* [BUG] Cache corruption [9.6 (9.6-??-27edae8 @ /Users/apc/.emacs.d/.local/straight/build-28.0.90/org/)]
@ 2021-12-14 18:50 Alejandro Pérez Carballo
2021-12-15 10:59 ` Ihor Radchenko
0 siblings, 1 reply; 2+ messages in thread
From: Alejandro Pérez Carballo @ 2021-12-14 18:50 UTC (permalink / raw)
To: emacs-orgmode
Remember to cover the basics, that is, what you expected to happen and
what in fact did happen. You don't know how to make a good report? See
https://orgmode.org/manual/Feedback.html#Feedback
Your bug report will be posted to the Org mailing list.
------------------------------------------------------------------------
I was simply navigating an org file after installing emacs 28 and doom.
I got the message below and was asked to submit. So here I am.
Emacs : GNU Emacs 28.0.90 (build 1, x86_64-apple-darwin19.6.0, NS appkit-1894.60 Version 10.15.7 (Build 19H1419))
of 2021-12-14
Package: Org mode version 9.6 (9.6-??-27edae8 @ /Users/apc/.emacs.d/.local/straight/build-28.0.90/org/)
current state:
==============
(setq
org-link-elisp-confirm-function nil
org-directory "~/org/"
org-cite-insert-processor 'citar
org-after-refile-insert-hook '(save-buffer)
org-indirect-buffer-display 'current-window
org-crypt-key nil
org-bibtex-headline-format-function #[257 "\300\236A\207" [:title] 3 "\n\n(fn ENTRY)"]
org-load-hook '(+org-init-org-directory-h +org-init-appearance-h +org-init-agenda-h +org-init-attachments-h +org-init-babel-h
+org-init-babel-lazy-loader-h +org-init-capture-defaults-h +org-init-capture-frame-h +org-init-custom-links-h +org-init-export-h
+org-init-habit-h +org-init-hacks-h +org-init-keybinds-h +org-init-popup-rules-h +org-init-protocol-h
+org-init-protocol-lazy-loader-h +org-init-smartparens-h)
org-startup-folded nil
org-babel-after-execute-hook '(org-redisplay-inline-images)
org-link-abbrev-alist '(("doom-repo" . "https://github.com/hlissner/doom-emacs/%s") ("wolfram" . "https://wolframalpha.com/input/?i=%s")
("wikipedia" . "https://en.wikipedia.org/wiki/%s") ("duckduckgo" . "https://duckduckgo.com/?q=%s")
("gmap" . "https://maps.google.com/maps?q=%s") ("gimages" . "https://google.com/images?q=%s")
("google" . "https://google.com/search?q=") ("youtube" . "https://youtube.com/watch?v=%s")
("github" . "https://github.com/%s"))
org-agenda-files '("~/org/")
org-capture-templates '(("t" "Personal todo" entry (file+headline +org-capture-todo-file "Inbox") "* [ ] %?\n%i\n%a" :prepend t)
("n" "Personal notes" entry (file+headline +org-capture-notes-file "Inbox") "* %u %?\n%i\n%a" :prepend t)
("j" "Journal" entry (file+olp+datetree +org-capture-journal-file) "* %U %?\n%i\n%a" :prepend t)
("p" "Templates for projects")
("pt" "Project-local todo" entry (file+headline +org-capture-project-todo-file "Inbox") "* TODO %?\n%i\n%a" :prepend t)
("pn" "Project-local notes" entry (file+headline +org-capture-project-notes-file "Inbox") "* %U %?\n%i\n%a" :prepend t)
("pc" "Project-local changelog" entry (file+headline +org-capture-project-changelog-file "Unreleased") "* %U %?\n%i\n%a"
:prepend t)
("o" "Centralized templates for projects")
("ot" "Project todo" entry #'+org-capture-central-project-todo-file "* TODO %?\n %i\n %a" :heading "Tasks" :prepend nil)
("on" "Project notes" entry #'+org-capture-central-project-notes-file "* %U %?\n %i\n %a" :heading "Notes" :prepend t)
("oc" "Project changelog" entry #'+org-capture-central-project-changelog-file "* %U %?\n %i\n %a" :heading "Changelog"
:prepend t)
)
org-persist-after-read-hook '(org-element--cache-persist-after-read)
org-format-latex-options '(:foreground default :background default :scale 1.5 :html-foreground "Black" :html-background "Transparent" :html-scale
1.0 :matchers ("begin" "$1" "$" "$$" "\\(" "\\["))
org-refile-targets '((nil :maxlevel . 3) (org-agenda-files :maxlevel . 3))
org-export-before-parsing-hook '(org-attach-expand-links)
org-default-notes-file "/Users/apc/org/notes.org"
org-refile-use-outline-path 'file
org-archive-hook '(org-attach-archive-delete-maybe)
org-cite-follow-processor 'citar
org-file-apps '((remote . emacs) (auto-mode . emacs) (directory . emacs) ("\\.mm\\'" . default) ("\\.x?html?\\'" . default)
("\\.pdf\\'" . default))
org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers org-cycle-show-empty-lines org-optimize-window-after-visibility-change)
org-catch-invisible-edits 'smart
org-persist-before-read-hook '(org-element--cache-persist-before-read)
org-font-lock-set-keywords-hook '(doom-themes-enable-org-fontification)
org-modules '(ol-bibtex)
org-image-actual-width nil
org-attach-use-inheritance t
org-mode-local-vars-hook '(+org-init-gifs-h eldoc-mode)
org-mode-hook '((closure ((hook . org-mode-hook) (--dolist-tail--) t) (&rest _) (add-hook 'before-save-hook 'org-encrypt-entries nil t))
(closure ((hook . org-mode-hook) (--dolist-tail--) t) (&rest _) (add-hook 'before-save-hook 'org-encrypt-entries nil t))
(closure ((hook . org-mode-hook) (--dolist-tail--) t) (&rest _) (add-hook 'before-save-hook 'org-encrypt-entries nil t))
+lookup--init-org-mode-handlers-h
(closure ((hook . org-mode-hook) (--dolist-tail--) t) (&rest _) (add-hook 'before-save-hook 'org-encrypt-entries nil t))
#[0 "\300\301\302\303\304$\207" [add-hook change-major-mode-hook org-show-all append local] 5]
#[0 "\300\301\302\303\304$\207" [add-hook change-major-mode-hook org-babel-show-result-all append local] 5]
org-babel-result-hide-spec org-babel-hide-all-hashes #[0 "\301\211\207" [imenu-create-index-function org-imenu-get-tree] 2]
doom-disable-show-paren-mode-h doom-disable-show-trailing-whitespace-h +org-enable-auto-reformat-tables-h
+org-enable-auto-update-cookies-h +org-make-last-point-visible-h toc-org-enable flyspell-mode org-eldoc-load)
org-src-window-setup 'other-window
org-id-locations-file "/Users/apc/org/.orgids"
org-agenda-span 10
org-priority-faces '((65 . error) (66 . warning) (67 . success))
org-confirm-shell-link-function 'yes-or-no-p
org-reveal-start-hook '(org-decrypt-entry)
org-agenda-skip-unavailable-files t
outline-isearch-open-invisible-function 'outline-isearch-open-invisible
org-use-sub-superscripts '{}
org-startup-indented t
org-agenda-mode-hook '(+org-habit-resize-graph-h)
org-link-translation-function 'toc-org-unhrefify
org-agenda-before-write-hook '(org-agenda-add-entry-text)
org-src-preserve-indentation t
org-entities-user '(("flat" "\\flat" nil "" "" "266D" "♭") ("sharp" "\\sharp" nil "" "" "266F" "♯"))
org-src-mode-hook '(org-src-babel-configure-edit-buffer org-src-mode-configure-edit-buffer)
org-agenda-window-setup 'current-window
org-tags-exclude-from-inheritance '("crypt")
org-clock-out-remove-zero-time-clocks t
org-cite-activate-processor 'citar
org-hide-leading-stars t
org-todo-keywords '((sequence "TODO(t)" "PROJ(p)" "LOOP(r)" "STRT(s)" "WAIT(w)" "HOLD(h)" "IDEA(i)" "|" "DONE(d)" "KILL(k)")
(sequence "[ ](T)" "[-](S)" "[?](W)" "|" "[X](D)") (sequence "|" "OKAY(o)" "YES(y)" "NO(n)"))
org-agenda-inhibit-startup t
org-support-shift-select t
org-blocker-hook '(org-block-todo-from-children-or-siblings-or-parent)
org-preview-latex-image-directory "/Users/apc/.emacs.d/.local/cache/org-latex/"
org-fontify-whole-heading-line t
org-speed-command-hook '(org-speed-command-activate org-babel-speed-command-activate)
org-clock-persist-file "/Users/apc/.emacs.d/.local/etc/org-clock-save.el"
org-eldoc-breadcrumb-separator " → "
org-export-backends '(md ascii html icalendar latex odt)
org-enforce-todo-dependencies t
org-confirm-babel-evaluate nil
org-clock-in-resume t
org-cite-export-processors '((latex biblatex) (t csl))
org-insert-heading-respect-content t
org-M-RET-may-split-line nil
org-clock-persist 'history
org-persist-before-write-hook '(org-element--cache-persist-before-write)
org-tab-first-hook '(+org-yas-expand-maybe-h +org-indent-maybe-h org-babel-hide-result-toggle-maybe org-babel-header-arg-expand)
org-link-shell-confirm-function 'yes-or-no-p
org-agenda-finalize-hook '(+org-exclude-agenda-buffers-from-workspace-h +org-defer-mode-in-agenda-buffers-h)
org-babel-pre-tangle-hook '(save-buffer)
org-agenda-loop-over-headlines-in-active-region nil
org-fontify-quote-and-verse-blocks t
org-agenda-start-on-weekday nil
org-attach-id-dir "/Users/apc/org/.attach/"
org-todo-keyword-faces '(("[-]" . +org-todo-active) ("STRT" . +org-todo-active) ("[?]" . +org-todo-onhold) ("WAIT" . +org-todo-onhold)
("HOLD" . +org-todo-onhold) ("PROJ" . +org-todo-project) ("NO" . +org-todo-cancel) ("KILL" . +org-todo-cancel))
org-capture-mode-hook '(+org-show-target-in-capture-header-h)
org-agenda-deadline-faces '((1.001 . error) (1.0 . org-warning) (0.5 . org-upcoming-deadline) (0.0 . org-upcoming-distant-deadline))
org-occur-hook '(org-first-headline-recenter)
org-capture-after-finalize-hook '(+org-capture-cleanup-frame-h)
org-metadown-hook '(org-babel-pop-to-session-maybe)
org-link-parameters '(("bibtex" :follow org-bibtex-open :store org-bibtex-store-link)
("pdf" :follow
(closure ((args) (fn . org-pdftools-open) t) (&rest args)
(and (condition-case nil (progn (require 'org-pdftools nil t)) (error nil)) (file-executable-p pdf-info-epdfinfo-program)
(apply fn args))
)
:complete
(closure ((args) (fn . org-pdftools-complete-link) t) (&rest args)
(and (condition-case nil (progn (require 'org-pdftools nil t)) (error nil)) (file-executable-p pdf-info-epdfinfo-program)
(apply fn args))
)
:store
(closure ((args) (fn . org-pdftools-store-link) t) (&rest args)
(and (condition-case nil (progn (require 'org-pdftools nil t)) (error nil)) (file-executable-p pdf-info-epdfinfo-program)
(apply fn args))
)
:export
(closure ((args) (fn . org-pdftools-export) t) (&rest args)
(and (condition-case nil (progn (require 'org-pdftools nil t)) (error nil)) (file-executable-p pdf-info-epdfinfo-program)
(apply fn args))
)
)
("orgit-rev" :store orgit-rev-store :follow orgit-rev-open :export orgit-rev-export :complete orgit-rev-complete-link)
("orgit-log" :store orgit-log-store :follow orgit-log-open :export orgit-log-export :complete orgit-log-complete-link)
("orgit" :store orgit-status-store :follow orgit-status-open :export orgit-status-export :complete
orgit-status-complete-link)
("yt" :follow org-yt-follow :image-data-fun org-yt-image-data-fun) ("id" :follow org-id-open)
("img" :image-data-fun +org-inline-image-data-fn)
("doom-module" :follow +org-link--doom-module-follow-fn :face +org-link--doom-module-face-fn)
("doom-package" :follow +org-link--doom-package-follow-fn :face (closure (t) (_) '(:inherit org-priority :slant italic)))
("kbd" :follow (closure (t) (_) (minibuffer-message "%s" (+org-display-link-in-eldoc-a))) :help-echo +org-read-kbd-at-point
:face help-key-binding)
("doom-modules" :complete
(closure
((dir-fn closure ((plist) (dir-var . doom-modules-dir) (key . "doom-modules") t) nil (symbol-value dir-var)) (requires)
(plist) (dir-var . doom-modules-dir) (key . "doom-modules") t)
nil (if requires (mapc #'require (doom-enlist requires)))
(+org--relative-path (+org--read-link-path key (funcall dir-fn)) (funcall dir-fn)))
:follow
(closure
((dir-fn closure ((plist) (dir-var . doom-modules-dir) (key . "doom-modules") t) nil (symbol-value dir-var)) (requires)
(plist) (dir-var . doom-modules-dir) (key . "doom-modules") t)
(link) (org-link-open-as-file (expand-file-name link (funcall dir-fn)) nil))
:face
(closure
((dir-fn closure ((plist) (dir-var . doom-modules-dir) (key . "doom-modules") t) nil (symbol-value dir-var)) (requires)
(plist) (dir-var . doom-modules-dir) (key . "doom-modules") t)
(link)
(let*
((path (expand-file-name link (funcall dir-fn))) (option-index (string-match-p "::\\(.*\\)\\'" path))
(file-name (substring path 0 option-index)))
(if (file-exists-p file-name) 'org-link 'error))
)
)
("doom-docs" :complete
(closure
((dir-fn closure ((plist) (dir-var . doom-docs-dir) (key . "doom-docs") t) nil (symbol-value dir-var)) (requires) (plist)
(dir-var . doom-docs-dir) (key . "doom-docs") t)
nil (if requires (mapc #'require (doom-enlist requires)))
(+org--relative-path (+org--read-link-path key (funcall dir-fn)) (funcall dir-fn)))
:follow
(closure
((dir-fn closure ((plist) (dir-var . doom-docs-dir) (key . "doom-docs") t) nil (symbol-value dir-var)) (requires) (plist)
(dir-var . doom-docs-dir) (key . "doom-docs") t)
(link) (org-link-open-as-file (expand-file-name link (funcall dir-fn)) nil))
:face
(closure
((dir-fn closure ((plist) (dir-var . doom-docs-dir) (key . "doom-docs") t) nil (symbol-value dir-var)) (requires) (plist)
(dir-var . doom-docs-dir) (key . "doom-docs") t)
(link)
(let*
((path (expand-file-name link (funcall dir-fn))) (option-index (string-match-p "::\\(.*\\)\\'" path))
(file-name (substring path 0 option-index)))
(if (file-exists-p file-name) 'org-link 'error))
)
)
("doom" :complete
(closure
((dir-fn closure ((plist) (dir-var . doom-emacs-dir) (key . "doom") t) nil (symbol-value dir-var)) (requires) (plist)
(dir-var . doom-emacs-dir) (key . "doom") t)
nil (if requires (mapc #'require (doom-enlist requires)))
(+org--relative-path (+org--read-link-path key (funcall dir-fn)) (funcall dir-fn)))
:follow
(closure
((dir-fn closure ((plist) (dir-var . doom-emacs-dir) (key . "doom") t) nil (symbol-value dir-var)) (requires) (plist)
(dir-var . doom-emacs-dir) (key . "doom") t)
(link) (org-link-open-as-file (expand-file-name link (funcall dir-fn)) nil))
:face
(closure
((dir-fn closure ((plist) (dir-var . doom-emacs-dir) (key . "doom") t) nil (symbol-value dir-var)) (requires) (plist)
(dir-var . doom-emacs-dir) (key . "doom") t)
(link)
(let*
((path (expand-file-name link (funcall dir-fn))) (option-index (string-match-p "::\\(.*\\)\\'" path))
(file-name (substring path 0 option-index)))
(if (file-exists-p file-name) 'org-link 'error))
)
)
("org" :complete
(closure
((dir-fn closure ((plist) (dir-var . org-directory) (key . "org") t) nil (symbol-value dir-var)) (requires) (plist)
(dir-var . org-directory) (key . "org") t)
nil (if requires (mapc #'require (doom-enlist requires)))
(+org--relative-path (+org--read-link-path key (funcall dir-fn)) (funcall dir-fn)))
:follow
(closure
((dir-fn closure ((plist) (dir-var . org-directory) (key . "org") t) nil (symbol-value dir-var)) (requires) (plist)
(dir-var . org-directory) (key . "org") t)
(link) (org-link-open-as-file (expand-file-name link (funcall dir-fn)) nil))
:face
(closure
((dir-fn closure ((plist) (dir-var . org-directory) (key . "org") t) nil (symbol-value dir-var)) (requires) (plist)
(dir-var . org-directory) (key . "org") t)
(link)
(let*
((path (expand-file-name link (funcall dir-fn))) (option-index (string-match-p "::\\(.*\\)\\'" path))
(file-name (substring path 0 option-index)))
(if (file-exists-p file-name) 'org-link 'error))
)
)
("attachment" :image-data-fun +org-inline-image-data-fn :follow org-attach-follow :complete org-attach-complete-link)
("file+sys") ("file+emacs") ("shell" :follow org-link--open-shell)
("news" :follow #[514 "\301\300\302Q\"\207" ["news" browse-url ":"] 6 "\n\n(fn URL ARG)"])
("mailto" :follow #[514 "\301\300\302Q\"\207" ["mailto" browse-url ":"] 6 "\n\n(fn URL ARG)"])
("https" :follow #[514 "\301\300\302Q\"\207" ["https" browse-url ":"] 6 "\n\n(fn URL ARG)"] :image-data-fun
+org-http-image-data-fn)
("http" :follow #[514 "\301\300\302Q\"\207" ["http" browse-url ":"] 6 "\n\n(fn URL ARG)"] :image-data-fun
+org-http-image-data-fn)
("ftp" :follow #[514 "\301\300\302Q\"\207" ["ftp" browse-url ":"] 6 "\n\n(fn URL ARG)"])
("help" :follow org-link--open-help :store org-link--store-help)
("file" :complete org-link-complete-file :face
(closure (t) (path)
(if (or (file-remote-p path) (and IS-WINDOWS (string-prefix-p "\\\\" path)) (file-exists-p path)) 'org-link
'(warning org-link))
)
)
("elisp" :follow org-link--open-elisp))
org-metaup-hook '(org-babel-load-in-session-maybe)
org-imenu-depth 6
org-display-remote-inline-images 'download
org-outline-path-complete-in-steps nil
org-special-ctrl-a/e t
org-tags-column 0
org-src-lang-modes '(("md" . markdown) ("C" . c) ("C++" . c++) ("asymptote" . asy) ("bash" . sh) ("beamer" . latex) ("calc" . fundamental)
("cpp" . c++) ("ditaa" . artist) ("dot" . fundamental) ("elisp" . emacs-lisp) ("ocaml" . tuareg) ("screen" . shell-script)
("shell" . sh) ("sqlite" . sql))
org-clock-history-length 20
org-attach-store-link-p t
org-id-locations-file-relative t
org-archive-subtree-save-file-p t
org-list-allow-alphabetical t
)
^ permalink raw reply [flat|nested] 2+ messages in thread
* Re: [BUG] Cache corruption [9.6 (9.6-??-27edae8 @ /Users/apc/.emacs.d/.local/straight/build-28.0.90/org/)]
2021-12-14 18:50 [BUG] Cache corruption [9.6 (9.6-??-27edae8 @ /Users/apc/.emacs.d/.local/straight/build-28.0.90/org/)] Alejandro Pérez Carballo
@ 2021-12-15 10:59 ` Ihor Radchenko
0 siblings, 0 replies; 2+ messages in thread
From: Ihor Radchenko @ 2021-12-15 10:59 UTC (permalink / raw)
To: Alejandro Pérez Carballo; +Cc: emacs-orgmode
Alejandro Pérez Carballo <apc@umass.edu> writes:
> I was simply navigating an org file after installing emacs 28 and doom.
> I got the message below and was asked to submit. So here I am.
Thanks for reporting! Note that your Org is 1 month old. Can you update
to more recent version? Since then, I have pushed some commits that
resolve some of the cache issues.
Also, if you happen to see the warning again after the update, can you
also post the full warning text?
Best,
Ihor
^ permalink raw reply [flat|nested] 2+ messages in thread
end of thread, other threads:[~2021-12-15 11:43 UTC | newest]
Thread overview: 2+ messages (download: mbox.gz follow: Atom feed
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2021-12-14 18:50 [BUG] Cache corruption [9.6 (9.6-??-27edae8 @ /Users/apc/.emacs.d/.local/straight/build-28.0.90/org/)] Alejandro Pérez Carballo
2021-12-15 10:59 ` Ihor Radchenko
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