bug#38055: patchelf: Assertion failed when setting interpreter

[Ivan Vilata i Balaguer <ivan@selidor.net>]

Efraim Flashner (2019-11-05 18:18:22 +0200) wrote:

> On Tue, Nov 05, 2019 at 03:12:23PM +0100, Ludovic Courtès wrote:
> > 
> > Ivan Vilata i Balaguer <ivan@selidor.net> skribis:
> > 
> > > Hi, I'm using patchelf 0.8 from Guix commit 7f81cce3 on Debian Sid.
> > > When trying to patch the `go` binary from
> > > <https://dl.google.com/go/go1.12.3.linux-amd64.tar.gz>, I get the
> > > following error:
> > >
> > >     ivan@sax /tmp/tmps2Cv6w [env]$ patchelf --print-interpreter $SHELL
> > >     /gnu/store/ahqgl4h89xqj695lgqvsaf6zh2nhy4pj-glibc-2.29/lib/ld-linux-x86-64.so.2
> > >     ivan@sax /tmp/tmps2Cv6w [env]$ patchelf --set-interpreter $(patchelf --print-interpreter $SHELL) /tmp/tmps2Cv6w/golang/bin/go
> > >     patchelf: patchelf.cc:701: void ElfFile<Elf_Ehdr, Elf_Phdr, Elf_Shdr, Elf_Addr, Elf_Off, Elf_Dyn, Elf_Sym>::rewriteSectionsExecutable() \
> > >      [with Elf_Ehdr = Elf64_Ehdr; Elf_Phdr = Elf64_Phdr; Elf_Shdr = Elf64_Shdr; Elf_Addr = long unsigned int; Elf_Off = long unsigned int; \
> > >      Elf_Dyn = Elf64_Dyn; Elf_Sym = Elf64_Sym]: Assertion `(off_t) rdi(hdr->e_shoff) >= startOffset' failed.
> > >     Aborted
> > 
> > I think it’s a bug you should report upstream to the PatchELF
> > maintainers; it’s probably not Guix-specific.
> 
> On the other hand, if I were the patchelf maintainers, I'd suggest
> upgrading our package from 0.8 to a newer version.

Yeah, as I mentioned in the original mail that particular problem does indeed
seem to be fixed in 0.10.  However when I try to build that source with `guix
build patchelf --with-source=…`, tests fail.

If I run `guix environment -C --pure patchelf` then unpack and build the
source, the only test that actually fails is `no-rpath.sh`.  If I run `sh -x
no-rpath.sh` I get this:

```
++ basename no-rpath.sh .sh
+ SCRATCH=scratch/no-rpath
+ rm -rf scratch/no-rpath
+ mkdir -p scratch/no-rpath
+ cp no-rpath scratch/no-rpath/
++ ../src/patchelf --print-rpath scratch/no-rpath/no-rpath
+ oldRPath=/gnu/store/ahqgl4h89xqj695lgqvsaf6zh2nhy4pj-glibc-2.29/lib:/gnu/store/2plcy91lypnbbysb18ymnhaw3zwk8pg1-gcc-7.4.0-lib/lib:/gnu/store/2plcy91lypnbbysb18ymnhaw3zwk8pg1-gcc-7.4.0-lib/lib/gcc/x86_64-unknown-linux-gnu/7.4.0/../../..:/gnu/store/dcrwf5irwh39knld1wim1qkny659af9g-profile/lib
+ test -n /gnu/store/ahqgl4h89xqj695lgqvsaf6zh2nhy4pj-glibc-2.29/lib:/gnu/store/2plcy91lypnbbysb18ymnhaw3zwk8pg1-gcc-7.4.0-lib/lib:/gnu/store/2plcy91lypnbbysb18ymnhaw3zwk8pg1-gcc-7.4.0-lib/lib/gcc/x86_64-unknown-linux-gnu/7.4.0/../../..:/gnu/store/dcrwf5irwh39knld1wim1qkny659af9g-profile/lib
+ exit 1
```

To succeed, the output of `…/patchelf --print-rpath …/no-rpath`
(i.e. `oldRPath`) should be empty.  I'm not that familiar with Guix's GNU
build system, but is that at all possible under Guix?  I mean, maybe the test
is pointless or must be altered in some Guix-specific way for the `no-rpath`
binary not to have an rpath.

Cheers,

-- 
Ivan Vilata i Balaguer -- https://elvil.net/