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Mon, 17 Oct 2022 22:03:28 +0000 (UTC) Date: Tue, 18 Oct 2022 00:03:27 +0200 From: Julien Lepiller User-Agent: K-9 Mail for Android In-Reply-To: <87v8oixits.fsf@gmail.com> References: <87v8oixits.fsf@gmail.com> Message-ID: <025A8B84-E6C6-43EC-AAF6-CC93DC2F2BAC@lepiller.eu> MIME-Version: 1.0 Content-Type: multipart/alternative; boundary=----FUXHJCQ8X6GPL9U6WTPO4DF1AT65JT Content-Transfer-Encoding: 7bit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: bug-guix@gnu.org List-Id: Bug reports for GNU Guix List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: bug-guix-bounces+larch=yhetil.org@gnu.org Sender: "bug-Guix" X-Migadu-Flow: FLOW_IN X-Migadu-Country: US ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1666044259; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; 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spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 7.58 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=lepiller.eu header.s=dkim header.b=T4lozXbH; dmarc=fail reason="SPF not aligned (relaxed)" header.from=lepiller.eu (policy=none); spf=pass (aspmx1.migadu.com: domain of "bug-guix-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="bug-guix-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: ECE173EAEA X-Spam-Score: 7.58 X-Migadu-Scanner: scn1.migadu.com X-TUID: J9elj6cb48TO ------FUXHJCQ8X6GPL9U6WTPO4DF1AT65JT Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable You're right, java package don't retain references to there input, that's w= hy we propagate required dependencies (mh=E2=80=A6 sometimes)=2E I don't kn= ow how they could reference dependencies directly=2E Le 17 octobre 2022 23:04:47 GMT+02:00, Maxim Cournoyer a =C3=A9crit=C2=A0: >Hello, > >I'm not a Java expert, but this appears to me problematic: > >--8<---------------cut here---------------start------------->8--- >$ guix build java-commons-dbcp >/gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblvh32-java-commons-dbcp-2=2E6=2E0 > >$ guix gc -R /gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblvh32-java-commons-dbc= p-2=2E6=2E0 >/gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblvh32-java-commons-dbcp-2=2E6=2E0 >--8<---------------cut here---------------end--------------->8--- > >Digging a bit more, peeking into the =2Ejar file, which is a ZIP archive: > >--8<---------------cut here---------------start------------->8--- >$ unzip /gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblvh32-java-commons-dbcp-2= =2E6=2E0/\ >share/java/java-commons-dbcp=2Ejar -d /tmp/java-commons-dbcp=2Ejar > >$ grep -rin CLASSPATH /tmp/java-commons-dbcp=2Ejar >$ grep -rin /gnu/store /tmp/java-commons-dbcp=2Ejar >/tmp/java-commons-dbcp=2Ejar/META-INF/INDEX=2ELIST:3:/gnu/store/jghsa6fmh= 9vjcsmj7wwilk3w6iblvh32-java-commons-dbcp-2=2E6=2E0/share/java/java-commons= -dbcp=2Ejar > >$ cat /tmp/java-commons-dbcp=2Ejar/META-INF/INDEX=2ELIST >JarIndex-Version: 1=2E0 > >/gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblvh32-java-commons-dbcp-2=2E6=2E0/s= hare/java/java-commons-dbcp=2Ejar >org >org/apache >org/apache/commons >org/apache/commons/dbcp2 >org/apache/commons/dbcp2/cpdsadapter >org/apache/commons/dbcp2/datasources >org/apache/commons/dbcp2/managed >--8<---------------cut here---------------end--------------->8--- > >Still, no traces of the other libraries such as 'java-commons-pool' >which should be referenced=2E > >I assume this means grafts doesn't currently work for Java libraries=2E > >--=20 >Thanks, >Maxim > > > ------FUXHJCQ8X6GPL9U6WTPO4DF1AT65JT Content-Type: text/html; charset=utf-8 Content-Transfer-Encoding: quoted-printable You're right, java package don't retain references= to there input, that's why we propagate required dependencies (mh=E2=80=A6= sometimes)=2E I don't know how they could reference dependencies directly= =2E

Le 17 octobre 2022 23:04:47 GMT+02:00= , Maxim Cournoyer <maxim=2Ecournoyer@gmail=2Ecom> a =C3=A9crit=C2=A0:=
Hello,

I'm not a Java expert, bu= t this appears to me problematic:

--8<---------------cut here----= -----------start------------->8---
$ guix build java-commons-dbcp
= /gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblvh32-java-commons-dbcp-2=2E6=2E0
=
$ guix gc -R /gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblvh32-java-commons-d= bcp-2=2E6=2E0
/gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblvh32-java-commons-d= bcp-2=2E6=2E0
--8<---------------cut here---------------end----------= ----->8---

Digging a bit more, peeking into the =2Ejar file, whic= h is a ZIP archive:

--8<---------------cut here---------------sta= rt------------->8---
$ unzip /gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblv= h32-java-commons-dbcp-2=2E6=2E0/\
share/java/java-commons-dbcp=2Ejar -d = /tmp/java-commons-dbcp=2Ejar

$ grep -rin CLASSPATH /tmp/java-commons= -dbcp=2Ejar
$ grep -rin /gnu/store /tmp/java-commons-dbcp=2Ejar
/tmp/= java-commons-dbcp=2Ejar/META-INF/INDEX=2ELIST:3:/gnu/store/jghsa6fmh9vjcsmj= 7wwilk3w6iblvh32-java-commons-dbcp-2=2E6=2E0/share/java/java-commons-dbcp= =2Ejar

$ cat /tmp/java-commons-dbcp=2Ejar/META-INF/INDEX=2ELIST
J= arIndex-Version: 1=2E0

/gnu/store/jghsa6fmh9vjcsmj7wwilk3w6iblvh32-j= ava-commons-dbcp-2=2E6=2E0/share/java/java-commons-dbcp=2Ejar
org
org= /apache
org/apache/commons
org/apache/commons/dbcp2
org/apache/com= mons/dbcp2/cpdsadapter
org/apache/commons/dbcp2/datasources
org/apach= e/commons/dbcp2/managed
--8<---------------cut here---------------end= --------------->8---

Still, no traces of the other libraries such= as 'java-commons-pool'
which should be referenced=2E

I assume th= is means grafts doesn't currently work for Java libraries=2E

--
Thanks,
Maxim



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