* Subject: [BUG] error when visit bibtex file link [9.5 (9.5-gd4e192 @ c:/Users/scott/.emacs.d/straight/build/org/)]
@ 2021-11-07 2:25 Scott Otterson
2021-11-07 4:43 ` Ihor Radchenko
0 siblings, 1 reply; 2+ messages in thread
From: Scott Otterson @ 2021-11-07 2:25 UTC (permalink / raw)
To: Emacs-orgmode@gnu.org
[-- Attachment #1: Type: text/plain, Size: 37567 bytes --]
When I type C-c o on a bibtex file link like this:
[[file:energy.bib::Dubitzky07datMinGenBook][Dubitzky et al. 2007:
Fundamentals]]
I get the error message shown below:
=== *Warnings* ================================================
Warning (emacs): org-element--cache: Cache corruption detected in
energy.bib. Resetting.
The error was: (error "rx ‘repeat’ range error")
Please report this to Org mode mailing list (M-x org-submit-bug-report).
=== End *Warnings* =============================================
Emacs : GNU Emacs 27.2 (build 1, x86_64-w64-mingw32)
of 2021-03-26
Package: Org mode version 9.5 (9.5-gd4e192 @
c:/Users/scott/.emacs.d/straight/build/org/)
current state:
==============
(setq
org-src-mode-hook '(org-src-babel-configure-edit-buffer
org-src-mode-configure-edit-buffer)
org-capture-prepare-finalize-hook '(org-roam-capture--install-finalize-h)
org-link-shell-confirm-function 'yes-or-no-p
org-metadown-hook '(org-babel-pop-to-session-maybe)
org-appear-autoentities t
org-roam-db-node-include-function #[0 "\300\207" [t] 1]
org-table-header-line-p t
org-refile-targets '((nil :maxlevel . 6))
org-html-format-inlinetask-function
'org-html-format-inlinetask-default-function
org-noter-auto-save-last-location t
org-odt-format-headline-function 'org-odt-format-headline-default-function
org-latex-pdf-process '("latexmk -pdf -output-directory=%o -f %f")
org-download-annotate-function 'org-download-annotate-default
org-persist-before-write-hook '(org-element--cache-persist-before-write)
org-agenda-files '("c:/Users/scott/OneDrive/share/proj/roadmapFrcst/
forecast_roadmap.org" "c:/Users/scott/OneDrivef/energytop.org"
"c:/Users/scott/OneDrive/ref/DOE_brainstorm/20200605152244-test0.org"
"c:/Users/scott/OneDrive/ref/tmp.org")
org-ascii-format-inlinetask-function 'org-ascii-format-inlinetask-default
org-modules '(ol-bibtex ol-info org-inlinetask org-mouse ol-eshell ol-man
org-mouse org-protocol)
org-cycle-include-plain-lists 'integrate
org-mode-hook '(#[0
"\305\x10\306 >\203\x14\0\307\n\310\311#\210\307
\312\313#\210\307 \314\315#\210\306
>\203,\0\307\n\316\317#\210\307\n\320\321#\210\322 >\203>\0\307
\323\324#\210\307 \325\324#\210\326
>\203P\0\307\n\327\317#\210\307\n\330\321#\210\331
>\203_\0\332\311\f\333BC\334#\210\335 >\203k\0\332\311\336\334#\210\337
>\203w\0\332\311\340\334#\210\341\342\343\344\311$\210\345\342\311\"\210\342\207"
[org-mouse-context-menu-function
org-mouse-features
org-mouse-map
org-mode-map
org-outline-regexp
org-mouse-context-menu
context-menu
org-defkey
[mouse-3]
nil
[mouse-3]
org-mouse-show-context-menu
[down-mouse-1]
org-mouse-down-mouse
[C-drag-mouse-1]
org-mouse-move-tree
[C-down-mouse-1]
org-mouse-move-tree-start
yank-link
[S-mouse-2]
org-mouse-yank-link
[drag-mouse-3]
move-tree
[drag-mouse-3]
[down-mouse-3]
activate-stars
font-lock-add-keywords
(0
`(face org-link mouse-face highlight keymap
,org-mouse-map)
'prepend)
t
activate-bullets
(("^[ ]*\\([-+*]\\|[0-9]+[.)]\\) +"
(1
`(face org-link keymap ,org-mouse-map mouse-face
highlight)
'prepend)
)
)
activate-checkboxes
(("^[ ]*\\(?:[-+*]\\|[0-9]+[.)]\\)[
]+\\(?:\\[@\\(?:start:\\)?[0-9]+\\][ ]*\\)?\\(\\[[- X]\\]\\)"
(1
`(face nil keymap ,org-mouse-map mouse-face
highlight)
prepend)
)
)
ad-add-advice
org-open-at-point
(org-mouse-open-at-point
nil
t
(advice
lambda
nil
(let
((context
(org-context)
)
)
(cond
((assq :headline-stars context)
(org-cycle)
)
((assq :checkbox context)
(org-toggle-checkbox)
)
((assq :item-bullet context)
(let
((org-cycle-include-plain-lists t)
)
(org-cycle)
)
)
((org-footnote-at-reference-p)
nil)
(t ad-do-it)
)
)
)
)
around ad-activate]
5]
wrap-region-mode org-superstar-mode
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-show-all append
local]
5]
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook
org-babel-show-result-all
append local]
5]
org-babel-result-hide-spec org-babel-hide-all-hashes
org-autolist-mode org-appear-mode)
org-yank-adjusted-subtrees t
org-odt-format-drawer-function #[514 "\207" [] 3 "\n\n(fn NAME CONTENTS)"]
org-outline-path-complete-in-steps nil
org-archive-hook '(org-attach-archive-delete-maybe)
org-roam-capture-new-node-hook '(org-roam-protocol--insert-captured-ref-h)
org-persist-before-read-hook '(org-element--cache-persist-before-read)
org-superstar-headline-bullets-list '("●" "￭" "￮" "►" "•" "□" "▸" "▫" "▹")
org-confirm-elisp-link-function 'yes-or-no-p
org-noter-doc-property-in-notes t
org-download-file-format-function 'org-download-file-format-default
org-appear-autolinks t
org-agenda-before-write-hook '(org-agenda-add-entry-text)
org-metaup-hook '(org-babel-load-in-session-maybe)
org-noter-notes-search-path
'("c:/Users/scott/OneDrive/share/ref/DOE_brainstorm/org-notes")
org-persist-after-read-hook '(org-element--cache-persist-after-read)
org-bibtex-headline-format-function #[257 "\300\x01\236A\207" [:title] 3
"\n\n(fn ENTRY)"]
org-download-method 'org-download-method-dirname-from-orgfile
org-latex-format-drawer-function #[514 "\207" [] 3 "\n\n(fn _ CONTENTS)"]
org-babel-pre-tangle-hook '(save-buffer)
org-file-apps '(("\\.docx\\'" . default) ("\\.mm\\'" . default)
("\\.x?html?\\'" . default) ("\\.pdf\\'" . default)
(auto-mode . emacs))
org-tab-first-hook '(org-babel-hide-result-toggle-maybe
org-babel-header-arg-expand)
org-export-with-broken-links 'mark
org-hide-leading-stars t
org-roam-capture-preface-hook '(org-roam-dailies--override-capture-time-h
org-roam-protocol--try-capture-to-ref-h)
org-hide-emphasis-markers t
org-export-backends '(ascii html latex odt org)
org-roam-completion-everywhere t
org-font-lock-hook '(org-inlinetask-fontify)
org-startup-align-all-tables t
org-ascii-format-drawer-function #[771 "\x01\207" [] 4 "\n\n(fn NAME CONTENTS
WIDTH)"]
org-ellipsis "…"
org-superstar-todo-bullet-alist '(("TODO" . 9646) ("DONE" . 9647))
org-agenda-loop-over-headlines-in-active-region nil
org-occur-case-fold-search ''smart
org-roam-find-file-hook '(org-roam-buffer--setup-redisplay-h
org-roam--register-completion-functions-h
org-roam--replace-roam-links-on-save-h
org-roam-open-id-with-org-roam-db-h
org-roam-db-autosync--setup-update-on-save-h)
org-appear-autokeywords t
org-occur-hook '(org-first-headline-recenter)
org-agenda-mode-hook '(#[0
"\302\x10\303 \304\305#\210\303 \306\307#\210\303
\310\311#\210\303 \312\313#\210\303 \314\315#\207"
[org-mouse-context-menu-function
org-agenda-mode-map
org-mouse-agenda-context-menu
org-defkey
[mouse-3]
org-mouse-show-context-menu
[down-mouse-3]
org-mouse-move-tree-start
[C-mouse-4]
org-agenda-earlier
[C-mouse-5]
org-agenda-later
[drag-mouse-3]
#[257
"\300\x01!\211\301\267\202\x15\0\302\303!\202\x16\0\304\303!\202\x16\0\305\207"
[org-mouse-get-gesture
#s
(hash-table
size
2
test
eq
rehash-size
1.5
rehash-threshold
0.8125
purecopy
t
data
(:left 9 :right 15)
)
org-agenda-earlier 1 org-agenda-later nil]
4 "\n\n(fn EVENT)" "e"]
]
4]
)
outline-minor-mode-hook '(outshine--outline-minor-mode-hook outshine-mode)
org-noter-notes-window-location 'other-frame
org-protocol-protocol-alist '(("org-roam-node" :protocol "roam-node"
:function org-roam-protocol-open-node)
("org-roam-ref" :protocol "roam-ref"
:function
org-roam-protocol-open-ref)
)
org-noter-hide-other nil
org-appear-autosubmarkers t
org-odd-levels-only t
org-pandoc-options-for-docx '((standalone))
org-cycle-hook '(org-inlinetask-hide-tasks org-cycle-hide-archived-subtrees
org-cycle-hide-drawers org-cycle-show-empty-lines
org-optimize-window-after-visibility-change)
org-speed-command-hook '(org-speed-command-activate
org-babel-speed-command-activate)
org-roam-node-annotation-function 'org-roam-node-read--annotation
org-id-method 'ts
org-roam-ui-browser-function 'browse-url
org-odt-format-inlinetask-function
'org-odt-format-inlinetask-default-function
org-roam-ref-annotation-function 'org-roam-ref-read--annotation
org-roam-dailies-directory "c:/Users/scott/tmp/daily"
org-appear-delay 1
org-export-before-parsing-hook '(org-attach-expand-links)
org-font-lock-set-keywords-hook '(org-hidden-links-hook-function)
org-confirm-shell-link-function 'yes-or-no-p
org-link-parameters '(("roam" :follow org-roam-link-follow-link)
("man" :follow org-man-open :export org-man-export
:store org-man-store-link)
("eshell" :follow org-eshell-open :store
org-eshell-store-link)
("info" :follow org-info-open :export org-info-export
:store org-info-store-link)
("bibtex" :follow org-bibtex-open :store
org-bibtex-store-link)
("zotero" :follow
(lambda (zpath)
(browse-url (format "zotero:%s" zpath)))
)
("attachment" :follow org-attach-follow :complete
org-attach-complete-link)
("id" :follow org-id-open) ("file+sys")
("file+emacs")
("shell" :follow org-link--open-shell)
("news" :follow
#[514 "\301\300\302\x04Q\x02\"\207"
["news" browse-url ":"] 6 "\n\n(fn URL ARG)"]
)
("mailto" :follow
#[514 "\301\300\302\x04Q\x02\"\207"
["mailto" browse-url ":"] 6 "\n\n(fn URL ARG)"]
)
("https" :follow
#[514 "\301\300\302\x04Q\x02\"\207"
["https" browse-url ":"] 6 "\n\n(fn URL ARG)"]
)
("http" :follow
#[514 "\301\300\302\x04Q\x02\"\207"
["http" browse-url ":"] 6 "\n\n(fn URL ARG)"]
)
("ftp" :follow
#[514 "\301\300\302\x04Q\x02\"\207" ["ftp" browse-url ":"]
6 "\n\n(fn URL ARG)"]
)
("help" :follow org-link--open-help :store
org-link--store-help)
("file" :complete org-link-complete-file)
("elisp" :follow org-link--open-elisp))
org-noter-always-create-frame nil
org-latex-format-headline-function
'org-latex-format-headline-default-function
org-link-elisp-confirm-function 'yes-or-no-p
org-roam-db-autosync-mode t
org-latex-format-inlinetask-function
'org-latex-format-inlinetask-default-function
org-html-format-drawer-function #[514 "\207" [] 3 "\n\n(fn NAME CONTENTS)"]
org-superstar-special-todo-items t
org-superstar-cycle-headline-bullets nil
org-roam-directory "c:/Users/scott/tmp"
org-html-format-headline-function
'org-html-format-headline-default-function
org-superstar-item-bullet-alist '((42 . 10043) (43 . 10011) (45 . 9644))
org-directory "c:/Users/scott/OneDrive/share/ref/DOE_brainstorm/org-notes"
org-download-link-format-function
'org-download-link-format-function-default
org-link-from-user-regexp nil
org-use-speed-commands t
org-download-abbreviate-filename-function 'file-relative-name
org-ctrl-k-protect-subtree 'error
org-list-allow-alphabetical t
)
[-- Attachment #2: Type: text/html, Size: 1186740 bytes --]
^ permalink raw reply [flat|nested] 2+ messages in thread* Re: Subject: [BUG] error when visit bibtex file link [9.5 (9.5-gd4e192 @ c:/Users/scott/.emacs.d/straight/build/org/)]
2021-11-07 2:25 Subject: [BUG] error when visit bibtex file link [9.5 (9.5-gd4e192 @ c:/Users/scott/.emacs.d/straight/build/org/)] Scott Otterson
@ 2021-11-07 4:43 ` Ihor Radchenko
0 siblings, 0 replies; 2+ messages in thread
From: Ihor Radchenko @ 2021-11-07 4:43 UTC (permalink / raw)
To: Scott Otterson; +Cc: Emacs-orgmode@gnu.org
Scott Otterson <scotto@sharpleaf.org> writes:
> When I type C-c o on a bibtex file link like this:
>
> [[file:energy.bib::Dubitzky07datMinGenBook][Dubitzky et al. 2007:
> Fundamentals]]
>
> I get the error message shown below:
>
> === *Warnings* ================================================
>
> Warning (emacs): org-element--cache: Cache corruption detected in
> energy.bib. Resetting.
> The error was: (error "rx ‘repeat’ range error")
I cannot reproduce. It looks like something is calling
org-element-at-point inside bibtex buffer. Do you have any adviced Org
functions?
Also, if you update to latest main, the warning should provide more
information for debugging.
Best,
Ihor
^ permalink raw reply [flat|nested] 2+ messages in threadend of thread, other threads:[~2021-11-07 4:42 UTC | newest] Thread overview: 2+ messages (download: mbox.gz follow: Atom feed -- links below jump to the message on this page -- 2021-11-07 2:25 Subject: [BUG] error when visit bibtex file link [9.5 (9.5-gd4e192 @ c:/Users/scott/.emacs.d/straight/build/org/)] Scott Otterson 2021-11-07 4:43 ` Ihor Radchenko
Code repositories for project(s) associated with this external index https://git.savannah.gnu.org/cgit/emacs.git https://git.savannah.gnu.org/cgit/emacs/org-mode.git This is an external index of several public inboxes, see mirroring instructions on how to clone and mirror all data and code used by this external index.