From: Richard Stanton <stanton@haas.berkeley.edu>
To: John Kitchin <jkitchin@andrew.cmu.edu>
Cc: Kyle Meyer <kyle@kyleam.com>, emacs-orgmode@gnu.org
Subject: Re: Extraneous output from Python code blocks using :session option
Date: Thu, 12 Mar 2015 08:34:01 -0700 [thread overview]
Message-ID: <210D96E7-43E3-4438-8401-7841C6612023@haas.berkeley.edu> (raw)
In-Reply-To: <m2lhj22qk0.fsf@andrew.cmu.edu>
This looks great. While we're patching this code, why does having blank lines inside function definitions cause such problems in :session mode? It would be nice if you could just type any valid Python code and have it execute (like you can in an IPython notebook cell)
> On Mar 12, 2015, at 8:17 AM, John Kitchin <jkitchin@andrew.cmu.edu> wrote:
>
> Nice. I hope this makes it into org-mode one day.
>
> In the mean time, I crafted an approach with another hook function that
> is described here:
>
> http://kitchingroup.cheme.cmu.edu/blog/2015/03/12/Making-org-mode-Python-sessions-look-better/
>
> This can be done in an init file.
>
> Kyle Meyer writes:
>
>> Richard Stanton <stanton@haas.berkeley.edu> wrote:
>>> I'm trying to use the :session option so I can import modules, etc.,
>>> just once at the beginning of my document, like with am IPython
>>> notebook. Unfortunately, the output from these code blocks contains
>>> some extraneous characters. For example:
>>>
>>> #+BEGIN_SRC python :session :results output
>>> a = 2
>>> b = 3
>>> c = 4
>>> print 'a= ', a
>>> print 'b = ', b
>>> print 'a + b = ', a+b
>>> #+END_SRC
>>>
>>> #+RESULTS:
>>> :
>>> : >>> >>> a= 2
>>> : b = 3
>>> : a + b = 5
>>
>> I also see this behavior. I asked the list some time ago [1], but I
>> didn't follow up beyond the initial email.
>>
>>> How can I stop the production of all those ">" signs (sometimes
>>> they're dots), which don't appear if I run the same code block without
>>> the :session option?
>>
>> I've attached a patch that seems to fix the example you gave and the
>> cases from my earlier email. I don't know enough about babel's
>> internals to know if it is a good way to fix it, but at least it might
>> serve as a quick fix for you until there is a better solution.
>>
>> [1] http://thread.gmane.org/gmane.emacs.orgmode/79014
>
> --
> Professor John Kitchin
> Doherty Hall A207F
> Department of Chemical Engineering
> Carnegie Mellon University
> Pittsburgh, PA 15213
> 412-268-7803
> @johnkitchin
> http://kitchingroup.cheme.cmu.edu
next prev parent reply other threads:[~2015-03-12 15:34 UTC|newest]
Thread overview: 12+ messages / expand[flat|nested] mbox.gz Atom feed top
2015-03-11 3:38 Extraneous output from Python code blocks using :session option Richard Stanton
2015-03-11 18:29 ` Kyle Meyer
2015-03-11 18:54 ` Richard Stanton
2015-03-12 15:17 ` John Kitchin
2015-03-12 15:34 ` Richard Stanton [this message]
2015-03-12 21:23 ` Kyle Meyer
2015-03-13 6:58 ` Kyle Meyer
2015-03-13 8:21 ` Nicolas Goaziou
2015-03-13 14:40 ` Kyle Meyer
2015-03-14 8:26 ` Nicolas Goaziou
2015-03-16 0:40 ` Kyle Meyer
2015-03-12 21:21 ` Kyle Meyer
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