes:
> I thought I was correct but it's certainly possible I'm wrong! The
> manual isn't clear IMO and I don't have time to read the code.
I remember having a similar confusion in the past. We should make it
more explicit what `guix size` does compared to `guix gc --references'
for instance.
--
Pierre Neidhardt
https://ambrevar.xyz/
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-20 18:30 ` Julien Lepiller
@ 2020-05-21 9:41 ` zimoun
2020-05-21 16:20 ` Leo Famulari
0 siblings, 1 reply; 20+ messages in thread
From: zimoun @ 2020-05-21 9:41 UTC (permalink / raw)
To: Julien Lepiller; +Cc: 41406, Pierre Neidhardt
On Wed, 20 May 2020 at 20:31, Julien Lepiller <julien@lepiller.eu> wrote:
> guix graph -t references --path /gnu/store/…-docker /gnu/store/…-go
>
> Should give you the shortest path from docker to go, looking only at references.
It seems that the culprit is the package 'runc'.
--8<---------------cut here---------------start------------->8---
guix graph -t references \
/gnu/store/scmx1fphz8kphx37rbckiqvkkh125y6d-docker-19.03.7 \
--path \
/gnu/store/w8gjhcw6a16rk1dvxa97bz2znal5fihm-go-1.13.9
/gnu/store/scmx1fphz8kphx37rbckiqvkkh125y6d-docker-19.03.7
/gnu/store/vycnhl10jc3jv4yc7dy1p6maykipidkp-runc-1.0.0-rc6
/gnu/store/w8gjhcw6a16rk1dvxa97bz2znal5fihm-go-1.13.9
--8<---------------cut here---------------end--------------->8---
^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-21 9:41 ` zimoun
@ 2020-05-21 16:20 ` Leo Famulari
2020-05-26 14:17 ` Danny Milosavljevic
0 siblings, 1 reply; 20+ messages in thread
From: Leo Famulari @ 2020-05-21 16:20 UTC (permalink / raw)
To: zimoun; +Cc: Pierre Neidhardt, 41406
On Thu, May 21, 2020 at 11:41:54AM +0200, zimoun wrote:
> On Wed, 20 May 2020 at 20:31, Julien Lepiller <julien@lepiller.eu> wrote:
>
> > guix graph -t references --path /gnu/store/…-docker /gnu/store/…-go
> >
> > Should give you the shortest path from docker to go, looking only at references.
>
> It seems that the culprit is the package 'runc'.
>
> --8<---------------cut here---------------start------------->8---
> guix graph -t references \
> /gnu/store/scmx1fphz8kphx37rbckiqvkkh125y6d-docker-19.03.7 \
> --path \
> /gnu/store/w8gjhcw6a16rk1dvxa97bz2znal5fihm-go-1.13.9
>
> /gnu/store/scmx1fphz8kphx37rbckiqvkkh125y6d-docker-19.03.7
> /gnu/store/vycnhl10jc3jv4yc7dy1p6maykipidkp-runc-1.0.0-rc6
> /gnu/store/w8gjhcw6a16rk1dvxa97bz2znal5fihm-go-1.13.9
> --8<---------------cut here---------------end--------------->8---
We should make the linter complain about this reference.
^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-21 16:20 ` Leo Famulari
@ 2020-05-26 14:17 ` Danny Milosavljevic
2020-05-26 16:24 ` Leo Famulari
0 siblings, 1 reply; 20+ messages in thread
From: Danny Milosavljevic @ 2020-05-26 14:17 UTC (permalink / raw)
To: Leo Famulari; +Cc: 41406, Pierre Neidhardt
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Hi Leo,
On Thu, 21 May 2020 12:20:09 -0400
Leo Famulari <leo@famulari.name> wrote:
> We should make the linter complain about this [go] reference.
What do you mean exactly? How would it know, given that that was a runtime
dependency? Would guix lint build the derivation and check for references
to go etc? Sounds doable.
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-26 14:17 ` Danny Milosavljevic
@ 2020-05-26 16:24 ` Leo Famulari
2020-05-27 11:53 ` Danny Milosavljevic
0 siblings, 1 reply; 20+ messages in thread
From: Leo Famulari @ 2020-05-26 16:24 UTC (permalink / raw)
To: Danny Milosavljevic; +Cc: 41406, Pierre Neidhardt
On Tue, May 26, 2020 at 04:17:01PM +0200, Danny Milosavljevic wrote:
> Hi Leo,
>
> On Thu, 21 May 2020 12:20:09 -0400
> Leo Famulari <leo@famulari.name> wrote:
>
> > We should make the linter complain about this [go] reference.
>
> What do you mean exactly? How would it know, given that that was a runtime
> dependency? Would guix lint build the derivation and check for references
> to go etc? Sounds doable.
I had confused this sitation with the linter's warnings about "inputs
that should be native".
It's probably not worth adding a linter check for this, because everyone
should be using the go-build-system for their Go packages, and if it
doesn't work, that's a bug in the build system, not in the package
definition :)
I don't think the linter should build things and check for spurious
references. At least, not just for this case.
^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-26 16:24 ` Leo Famulari
@ 2020-05-27 11:53 ` Danny Milosavljevic
2020-05-27 17:22 ` Leo Famulari
0 siblings, 1 reply; 20+ messages in thread
From: Danny Milosavljevic @ 2020-05-27 11:53 UTC (permalink / raw)
To: Leo Famulari; +Cc: 41406, Pierre Neidhardt
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Hi Leo,
On Tue, 26 May 2020 12:24:22 -0400
Leo Famulari <leo@famulari.name> wrote:
> It's probably not worth adding a linter check for this, because everyone
> should be using the go-build-system for their Go packages, and if it
> doesn't work, that's a bug in the build system, not in the package
Hmm, but runc--the culprit here--does use go-build-system and still retains
a go reference erroneously.
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^ permalink raw reply [flat|nested] 20+ messages in thread
* bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?)
2020-05-27 11:53 ` Danny Milosavljevic
@ 2020-05-27 17:22 ` Leo Famulari
0 siblings, 0 replies; 20+ messages in thread
From: Leo Famulari @ 2020-05-27 17:22 UTC (permalink / raw)
To: Danny Milosavljevic; +Cc: 41406, Pierre Neidhardt
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On Wed, May 27, 2020 at 01:53:29PM +0200, Danny Milosavljevic wrote:
> Hi Leo,
>
> On Tue, 26 May 2020 12:24:22 -0400
> Leo Famulari <leo@famulari.name> wrote:
>
> > It's probably not worth adding a linter check for this, because everyone
> > should be using the go-build-system for their Go packages, and if it
> > doesn't work, that's a bug in the build system, not in the package
>
> Hmm, but runc--the culprit here--does use go-build-system and still retains
> a go reference erroneously.
Yup, it's a bug!
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2020-05-19 17:27 ` bug#41406: Docker package retains Go references (was Re: Guix closure size of a system?) Leo Famulari
2020-05-19 18:16 ` Danny Milosavljevic
2020-05-19 18:25 ` Leo Famulari
2020-05-19 18:32 ` Danny Milosavljevic
2020-05-19 18:43 ` Julien Lepiller
2020-05-19 19:00 ` Leo Famulari
2020-05-19 19:05 ` Danny Milosavljevic
2020-05-20 6:16 ` Pierre Neidhardt
2020-05-20 16:43 ` Leo Famulari
2020-05-20 17:05 ` Marius Bakke
2020-05-20 18:30 ` Julien Lepiller
2020-05-21 9:41 ` zimoun
2020-05-21 16:20 ` Leo Famulari
2020-05-26 14:17 ` Danny Milosavljevic
2020-05-26 16:24 ` Leo Famulari
2020-05-27 11:53 ` Danny Milosavljevic
2020-05-27 17:22 ` Leo Famulari
2020-05-20 21:09 ` Pierre Neidhardt
2020-05-20 23:01 ` Leo Famulari
2020-05-21 7:02 ` Pierre Neidhardt
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