I keep this report open as I am still affected by the issue.

There was one question specifically targeting me:

> What if you delete the body of the function

> `pgtk_toolkit_position' within pgtkterm.c?

Sorry, I can't build Emacs myself.

However I can only ascertain that:

I am on Gnome 45 (as of recent) using Wayland and pgtk-build of Emacs 29.1 by Arch distribution. The issue shows also when running emacs -Q.

Am Mo., 23. Okt. 2023 um 22:04 Uhr schrieb Stefan Kangas <stefankangas@gmail.com>:

Eli Zaretskii <eliz@gnu.org> writes:

>> From: Johann Höchtl <johann.hoechtl@gmail.com>
>> Date: Sun, 10 Sep 2023 18:55:23 +0200
>> Cc: Eli Zaretskii <eliz@gnu.org>, 65829@debbugs.gnu.org
>>
>> Also note that I did use An Emacs 30.0.50 pgtk-build with aot for maybe more than a year and did
>> not have this issue. I have this issue after switching to the officially released Emacs 29.1.
>
> I don't understand how you could be using Emacs 30.050 for more than a
> year, when Emacs 30 didn't exist before 28 Nov 2022. And almost all
> the changes installed in Emacs 29 are also present in Emacs 30. Are
> you sure you aren't misremembering? Could it be that the cause was
> some update in one of the system components used to build Emacs?

More information was requested, but none was given within 6 weeks, so
I'm closing this bug. If this is still an issue, please reply to this
email (use "Reply to all" in your email client) and we can reopen the
bug report.