The following problem has happened repeatedly, since late emacs 27 and
through emacs 28.1. It happens on this machine and on another machine
running
an older Mac OS (10.14).

When I start up Emacs, things are fine for some time, usually *weeks*.
But then slowly the problem begins and progressively worsens:
commands that are designed to take you to the minibuffer for input
(including switch-buffer, eval-expression, describe-function, ...)
initiate the minibuffer and *immediately* shift the focus to another
window (the top-left-most, curiously) in the frame.  So I start
entering the text and end up typing in a random buffer. As the
problem worsens, it becomes intolerable, and I have to restart
emacs, which I don't like to do.

When this has happened, I have turned off various services like ivy,
without effect. It seems to happen in low level functions like
`(read-from-minibuffer "foo: ")`. The problem continues.

Two other things to note. First, once it starts, it begins to happen
*almost* all the time, but stops temporarily for a few minutes from time
to time. I presume this is in response to some action I have taken, but
I do not know what the common feature of that action is. When the
problem halts, it tends to reassert itself quite quickly.

Second, when it jumps me out of the minibuffer, the minibuffer window
and command stay active. I have to explicitly move back into the
minibuffer to keyboard-quit or to do the command. Curiously, however,
when I switch focus into the minibuffer I have to hit return an extra
time before the original command (e.g., switching buffers) takes effect.
It's almost as if it's implicitly in some recursive layer that needs
to exit. Similarly, I usually have to hit ^G *twice* before it quits.

I've been puzzling over this for a while getting hints here and there
but it seems to be low-enough level that I cannot catch the
transition. (It's happening when calling functions in C-source code.)
I cannot work for weeks in -Q, so I can't really reproduce it
independent of my setup, but there have not been any really notable
changes to my config that I am aware of since this became a problem.
(It is possible, of course.)

Thanks,

  Chris

In GNU Emacs 28.1 (build 2, x86_64-apple-darwin21.6.0, NS appkit-2113.60
Version 12.5 (Build 21G72))
 of 2022-08-15 built on Christophers-MacBook-Pro.local
Windowing system distributor 'Apple', version 10.3.2113
System Description:  macOS 12.6.1

Configured using:
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Configured features:
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Load-path shadows:
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