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* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
@ 2023-11-07 13:11 Sylvain Bougerel
  2023-11-07 15:27 ` Sylvain Bougerel
  2023-11-08  7:51 ` Philip Kaludercic
  0 siblings, 2 replies; 11+ messages in thread
From: Sylvain Bougerel @ 2023-11-07 13:11 UTC (permalink / raw)
  To: 66985

The following issue seem to occur with emacs-29.1 only. Emacs-27.1 and
emacs-28.1 were also tested but do not seem to suffer from the problem.


Issue observed:

Likelihood of error in `package-compute-transaction` form `package.el`,
that could lead to builtin packages being upgraded even if it's not
necessary, due to an edge-case.


Background:

Unfortunately, authors/maintainers of `compat` likely made a
mistake setting its requirements (see:
https://github.com/emacs-compat/compat/blob/main/compat.el#L9):

    ;; Package-Requires: ((emacs "24.4") (seq "2.3"))

`(seq "2.3")` is a version in the future, since `seq.el` is currently at
version 2.24.

After installing this package, however, any package that depend
on `seq` too will result in `package.el` calculating that the built-in `seq`
must also be upgraded (and downloaded) even while, Emacs already has the
latest version (2.24) and when `package-install-upgrade-built-in` is not set.


Steps to reproduce:

This step shows that prior to installing `compat`, only `compat` is
requested:

     shell > [ -d ~/tmp-cache ] && rm -rf ~/tmp-cache
     shell > emacs --no-site-file --batch \
     --eval "(progn \
       (require 'package) \
       (setq package-user-dir \"~/tmp-cache\") \
       (add-to-list 'package-archives '(\"melpa\" .
\"http://melpa.org/packages/\")) \
       (add-to-list 'package-archives '(\"nongnu\" .
\"https://elpa.nongnu.org/nongnu/\")) \
       (package-initialize) \
       (package-refresh-contents) \
       (print (mapcar #'package-desc-name (package-compute-transaction
() (list (list 'compat))))))"
     ...
     (compat)

This step requests the package `git-commit` which depends on `compat`,
*on a fresh install without compat*:

    shell > [ -d ~/tmp-cache ] && rm -rf ~/tmp-cache
    shell > emacs --no-site-file --batch \
    --eval "(progn \
      (require 'package) \
      (setq package-user-dir \"~/tmp-cache\") \
      (add-to-list 'package-archives '(\"melpa\" .
\"http://melpa.org/packages/\")) \
      (add-to-list 'package-archives '(\"nongnu\" .
\"https://elpa.nongnu.org/nongnu/\")) \
      (package-initialize) \
      (package-refresh-contents) \
      (print (mapcar #'package-desc-name (package-compute-transaction
() (list (list 'git-commit))))))"
    ...
    (compat with-editor transient git-commit)

Again, we request the package `git-commit`, but this time, the install
is not "fresh", we install `compat` first.

    shell > [ -d ~/tmp-cache ] && rm -rf ~/tmp-cache
    shell > emacs --no-site-file --batch \
    --eval "(progn \
      (require 'package) \
      (setq package-user-dir \"~/tmp-cache\") \
      (add-to-list 'package-archives '(\"melpa\" .
\"http://melpa.org/packages/\")) \
      (add-to-list 'package-archives '(\"nongnu\" .
\"https://elpa.nongnu.org/nongnu/\")) \
      (package-initialize) \
      (package-refresh-contents) \
      (package-install 'compat) \
      (print (mapcar #'package-desc-name (package-compute-transaction
() (list (list 'git-commit))))))"
    ...
    (with-editor seq transient git-commit)

Here the issue shows itself, `seq` is now requested for installation,
which is incorrect, since Emacs already have the latest version.

Attempting to install `seq` does not install cleanly (See:
https://lists.gnu.org/archive/html/emacs-devel/2023-11/msg00235.html)



My own Emacs version information was included in the bug report, and thus is
kept as-is:


In GNU Emacs 29.1 (build 1, x86_64-pc-linux-gnu, GTK+ Version 3.24.38,
cairo version 1.17.8)
System Description: Arch Linux

Configured using:
 'configure --with-pgtk --with-native-compilation=aot --sysconfdir=/etc
 --prefix=/usr --libexecdir=/usr/lib --with-tree-sitter
 --localstatedir=/var --with-cairo --disable-build-details
 --with-harfbuzz --with-libsystemd --with-modules 'CFLAGS=-march=x86-64
 -mtune=generic -O2 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=2
 -Wformat -Werror=format-security -fstack-clash-protection
 -fcf-protection -g
 -ffile-prefix-map=/build/emacs/src=/usr/src/debug/emacs -flto=auto'
 'LDFLAGS=-Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -flto=auto'
 'CXXFLAGS=-march=x86-64 -mtune=generic -O2 -pipe -fno-plt -fexceptions
 -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security
 -fstack-clash-protection -fcf-protection -Wp,-D_GLIBCXX_ASSERTIONS -g
 -ffile-prefix-map=/build/emacs/src=/usr/src/debug/emacs -flto=auto''

Configured features:
ACL CAIRO DBUS FREETYPE GIF GLIB GMP GNUTLS GPM GSETTINGS HARFBUZZ JPEG
JSON LCMS2 LIBOTF LIBSYSTEMD LIBXML2 MODULES NATIVE_COMP NOTIFY INOTIFY
PDUMPER PGTK PNG RSVG SECCOMP SOUND SQLITE3 THREADS TIFF
TOOLKIT_SCROLL_BARS TREE_SITTER WEBP XIM GTK3 ZLIB

Important settings:
  value of $LC_MONETARY: en_GB.UTF-8
  value of $LC_NUMERIC: en_GB.UTF-8
  value of $LC_TIME: en_GB.UTF-8
  value of $LANG: en_US.UTF-8
  value of $XMODIFIERS: @im=ibus
  locale-coding-system: utf-8-unix

Major mode: Lisp Interaction

Minor modes in effect:
  highlight-quoted-mode: t
  rainbow-delimiters-mode: t
  solaire-global-mode: t
  solaire-mode: t
  persp-mode: t
  org-roam-db-autosync-mode: t
  outline-minor-mode: t
  yas-global-mode: t
  yas-minor-mode: t
  doom-modeline-mode: t
  eros-mode: t
  vi-tilde-fringe-mode: t
  highlight-numbers-mode: t
  display-line-numbers-mode: t
  hl-todo-mode: t
  highlight-indent-guides-mode: t
  copilot-mode: t
  which-key-mode: t
  savehist-mode: t
  better-jumper-mode: t
  better-jumper-local-mode: t
  company-box-mode: t
  global-company-mode: t
  company-mode: t
  vertico-mode: t
  marginalia-mode: t
  volatile-highlights-mode: t
  recentf-mode: t
  save-place-mode: t
  global-so-long-mode: t
  global-git-commit-mode: t
  shell-dirtrack-mode: t
  server-mode: t
  envrc-global-mode: t
  envrc-mode: t
  gcmh-mode: t
  global-hl-line-mode: t
  hl-line-mode: t
  winner-mode: t
  smartparens-global-mode: t
  smartparens-mode: t
  ws-butler-global-mode: t
  ws-butler-mode: t
  global-emojify-mode: t
  emojify-mode: t
  undo-fu-session-global-mode: t
  undo-fu-session-mode: t
  undo-fu-mode: t
  flycheck-popup-tip-mode: t
  global-flycheck-mode: t
  flycheck-mode: t
  repeat-mode: t
  delete-selection-mode: t
  projectile-mode: t
  +popup-mode: t
  global-ligature-mode: t
  ligature-mode: t
  override-global-mode: t
  general-override-mode: t
  apheleia-global-mode: t
  apheleia-mode: t
  global-eldoc-mode: t
  eldoc-mode: t
  show-paren-mode: t
  electric-indent-mode: t
  mouse-wheel-mode: t
  prettify-symbols-mode: t
  file-name-shadow-mode: t
  global-font-lock-mode: t
  font-lock-mode: t
  window-divider-mode: t
  size-indication-mode: t
  column-number-mode: t
  line-number-mode: t
  transient-mark-mode: t
  auto-composition-mode: t
  auto-encryption-mode: t
  auto-compression-mode: t

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^ permalink raw reply	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-07 13:11 bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case) Sylvain Bougerel
@ 2023-11-07 15:27 ` Sylvain Bougerel
  2023-11-08  1:01   ` Sylvain Bougerel
  2023-11-08  7:51 ` Philip Kaludercic
  1 sibling, 1 reply; 11+ messages in thread
From: Sylvain Bougerel @ 2023-11-07 15:27 UTC (permalink / raw)
  To: 66985

I realised I wrote an inaccuracy in the bug report. This does not
change the issue or the outcome of the tests.

> `(seq "2.3")` is a version in the future, since `seq.el` is currently at version 2.24.

This is incorrect for Emacs-29.1, which ships with `seq=2.23`.

> Emacs already has the latest version (2.24) and when `package-install-upgrade-built-in` is not set.

The first half of this statement can be disregarded. However the
second half stands: since `package-install-upgrade-built-in` is not
set, the package should not be upgraded.

Regards,
Sylvain





^ permalink raw reply	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-07 15:27 ` Sylvain Bougerel
@ 2023-11-08  1:01   ` Sylvain Bougerel
  0 siblings, 0 replies; 11+ messages in thread
From: Sylvain Bougerel @ 2023-11-08  1:01 UTC (permalink / raw)
  To: 66985

> > `(seq "2.3")` is a version in the future, since `seq.el` is currently at
> > version 2.24.
>
> This is incorrect for Emacs-29.1, which ships with `seq=2.23`.

Also, seq=2.3 is /not/ a version in the future, it's already met by seq=2.23
provided by Emacs-29.1.





^ permalink raw reply	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-07 13:11 bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case) Sylvain Bougerel
  2023-11-07 15:27 ` Sylvain Bougerel
@ 2023-11-08  7:51 ` Philip Kaludercic
  2023-11-08 16:30   ` Sylvain Bougerel
  1 sibling, 1 reply; 11+ messages in thread
From: Philip Kaludercic @ 2023-11-08  7:51 UTC (permalink / raw)
  To: Sylvain Bougerel; +Cc: 66985

Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> writes:

> The following issue seem to occur with emacs-29.1 only. Emacs-27.1 and
> emacs-28.1 were also tested but do not seem to suffer from the problem.
>
>
> Issue observed:
>
> Likelihood of error in `package-compute-transaction` form `package.el`,
> that could lead to builtin packages being upgraded even if it's not
> necessary, due to an edge-case.
>
>
> Background:
>
> Unfortunately, authors/maintainers of `compat` likely made a
> mistake setting its requirements (see:
> https://github.com/emacs-compat/compat/blob/main/compat.el#L9):
>
>     ;; Package-Requires: ((emacs "24.4") (seq "2.3"))
>
> `(seq "2.3")` is a version in the future, since `seq.el` is currently at
> version 2.24.
>
> After installing this package, however, any package that depend
> on `seq` too will result in `package.el` calculating that the built-in `seq`
> must also be upgraded (and downloaded) even while, Emacs already has the
> latest version (2.24) and when `package-install-upgrade-built-in` is not set.
>
>
> Steps to reproduce:
>
> This step shows that prior to installing `compat`, only `compat` is
> requested:
>
>      shell > [ -d ~/tmp-cache ] && rm -rf ~/tmp-cache
>      shell > emacs --no-site-file --batch \
>      --eval "(progn \
>        (require 'package) \
>        (setq package-user-dir \"~/tmp-cache\") \
>        (add-to-list 'package-archives '(\"melpa\" .
> \"http://melpa.org/packages/\")) \
>        (add-to-list 'package-archives '(\"nongnu\" .
> \"https://elpa.nongnu.org/nongnu/\")) \
>        (package-initialize) \
>        (package-refresh-contents) \
>        (print (mapcar #'package-desc-name (package-compute-transaction
> () (list (list 'compat))))))"
>      ...
>      (compat)
>
> This step requests the package `git-commit` which depends on `compat`,
> *on a fresh install without compat*:
>
>     shell > [ -d ~/tmp-cache ] && rm -rf ~/tmp-cache
>     shell > emacs --no-site-file --batch \
>     --eval "(progn \
>       (require 'package) \
>       (setq package-user-dir \"~/tmp-cache\") \
>       (add-to-list 'package-archives '(\"melpa\" .
> \"http://melpa.org/packages/\")) \
>       (add-to-list 'package-archives '(\"nongnu\" .
> \"https://elpa.nongnu.org/nongnu/\")) \
>       (package-initialize) \
>       (package-refresh-contents) \
>       (print (mapcar #'package-desc-name (package-compute-transaction
> () (list (list 'git-commit))))))"
>     ...
>     (compat with-editor transient git-commit)
>
> Again, we request the package `git-commit`, but this time, the install
> is not "fresh", we install `compat` first.
>
>     shell > [ -d ~/tmp-cache ] && rm -rf ~/tmp-cache
>     shell > emacs --no-site-file --batch \
>     --eval "(progn \
>       (require 'package) \
>       (setq package-user-dir \"~/tmp-cache\") \
>       (add-to-list 'package-archives '(\"melpa\" .
> \"http://melpa.org/packages/\")) \
>       (add-to-list 'package-archives '(\"nongnu\" .
> \"https://elpa.nongnu.org/nongnu/\")) \
>       (package-initialize) \
>       (package-refresh-contents) \
>       (package-install 'compat) \
>       (print (mapcar #'package-desc-name (package-compute-transaction
> () (list (list 'git-commit))))))"
>     ...
>     (with-editor seq transient git-commit)
>
> Here the issue shows itself, `seq` is now requested for installation,
> which is incorrect, since Emacs already have the latest version.

I think we can narrow down the issue to

  (package-installed-p 'seq '(2 3))

being t or nil.  Despite having 2.24 installed on Emacs 30.0, it
indicates that the package is installed.  What does it say when
evaluating this on Emacs 29?

Other values of interest

  (package-installed-p 'seq '(2 0))   ;=> t
  (package-installed-p 'seq '(2 23))  ;=> t
  (package-installed-p 'seq '(2 24))  ;=> t
  (package-installed-p 'seq '(2 25))  ;=> nil
  (package-installed-p 'seq '(2 26))  ;=> nil
  (package-installed-p 'seq '(2 100)) ;=> nil

> Attempting to install `seq` does not install cleanly (See:
> https://lists.gnu.org/archive/html/emacs-devel/2023-11/msg00235.html)
>
>
>
> My own Emacs version information was included in the bug report, and thus is
> kept as-is:
>
>
> In GNU Emacs 29.1 (build 1, x86_64-pc-linux-gnu, GTK+ Version 3.24.38,
> cairo version 1.17.8)
> System Description: Arch Linux
>
> Configured using:
>  'configure --with-pgtk --with-native-compilation=aot --sysconfdir=/etc
>  --prefix=/usr --libexecdir=/usr/lib --with-tree-sitter
>  --localstatedir=/var --with-cairo --disable-build-details
>  --with-harfbuzz --with-libsystemd --with-modules 'CFLAGS=-march=x86-64
>  -mtune=generic -O2 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=2
>  -Wformat -Werror=format-security -fstack-clash-protection
>  -fcf-protection -g
>  -ffile-prefix-map=/build/emacs/src=/usr/src/debug/emacs -flto=auto'
>  'LDFLAGS=-Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -flto=auto'
>  'CXXFLAGS=-march=x86-64 -mtune=generic -O2 -pipe -fno-plt -fexceptions
>  -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security
>  -fstack-clash-protection -fcf-protection -Wp,-D_GLIBCXX_ASSERTIONS -g
>  -ffile-prefix-map=/build/emacs/src=/usr/src/debug/emacs -flto=auto''
>
> Configured features:
> ACL CAIRO DBUS FREETYPE GIF GLIB GMP GNUTLS GPM GSETTINGS HARFBUZZ JPEG
> JSON LCMS2 LIBOTF LIBSYSTEMD LIBXML2 MODULES NATIVE_COMP NOTIFY INOTIFY
> PDUMPER PGTK PNG RSVG SECCOMP SOUND SQLITE3 THREADS TIFF
> TOOLKIT_SCROLL_BARS TREE_SITTER WEBP XIM GTK3 ZLIB
>
> Important settings:
>   value of $LC_MONETARY: en_GB.UTF-8
>   value of $LC_NUMERIC: en_GB.UTF-8
>   value of $LC_TIME: en_GB.UTF-8
>   value of $LANG: en_US.UTF-8
>   value of $XMODIFIERS: @im=ibus
>   locale-coding-system: utf-8-unix
>
> Major mode: Lisp Interaction
>
> Minor modes in effect:
>   highlight-quoted-mode: t
>   rainbow-delimiters-mode: t
>   solaire-global-mode: t
>   solaire-mode: t
>   persp-mode: t
>   org-roam-db-autosync-mode: t
>   outline-minor-mode: t
>   yas-global-mode: t
>   yas-minor-mode: t
>   doom-modeline-mode: t
>   eros-mode: t
>   vi-tilde-fringe-mode: t
>   highlight-numbers-mode: t
>   display-line-numbers-mode: t
>   hl-todo-mode: t
>   highlight-indent-guides-mode: t
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>   which-key-mode: t
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> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/ob-haskell hides
> /usr/share/emacs/29.1/lisp/org/ob-haskell
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/org-macs hides
> /usr/share/emacs/29.1/lisp/org/org-macs
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/ol-gnus hides
> /usr/share/emacs/29.1/lisp/org/ol-gnus
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/org-src hides
> /usr/share/emacs/29.1/lisp/org/org-src
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/ob-gnuplot hides
> /usr/share/emacs/29.1/lisp/org/ob-gnuplot
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/ob-C hides
> /usr/share/emacs/29.1/lisp/org/ob-C
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/ob-lilypond
> hides /usr/share/emacs/29.1/lisp/org/ob-lilypond
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/ox-md hides
> /usr/share/emacs/29.1/lisp/org/ox-md
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/ob-latex hides
> /usr/share/emacs/29.1/lisp/org/ob-latex
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/org-num hides
> /usr/share/emacs/29.1/lisp/org/org-num
> /home/sylvain/.emacs.d/.local/straight/build-29.1/org/ox-latex hides
> /usr/share/emacs/29.1/lisp/org/ox-latex
> /home/sylvain/.emacs.d/.local/straight/build-29.1/eldoc/eldoc hides
> /usr/share/emacs/29.1/lisp/emacs-lisp/eldoc
> /home/sylvain/.emacs.d/.local/straight/build-29.1/map/map hides
> /usr/share/emacs/29.1/lisp/emacs-lisp/map
>
> Features:
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> hashtable-print-readable backquote threads dbusbind inotify
> dynamic-setting system-font-setting font-render-setting cairo gtk pgtk
> lcms2 multi-tty make-network-process native-compile emacs)
>
> Memory information:
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>  (buffers 984 56))





^ permalink raw reply	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-08  7:51 ` Philip Kaludercic
@ 2023-11-08 16:30   ` Sylvain Bougerel
  2023-11-10 17:05     ` Sylvain Bougerel
  0 siblings, 1 reply; 11+ messages in thread
From: Sylvain Bougerel @ 2023-11-08 16:30 UTC (permalink / raw)
  To: Philip Kaludercic; +Cc: 66985

On Wed, Nov 8, 2023 at 3:51 PM Philip Kaludercic <philipk@posteo.net> wrote:
>
> What does it say when evaluating this on Emacs 29?
>
> Other values of interest
>
>   (package-installed-p 'seq '(2 0))   ;=> t
>   (package-installed-p 'seq '(2 23))  ;=> t
>   (package-installed-p 'seq '(2 24))  ;=> t
>   (package-installed-p 'seq '(2 25))  ;=> nil
>   (package-installed-p 'seq '(2 26))  ;=> nil
>   (package-installed-p 'seq '(2 100)) ;=> nil

This is what I got with "GNU Emacs 29.1 (build 1, x86_64-pc-linux-gnu,
GTK+ Version 3.24.38, cairo version 1.17.8)":

    (package-installed-p 'seq '(2 0)) ;=> t
    (package-installed-p 'seq '(2 23)) ;=> t
    (package-installed-p 'seq '(2 24)) ;=> nil
    (package-installed-p 'seq '(2 25)) ;=> nil
    (package-installed-p 'seq '(2 26)) ;=> nil
    (package-installed-p 'seq '(2 100)) ;=> nil


       - Sylvain





^ permalink raw reply	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-08 16:30   ` Sylvain Bougerel
@ 2023-11-10 17:05     ` Sylvain Bougerel
  2023-11-15 13:06       ` Sylvain Bougerel
                         ` (2 more replies)
  0 siblings, 3 replies; 11+ messages in thread
From: Sylvain Bougerel @ 2023-11-10 17:05 UTC (permalink / raw)
  To: Philip Kaludercic; +Cc: 66985

[-- Attachment #1: Type: text/plain, Size: 3758 bytes --]

> Here the issue shows itself, `seq` is now requested for installation,
> which is incorrect, since Emacs already have the latest version.

TL;DR I believe I have found the bug in `package-compute-transaction'.
It misses the
assignment to the newer version of the package that was already in the list of
packages to be installed.


Some details. The following 1-line change fixes it for me (added context around
for readability), in `package-compute-transaction':

       (when already
         (if (version-list-<= next-version (package-desc-version already))
             ;; `next-pkg' is already in `packages', but its position there
             ;; means it might be installed too late: remove it from there, so
             ;; we re-add it (along with its dependencies) at an earlier place
             ;; below (bug#16994).
             (if (memq already seen)     ;Avoid inf-loop on dependency cycles.
                 (message "Dependency cycle going through %S"
                          (package-desc-full-name already))
               (setq packages (delq already packages))
+              (setq next-version (package-desc-version already))
               (setq already nil))
           (error "Need package `%s-%s', but only %s is being installed"
                  next-pkg (package-version-join next-version)
                  (package-version-join (package-desc-version already)))))


The issue occurs in the following scenario:
    - Package A (version a), noted A(a), depends on packages B(z), then C(y)
    - Package C(y) depends on package B(x), which is an _older_
version than B(z)
    - Neither A(a), B(z) nor C(y) are installed (the state of B(x) is
irrelevant)

`package-compute-transaction' will consider first the requirement B(z) and push
it to PACKAGES; then the requirement C(y) is pushed. It will then consider
C(y)'s requirement B(x). Since B is ALREADY seen, it first deletes B(z) from
PACKAGES, expecting to push in front of PACKAGES later, in `cond''s body (so
that B is installed earlier than both A and C). **But it fails to set
NEXT-VERSION to the newer B(z) and retains B(x)'s older version instead.**
That's the edge-case of the bug.

The fix is to set NEXT-VERSION to the version of the equal or newer package,
which is always the one already present in PACKAGE, given the preceding `if'
condition.

In my case, this result in the strange disappearance of `seq' from PACKAGES when
`compat' is not installed, because the older version of `seq' is already
installed and it's enough to meet the requirement of one of the transitive
dependencies of `git-commit', which is `compat'. On the other end, if `compat'
is installed, it's requirements are not checked and thus `seq' remains in the
list.

I provided the format-patch for it in the attachment, but it's the
same single line
of code change as shown above. I have no knowledge on how to submit it other
than by this email, any guidance or direction is appreciated.



Though interestingly, that was actually not the root cause of my personal
problem. I didn't expect `seq' to be installed in the first place, it is
built-in and `package-install-upgrade-built-in' is `nil' on my setup. (I was
expecting to find an issue revolving around this, and stumbled on this one :) )

Do you think I have misunderstood the purpose of
`package-install-upgrade-built-in'? Should the `package-compute-transaction` be
fixed to take it into account? It is not too difficult to do, however I think
this would be a rather impacting change, as users may have gotten used to their
built-in packages dependencies being upgraded without friction, even when they
are built-in.

Looking for another opinion, I lack context on the purpose of
`package-install-upgrade-built-in`.

    - Sylvain

[-- Attachment #2: 0001-Fix-next-version-in-package-compute-transaction-bug-.patch --]
[-- Type: text/x-patch, Size: 992 bytes --]

From c6d40924d1bf3379308bfbef69acbab8e8877c4b Mon Sep 17 00:00:00 2001
From: Sylvain Bougerel <sylvain.bougerel.devel@gmail.com>
Date: Sat, 11 Nov 2023 00:14:41 +0800
Subject: [PATCH] Fix next-version in package-compute-transaction (bug#66985)

---
 lisp/emacs-lisp/package.el | 1 +
 1 file changed, 1 insertion(+)

diff --git a/lisp/emacs-lisp/package.el b/lisp/emacs-lisp/package.el
index e23a61c58a4..a8e263bc074 100644
--- a/lisp/emacs-lisp/package.el
+++ b/lisp/emacs-lisp/package.el
@@ -1908,6 +1908,7 @@ SEEN is used internally to detect infinite recursion."
                 (message "Dependency cycle going through %S"
                          (package-desc-full-name already))
               (setq packages (delq already packages))
+              (setq next-version (package-desc-version already))
               (setq already nil))
           (error "Need package `%s-%s', but only %s is being installed"
                  next-pkg (package-version-join next-version)
-- 
2.42.0


^ permalink raw reply related	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-10 17:05     ` Sylvain Bougerel
@ 2023-11-15 13:06       ` Sylvain Bougerel
  2023-11-15 13:30       ` Eli Zaretskii
  2023-11-16  7:25       ` Philip Kaludercic
  2 siblings, 0 replies; 11+ messages in thread
From: Sylvain Bougerel @ 2023-11-15 13:06 UTC (permalink / raw)
  To: Philip Kaludercic; +Cc: 66985

On Sat, Nov 11, 2023 at 1:05 AM Sylvain Bougerel
<sylvain.bougerel.devel@gmail.com> wrote:
> The issue occurs in the following scenario:
>     - Package A (version a), noted A(a), depends on packages B(z), then C(y)
>     - Package C(y) depends on package B(x), which is an _older_
> version than B(z)
>     - Neither A(a), B(z) nor C(y) are installed (the state of B(x) is
> irrelevant)
>

With a bit of time (est: a week or two), I can write a unit test and
make a patch with a better commit description that follows current
guidelines. Maybe the unit test will highlight the problem better? Let
me know if that will be appropriate/appreciated. My idea for the unit
test is to show that the sequence in which requirements are enumerated
should not have an effect on the resulting transaction, while it does
at the moment (in the specific case presented below - which is the
case I will test for).

      - Sylvain





^ permalink raw reply	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-10 17:05     ` Sylvain Bougerel
  2023-11-15 13:06       ` Sylvain Bougerel
@ 2023-11-15 13:30       ` Eli Zaretskii
  2023-11-16  7:25       ` Philip Kaludercic
  2 siblings, 0 replies; 11+ messages in thread
From: Eli Zaretskii @ 2023-11-15 13:30 UTC (permalink / raw)
  To: Sylvain Bougerel; +Cc: philipk, 66985

> Cc: 66985@debbugs.gnu.org
> From: Sylvain Bougerel <sylvain.bougerel.devel@gmail.com>
> Date: Sat, 11 Nov 2023 01:05:45 +0800
> 
> > Here the issue shows itself, `seq` is now requested for installation,
> > which is incorrect, since Emacs already have the latest version.
> 
> TL;DR I believe I have found the bug in `package-compute-transaction'.
> It misses the
> assignment to the newer version of the package that was already in the list of
> packages to be installed.

Philip, any comments or suggestions?





^ permalink raw reply	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-10 17:05     ` Sylvain Bougerel
  2023-11-15 13:06       ` Sylvain Bougerel
  2023-11-15 13:30       ` Eli Zaretskii
@ 2023-11-16  7:25       ` Philip Kaludercic
  2023-11-17  9:37         ` Sylvain Bougerel
  2 siblings, 1 reply; 11+ messages in thread
From: Philip Kaludercic @ 2023-11-16  7:25 UTC (permalink / raw)
  To: Sylvain Bougerel; +Cc: 66985

Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> writes:

>> Here the issue shows itself, `seq` is now requested for installation,
>> which is incorrect, since Emacs already have the latest version.
>
> TL;DR I believe I have found the bug in `package-compute-transaction'.
> It misses the
> assignment to the newer version of the package that was already in the list of
> packages to be installed.
>
>
> Some details. The following 1-line change fixes it for me (added context around
> for readability), in `package-compute-transaction':
>
>        (when already
>          (if (version-list-<= next-version (package-desc-version already))
>              ;; `next-pkg' is already in `packages', but its position there
>              ;; means it might be installed too late: remove it from there, so
>              ;; we re-add it (along with its dependencies) at an earlier place
>              ;; below (bug#16994).
>              (if (memq already seen)     ;Avoid inf-loop on dependency cycles.
>                  (message "Dependency cycle going through %S"
>                           (package-desc-full-name already))
>                (setq packages (delq already packages))
> +              (setq next-version (package-desc-version already))
>                (setq already nil))
>            (error "Need package `%s-%s', but only %s is being installed"
>                   next-pkg (package-version-join next-version)
>                   (package-version-join (package-desc-version already)))))
>
>
> The issue occurs in the following scenario:
>     - Package A (version a), noted A(a), depends on packages B(z), then C(y)
>     - Package C(y) depends on package B(x), which is an _older_
> version than B(z)
>     - Neither A(a), B(z) nor C(y) are installed (the state of B(x) is
> irrelevant)
>
> `package-compute-transaction' will consider first the requirement B(z) and push
> it to PACKAGES; then the requirement C(y) is pushed. It will then consider
> C(y)'s requirement B(x). Since B is ALREADY seen, it first deletes B(z) from
> PACKAGES, expecting to push in front of PACKAGES later, in `cond''s body (so
> that B is installed earlier than both A and C). **But it fails to set
> NEXT-VERSION to the newer B(z) and retains B(x)'s older version instead.**
> That's the edge-case of the bug.
>
> The fix is to set NEXT-VERSION to the version of the equal or newer package,
> which is always the one already present in PACKAGE, given the preceding `if'
> condition.

This certainly makes sense, one just has to make sure that there aren't
any other edge-cases being broken by this change :/  I'll apply the
patch locally and test it over the next few days.

> In my case, this result in the strange disappearance of `seq' from PACKAGES when
> `compat' is not installed, because the older version of `seq' is already
> installed and it's enough to meet the requirement of one of the transitive
> dependencies of `git-commit', which is `compat'. On the other end, if `compat'
> is installed, it's requirements are not checked and thus `seq' remains in the
> list.
>
> I provided the format-patch for it in the attachment, but it's the
> same single line
> of code change as shown above. I have no knowledge on how to submit it other
> than by this email, any guidance or direction is appreciated.

A short commit like this can be manually applied, and attributed to you,
otherwise you should consult the CONTRIBUTING file in emacs.git for
notes on how to format a patch and the commit message.

> Though interestingly, that was actually not the root cause of my personal
> problem. I didn't expect `seq' to be installed in the first place, it is
> built-in and `package-install-upgrade-built-in' is `nil' on my setup. (I was
> expecting to find an issue revolving around this, and stumbled on this one :) )

> Do you think I have misunderstood the purpose of
> `package-install-upgrade-built-in'? Should the `package-compute-transaction` be
> fixed to take it into account? It is not too difficult to do, however I think
> this would be a rather impacting change, as users may have gotten used to their
> built-in packages dependencies being upgraded without friction, even when they
> are built-in.

That user option shouldn't affect this issue, it was added so that
package-install could install a newer version of a built-in package from
ELPA, but that doesn't affect dependencies IIRC.

> Looking for another opinion, I lack context on the purpose of
> `package-install-upgrade-built-in`.

If you are really interested, you can take a look at bug#62720.

>     - Sylvain

Eli Zaretskii <eliz@gnu.org> writes:

>> Cc: 66985@debbugs.gnu.org
>> From: Sylvain Bougerel <sylvain.bougerel.devel@gmail.com>
>> Date: Sat, 11 Nov 2023 01:05:45 +0800
>> 
>> > Here the issue shows itself, `seq` is now requested for installation,
>> > which is incorrect, since Emacs already have the latest version.
>> 
>> TL;DR I believe I have found the bug in `package-compute-transaction'.
>> It misses the
>> assignment to the newer version of the package that was already in the list of
>> packages to be installed.
>
> Philip, any comments or suggestions?

Nothing special, other than that I had been planning to re-write the
function anyway, to make it simpler and re-usable by package-vc.





^ permalink raw reply	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-16  7:25       ` Philip Kaludercic
@ 2023-11-17  9:37         ` Sylvain Bougerel
  2023-11-27 17:18           ` Philip Kaludercic
  0 siblings, 1 reply; 11+ messages in thread
From: Sylvain Bougerel @ 2023-11-17  9:37 UTC (permalink / raw)
  To: Philip Kaludercic; +Cc: 66985

On Thu, Nov 16, 2023 at 3:25 PM Philip Kaludercic <philipk@posteo.net> wrote:
> A short commit like this can be manually applied, and attributed to you,
> otherwise you should consult the CONTRIBUTING file in emacs.git for
> notes on how to format a patch and the commit message.

Thanks Philip, I'll read it for future reference. Feel free to make
the change as you see fit (as for attribution: this email chain is
enough)

> If you are really interested, you can take a look at bug#62720.

Thanks, I got the background now. I don't think it's necessary to go
further then.

>
> Nothing special, other than that I had been planning to re-write the
> function anyway, to make it simpler and re-usable by package-vc.

Let me know if you intend to maintain the same interface for
package-compute-transaction, in this case I can contribute a unit
test.





^ permalink raw reply	[flat|nested] 11+ messages in thread

* bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)
  2023-11-17  9:37         ` Sylvain Bougerel
@ 2023-11-27 17:18           ` Philip Kaludercic
  0 siblings, 0 replies; 11+ messages in thread
From: Philip Kaludercic @ 2023-11-27 17:18 UTC (permalink / raw)
  To: Sylvain Bougerel; +Cc: 66985

Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> writes:

> On Thu, Nov 16, 2023 at 3:25 PM Philip Kaludercic <philipk@posteo.net> wrote:
>> A short commit like this can be manually applied, and attributed to you,
>> otherwise you should consult the CONTRIBUTING file in emacs.git for
>> notes on how to format a patch and the commit message.
>
> Thanks Philip, I'll read it for future reference. Feel free to make
> the change as you see fit (as for attribution: this email chain is
> enough)
>
>> If you are really interested, you can take a look at bug#62720.
>
> Thanks, I got the background now. I don't think it's necessary to go
> further then.

1+

>>
>> Nothing special, other than that I had been planning to re-write the
>> function anyway, to make it simpler and re-usable by package-vc.
>
> Let me know if you intend to maintain the same interface for
> package-compute-transaction, in this case I can contribute a unit
> test.

I'd prefer to change the interface in the future, because part of the
confusion is precisely the confusing recursion.





^ permalink raw reply	[flat|nested] 11+ messages in thread

end of thread, other threads:[~2023-11-27 17:18 UTC | newest]

Thread overview: 11+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2023-11-07 13:11 bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case) Sylvain Bougerel
2023-11-07 15:27 ` Sylvain Bougerel
2023-11-08  1:01   ` Sylvain Bougerel
2023-11-08  7:51 ` Philip Kaludercic
2023-11-08 16:30   ` Sylvain Bougerel
2023-11-10 17:05     ` Sylvain Bougerel
2023-11-15 13:06       ` Sylvain Bougerel
2023-11-15 13:30       ` Eli Zaretskii
2023-11-16  7:25       ` Philip Kaludercic
2023-11-17  9:37         ` Sylvain Bougerel
2023-11-27 17:18           ` Philip Kaludercic

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